Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H13
(436 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal pr... 96 2e-20
U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal prot... 96 2e-20
BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p pro... 96 2e-20
AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p pro... 96 2e-20
AL132792-4|CAB60023.1| 299|Drosophila melanogaster EG:BACR19J1.... 96 2e-20
AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA ... 96 2e-20
AY089455-1|AAL90193.1| 312|Drosophila melanogaster AT26853p pro... 58 4e-09
AE013599-3561|AAF46972.1| 312|Drosophila melanogaster CG9871-PA... 58 4e-09
>AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal
protein L22 protein.
Length = 312
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGKG K++ ++L + CT+ AEDSI+DV +FEKY+K R+ V GK NNLGN+V R K
Sbjct: 192 LRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK 251
Query: 297 TKVAINADIPFSQRYLKYL 353
K+ +++D+ FS+ YLKYL
Sbjct: 252 LKLTVSSDVHFSKAYLKYL 270
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTK+YL+KN+LRDW+RVVA
Sbjct: 270 LTKKYLKKNSLRDWIRVVA 288
>U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal protein
Rpl22 protein.
Length = 299
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGKG K++ ++L + CT+ AEDSI+DV +FEKY+K R+ V GK NNLGN+V R K
Sbjct: 179 LRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK 238
Query: 297 TKVAINADIPFSQRYLKYL 353
K+ +++D+ FS+ YLKYL
Sbjct: 239 LKLIVSSDVHFSKAYLKYL 257
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTK+YL+KN+LRDW+RVVA
Sbjct: 257 LTKKYLKKNSLRDWIRVVA 275
>BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p
protein.
Length = 299
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGKG K++ ++L + CT+ AEDSI+DV +FEKY+K R+ V GK NNLGN+V R K
Sbjct: 179 LRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK 238
Query: 297 TKVAINADIPFSQRYLKYL 353
K+ +++D+ FS+ YLKYL
Sbjct: 239 LKLIVSSDVHFSKAYLKYL 257
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTK+YL+KN+LRDW+RVVA
Sbjct: 257 LTKKYLKKNSLRDWIRVVA 275
>AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p
protein.
Length = 299
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGKG K++ ++L + CT+ AEDSI+DV +FEKY+K R+ V GK NNLGN+V R K
Sbjct: 179 LRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK 238
Query: 297 TKVAINADIPFSQRYLKYL 353
K+ +++D+ FS+ YLKYL
Sbjct: 239 LKLIVSSDVHFSKAYLKYL 257
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTK+YL+KN+LRDW+RVVA
Sbjct: 257 LTKKYLKKNSLRDWIRVVA 275
>AL132792-4|CAB60023.1| 299|Drosophila melanogaster
EG:BACR19J1.4,FBgn0015288;RpL22 protein.
Length = 299
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGKG K++ ++L + CT+ AEDSI+DV +FEKY+K R+ V GK NNLGN+V R K
Sbjct: 179 LRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK 238
Query: 297 TKVAINADIPFSQRYLKYL 353
K+ +++D+ FS+ YLKYL
Sbjct: 239 LKLIVSSDVHFSKAYLKYL 257
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTK+YL+KN+LRDW+RVVA
Sbjct: 257 LTKKYLKKNSLRDWIRVVA 275
>AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA
protein.
Length = 299
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGKG K++ ++L + CT+ AEDSI+DV +FEKY+K R+ V GK NNLGN+V R K
Sbjct: 179 LRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK 238
Query: 297 TKVAINADIPFSQRYLKYL 353
K+ +++D+ FS+ YLKYL
Sbjct: 239 LKLIVSSDVHFSKAYLKYL 257
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTK+YL+KN+LRDW+RVVA
Sbjct: 257 LTKKYLKKNSLRDWIRVVA 275
>AY089455-1|AAL90193.1| 312|Drosophila melanogaster AT26853p
protein.
Length = 312
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGK ++ + C AED ILD+ +FE+YLK + ++ K N L + V R K
Sbjct: 180 LRGKRLAKKKAWQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTK 239
Query: 297 T-KVAINADIPFSQRYLKYL 353
+ I++ + FS+RY KYL
Sbjct: 240 NFSLIIHSGVHFSKRYFKYL 259
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTKRYL+K +LRDWLRVV+
Sbjct: 259 LTKRYLKKVSLRDWLRVVS 277
>AE013599-3561|AAF46972.1| 312|Drosophila melanogaster CG9871-PA
protein.
Length = 312
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 117 IRGKGAKREDLALNLPLTCTHPAEDSILDVGNFEKYLKERVTVEGKTNNLGNHVVIARDK 296
+RGK ++ + C AED ILD+ +FE+YLK + ++ K N L + V R K
Sbjct: 180 LRGKRLAKKKAWQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTK 239
Query: 297 T-KVAINADIPFSQRYLKYL 353
+ I++ + FS+RY KYL
Sbjct: 240 NFSLIIHSGVHFSKRYFKYL 259
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 352 LTKRYLRKNNLRDWLRVVA 408
LTKRYL+K +LRDWLRVV+
Sbjct: 259 LTKRYLKKVSLRDWLRVVS 277
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,150,545
Number of Sequences: 53049
Number of extensions: 442176
Number of successful extensions: 1270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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