Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H09
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0469 - 23178589-23178755,23179529-23179697,23179836-231799... 35 0.036
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 33 0.15
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 31 0.59
03_02_0577 - 9590096-9590432,9590680-9590750,9590890-9590983,959... 30 1.4
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 2.4
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 2.4
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 28 4.2
07_03_0963 + 22949898-22949985,22950295-22950364,22951204-229512... 28 5.5
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468 27 7.3
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 27 7.3
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 27 7.3
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 27 9.7
03_05_0900 + 28627221-28629536 27 9.7
>02_04_0469 -
23178589-23178755,23179529-23179697,23179836-23179919,
23180495-23180647,23180798-23180950,23182488-23182589
Length = 275
Score = 35.1 bits (77), Expect = 0.036
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Frame = +2
Query: 5 EAQKEISSAM-EYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEKLENEARNI 181
EA+KE + + + K + ++ KQ VD + E +L +L ++ + +
Sbjct: 40 EAEKEAARQLVQQKKKDRALIALKKKKAQEELLKQ-VDTWQMNVEQQLSDIELASKQKAV 98
Query: 182 RDIADKAFNTSL--VANKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALK 355
D KA N +L + N+I D + K + + E + +E+NAA G+ S +
Sbjct: 99 FDSL-KAGNAALKSIQNEINIDDVQKLMDDTAEAKAYQDEINAALGEQLSAED------- 150
Query: 356 RAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLI 508
+ V E L A++ LPD + ++ + + + A D+D +I
Sbjct: 151 -EEAVMAEFENLEAQLAVESLPDAPVTEVRPEEKSETPAVTEAAEDIDEVI 200
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 33.1 bits (72), Expect = 0.15
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +2
Query: 131 KESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAA- 307
KE LL+E LEN + ++ ++ L+ NKI K+ + +N+ EV LT +L++
Sbjct: 990 KEQSLLSE-LENIFQEHKEHEERIDRVHLLLNKIEKEKTVELSNLEREVISLTAQLSSTE 1048
Query: 308 ----SGKLSSINELADQALKRAKV 367
S L +I E++ +AK+
Sbjct: 1049 EERESSTLDTIREVSILRADKAKL 1072
>01_05_0740 -
24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 31.1 bits (67), Expect = 0.59
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 107 SVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANK-IAK-DGITKQANISNEVQ 280
SV + A+ E ++A LE IR D N L +K I K + QA + ++
Sbjct: 441 SVLVQAMCLEKLVIAPDLEI----IRKYIDDGMNALLFPSKNIGKLTQVLLQAVSNGKIS 496
Query: 281 ILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTL 415
+L ++ A++GK+ + N +A + ++ V+ E + AEV T L
Sbjct: 497 VLGQKI-ASAGKVHAKNLMASETIEGYAVLLENVIKFPAEVLTPL 540
>03_02_0577 -
9590096-9590432,9590680-9590750,9590890-9590983,
9591070-9591137,9591230-9591296,9591436-9591566,
9591774-9591847,9592017-9592092,9594082-9594147,
9595432-9595498,9595785-9595861,9596701-9596806,
9596906-9596979,9597587-9597682,9597781-9597972,
9598051-9598200
Length = 581
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 104 QSVDMSALAKESRLLAE--KLENEARNIRDIADKAFNTSLVANKIAKD-GITKQANISNE 274
+S S +K S+ +AE KL+ + ++ + A KA ++ N++ K+ + + +NE
Sbjct: 190 RSNSTSRRSKASQTVAEVNKLKVLSESLANSAAKA-ERRIMENRLQKEESLIFRVTKTNE 248
Query: 275 VQILTNELNAASGKLSSINELADQALKRAKVVYE 376
V + E+ A L +L + LK+ VYE
Sbjct: 249 VSVTEKEILAEISGLQKQKDLLEDELKKCWSVYE 282
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 224 NKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
+K AK I ++++ NE+N + + SS+ A Q L+RA+ EAL
Sbjct: 182 HKRAKQRIQDIQKEKDDMEARFNEINQKAEQASSLQSAAQQELERARQQASEAL 235
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.1 bits (62), Expect = 2.4
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +2
Query: 152 EKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSIN 331
++LENE R+ AD N L +++ + KQA+ E++ NELN + N
Sbjct: 579 QRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELNRKMDFVE--N 636
Query: 332 ELADQA-LKRAKV--VYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTID 478
EL A L +K+ + E L E L+ D +KL D + R ID
Sbjct: 637 ELKRAAELNESKIQKILLEKKQLQKE-KEVLVED--RQKLETDKADIRRDID 685
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 347 PDQPARLYCLTYLKLRSAHSLISVLHCLCW 258
P+ P LY + K + S SVL C+CW
Sbjct: 621 PELPLTLYFIRMYKRYNRASYNSVLSCVCW 650
>07_03_0963 +
22949898-22949985,22950295-22950364,22951204-22951270,
22951361-22951456,22951796-22951893,22951921-22952089,
22952899-22952940,22953967-22954023,22954116-22954166,
22954284-22954340,22954522-22954539
Length = 270
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +2
Query: 125 LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNA 304
LAK LAE+ + RNIR A KA++ K+++D + ++S ++Q +T+E
Sbjct: 198 LAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNV---KDLSADLQKVTDEY-- 252
Query: 305 ASGKLSSINELADQALKR 358
K+ +I + +Q L +
Sbjct: 253 -MKKIEAIQKQKEQELMK 269
>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
Length = 1078
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 275 VQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDS 454
V++LT E A+ G+ ++++ +A+ + V LG+ TTL I + EDS
Sbjct: 178 VEVLTKEEKASGGESNNVHVVANSDTESNNVTVVAILGIGGIGKTTLAKKIYSDQAVEDS 237
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 329 LYCLTYLKLRSAHSLISVLHCLCWL 255
L CL+YL + I V+ CLCW+
Sbjct: 341 LSCLSYLSAGGVIASILVVVCLCWV 365
>01_06_1763 +
39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 27.5 bits (58), Expect = 7.3
Identities = 33/138 (23%), Positives = 57/138 (41%)
Frame = +2
Query: 83 RSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQAN 262
+ D F + L KE L LE + +A + S + +K + +N
Sbjct: 405 KDDDFAALEQLIEDLTKEKFALQRTLEKSQELAQTLAT---DNSALTDKFNQQAQVI-SN 460
Query: 263 ISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKL 442
++++++ L NE+ A L S+ A E A L AEV LL D LR L
Sbjct: 461 LTSDMERLQNEIQAQLLALESVRTEYANAQLECNAADERAKVLAAEV--ILLEDKALR-L 517
Query: 443 HEDSLGMNRTIDDKAADL 496
L + + I+ ++++
Sbjct: 518 RSSELKLEKEIEGLSSEI 535
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 140 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 319
++L+E+L + +IR D S K+A++ + E+ L +LNAA+ K
Sbjct: 63 KVLSERLSSAVLDIRAKDDLVKQHS----KVAEEAVLGWEKAEKEIASLKTQLNAATAKN 118
Query: 320 SSINE 334
S++ +
Sbjct: 119 STLED 123
>03_05_0900 + 28627221-28629536
Length = 771
Score = 27.1 bits (57), Expect = 9.7
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +2
Query: 197 KAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRA----K 364
KA + ++++K G+ + N L N+L A GK+ N L +Q + R
Sbjct: 660 KAEVAGSIISELSKKGVYMDIVMYNT---LINQLGKA-GKVDEANSLLEQIIGRGIKPDV 715
Query: 365 VVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIA*KRR 523
V + + + A+ D LRK+ + + N + LD+ I KR+
Sbjct: 716 VTFNTLININAKAGRLKEADKYLRKMIAEGIAPNYATETILVFLDKEIEKKRQ 768
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,439,139
Number of Sequences: 37544
Number of extensions: 189039
Number of successful extensions: 653
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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