Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H10
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   0.59 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.4  
AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450 pr...    25   1.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   2.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   4.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.5  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   5.5  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   5.5  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    22   9.6  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 0.59
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +1

Query: 196 RDGSLYYSFDIGPIHFVSISTEVYYFTQYGLKLIVNQYEWLKEDLSRANTPEKRSQ 363
           RD S YY+ D   +HF  +S       Q+G+ L  N++  L+ ++      + ++Q
Sbjct: 179 RDNSSYYTIDNKRVHFKEVSK---LLKQHGIDLDHNRFLILQGEVESIAMMKSKAQ 231


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -2

Query: 479 VSKPYMPKMPVRVYSTLQSIS-FELLQYMGRCPNTTTQGRCDLFSGVLALDKSSLSHSY 306
           + +P    + +R Y++LQSI+ F   +    C   T Q  C   +  L     +LS+ +
Sbjct: 13  LDRPKTTVLHLRTYTSLQSIAFFSTRRSSAHCTQQTRQASCSDNAAQLTYRLPALSNRH 71


>AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 190 PGRDGSLYYSFDIGPIHFVSISTEVYYFTQYGLKLIVNQYEW 315
           P  D   YY F +GP + + +   +   ++ GL L+++++++
Sbjct: 39  PNYDPDAYYPFGLGPRNCIGLRQGI-MLSKIGLVLMLSRFDF 79


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 40  AYDMDTDDARVGDEFMRQIQPLAALVPYMTCPGNH 144
           A + + +  R+G   + ++Q  AA  P MT  G H
Sbjct: 172 ALERELETYRMGARSVIELQQQAAAAPMMTAQGAH 206


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 159  LQQLCEPVQHARSGRQLVLQLRYRTDTL 242
            L+ L +P Q  +SG  L  +L+ + DTL
Sbjct: 990  LKNLSDPDQIKKSGDSLAKELQSKLDTL 1017


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 370 WVVVFGHRPMYCSNSNDIDCSVEYTRTGIF 459
           WV+V   R MY  N N   C    +RTG F
Sbjct: 565 WVIV-ALRQMYDYNQNGESCYRLMSRTGDF 593


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 358 TSFQECWLW 332
           T+FQE WLW
Sbjct: 627 TNFQESWLW 635


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 135 WKPRAGLQLQQLCEPVQHARSGRQLVLQLRYRT-DTLC 245
           W+   G Q  ++C P+ HA+    L+++LR +   T+C
Sbjct: 358 WQLSDGTQRARVCLPLAHAK----LIIRLRLKVLYTMC 391


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 107 ARGWICLMNSSPTLASS 57
           A G ICL+ ++PT AS+
Sbjct: 11  ALGVICLLQTTPTSAST 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,134
Number of Sequences: 2352
Number of extensions: 9818
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)