Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H20
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 303 2e-82
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 303 2e-82
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 303 2e-82
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 303 2e-82
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 299 5e-81
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 91 4e-18
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 44 3e-04
AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP respons... 31 3.1
AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B p... 31 3.1
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr... 31 3.1
AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein pr... 31 3.1
AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-... 31 3.1
AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein. 31 3.1
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 4.1
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 4.1
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 4.1
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 4.1
BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2 prot... 31 4.1
L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein. 29 9.5
AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein pro... 29 9.5
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 303 bits (745), Expect = 2e-82
Identities = 143/160 (89%), Positives = 152/160 (95%)
Frame = +1
Query: 109 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 288
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 289 VERLTNSLMMHGRNNGKKLIAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 468
VERLTNS+MMHGRNNGKKL+ VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 469 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 588
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 168
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 303 bits (745), Expect = 2e-82
Identities = 143/160 (89%), Positives = 152/160 (95%)
Frame = +1
Query: 109 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 288
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 289 VERLTNSLMMHGRNNGKKLIAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 468
VERLTNS+MMHGRNNGKKL+ VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 469 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 588
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 168
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 303 bits (745), Expect = 2e-82
Identities = 143/160 (89%), Positives = 152/160 (95%)
Frame = +1
Query: 109 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 288
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 289 VERLTNSLMMHGRNNGKKLIAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 468
VERLTNS+MMHGRNNGKKL+ VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 469 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 588
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 168
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 303 bits (745), Expect = 2e-82
Identities = 143/160 (89%), Positives = 152/160 (95%)
Frame = +1
Query: 109 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 288
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 289 VERLTNSLMMHGRNNGKKLIAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 468
VERLTNS+MMHGRNNGKKL+ VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 469 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 588
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 168
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 299 bits (734), Expect = 5e-81
Identities = 141/160 (88%), Positives = 150/160 (93%)
Frame = +1
Query: 109 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 288
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 289 VERLTNSLMMHGRNNGKKLIAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 468
VERLTNS+MMHGRNNGKKL+ VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 469 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 588
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKT 168
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 90.6 bits (215), Expect = 4e-18
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +1
Query: 274 AQCPIVERLTNSLMMHGRNNGKKLIAVRIVKHAFEIIHLLTGENPLQVLVTA 429
AQCPIVERLTNS+MMHGRNNGKKL+ VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 532 AIWLLCTGAREAAFRNIKT 588
AIWLLCTGAREAAFRNIKT
Sbjct: 1 AIWLLCTGAREAAFRNIKT 19
>AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP response
element binding and betadogene protein.
Length = 2295
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 HEGKLRIKV*NMAEENWTEEVADAGGMVV---DNMPLPQPADIPE 132
H+GK I+ N E NW ++ + ++ D+ P QP D+ E
Sbjct: 1328 HDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVE 1372
>AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B
protein.
Length = 2269
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 HEGKLRIKV*NMAEENWTEEVADAGGMVV---DNMPLPQPADIPE 132
H+GK I+ N E NW ++ + ++ D+ P QP D+ E
Sbjct: 1302 HDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVE 1346
>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
protein.
Length = 2320
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 HEGKLRIKV*NMAEENWTEEVADAGGMVV---DNMPLPQPADIPE 132
H+GK I+ N E NW ++ + ++ D+ P QP D+ E
Sbjct: 1302 HDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVE 1346
>AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein
protein.
Length = 2269
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 HEGKLRIKV*NMAEENWTEEVADAGGMVV---DNMPLPQPADIPE 132
H+GK I+ N E NW ++ + ++ D+ P QP D+ E
Sbjct: 1302 HDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVE 1346
>AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-form2
protein.
Length = 2199
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 HEGKLRIKV*NMAEENWTEEVADAGGMVV---DNMPLPQPADIPE 132
H+GK I+ N E NW ++ + ++ D+ P QP D+ E
Sbjct: 1302 HDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVE 1346
>AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein.
Length = 2269
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 HEGKLRIKV*NMAEENWTEEVADAGGMVV---DNMPLPQPADIPE 132
H+GK I+ N E NW ++ + ++ D+ P QP D+ E
Sbjct: 1302 HDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVE 1346
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 190 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 333
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 190 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 333
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 190 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 333
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 190 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 333
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2
protein.
Length = 380
Score = 30.7 bits (66), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 41 WLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKS 136
++ +TGPKK P + W CH RL++ K+
Sbjct: 261 FMEKTGPKKEPFKKRWFALDCH-ERRLLYYKN 291
>L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein.
Length = 622
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 305 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 210
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 406 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 437
>AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein
protein.
Length = 1029
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 305 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 210
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 800 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,703,995
Number of Sequences: 237096
Number of extensions: 1996921
Number of successful extensions: 7919
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7919
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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