Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H10
(483 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 0.98
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 2.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.9
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 21 6.9
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 21 6.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.9
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 9.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.1
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.8 bits (49), Expect = 0.98
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 154 YNFSNYANRFSMPGRDGSLYYSFDIGPIHFVSISTEVYY 270
YN++N +++ + LYY I I + + VYY
Sbjct: 322 YNYNNNNYKYNYNNYNKKLYYKNYIINIEQIPVPVPVYY 360
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 173 RTGSACPVGTAACTTASISDR 235
R+ S C +GTA+ T+++ S R
Sbjct: 171 RSVSECSLGTASSTSSTASSR 191
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 317 SHSYWLTMSLSPYWV 273
SHS LT+++ P W+
Sbjct: 668 SHSTTLTVNVPPRWI 682
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 321 LEPLILVDDELEPILG 274
LE + +DDELE I G
Sbjct: 120 LEKMKFLDDELEKIAG 135
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 321 LEPLILVDDELEPILG 274
LE + +DDELE I G
Sbjct: 120 LEKMKFLDDELEKIAG 135
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 6.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 140 TTSRPTTSATMRTGSACPVGTAACTTAS 223
+TS P T T T + TAA T +
Sbjct: 100 STSLPATITTTTTTTTTTTATAAATATT 127
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 9.1
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +1
Query: 199 DGSLYYSFDIGPIHFVSISTEVYYFTQYGLKLIVNQYEWLKEDL 330
+GS+ YS I ++ ++Y + L + Y W +DL
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 9.1
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +1
Query: 199 DGSLYYSFDIGPIHFVSISTEVYYFTQYGLKLIVNQYEWLKEDL 330
+GS+ YS I ++ ++Y + L + Y W +DL
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 20.6 bits (41), Expect = 9.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 326 SSLSHSYWLTMSLSPYW 276
S ++ Y +TM L+ YW
Sbjct: 76 SEVNMDYTITMYLNQYW 92
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 9.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 235 SVRYRSCSTSCRPDR 191
S Y+S +SC PD+
Sbjct: 961 SFLYKSSESSCNPDQ 975
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 9.1
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 326 SSLSHSYWLTMSLSPYWVK**TSVDIE 246
+ +SH+ L + + P W+ T V +E
Sbjct: 692 AEVSHTQRLVVHVPPRWIVEPTDVSVE 718
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,259
Number of Sequences: 438
Number of extensions: 2916
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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