Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H09
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 62 3e-10
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 34 0.058
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 34 0.058
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 34 0.058
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 0.54
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.54
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 31 0.54
AF067936-8|AAC19209.1| 213|Caenorhabditis elegans Synapsis in m... 29 1.6
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 29 2.9
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 29 2.9
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 29 2.9
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 29 2.9
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 28 3.8
Z46996-2|CAA87102.1| 679|Caenorhabditis elegans Hypothetical pr... 28 5.0
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 28 5.0
U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid... 28 5.0
U42832-1|AAV28357.1| 442|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 27 8.7
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 8.7
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 8.7
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 8.7
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/152 (26%), Positives = 68/152 (44%)
Frame = +2
Query: 8 AQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRD 187
A++EI + + Y A N S ++G+QS MS LA +R AEK +A I
Sbjct: 1144 ARREIENVLHYLETEGEERAQIAYNASQKYGEQSKRMSELASGTREEAEKHLKQASEIEQ 1203
Query: 188 IADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRAKV 367
++++A + ANK A D I IS ++ L + N + + +LA++ K A
Sbjct: 1204 LSEQAIANATQANKEASDAIYGGEQISKQIAELKEKQNQLNESIHRTLDLAEEQKKSADE 1263
Query: 368 VYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
A V +P + ++L D G+
Sbjct: 1264 ANNLAAVSLTNVEAVKIPSVDPKELRNDVAGV 1295
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 34.3 bits (75), Expect = 0.058
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +2
Query: 140 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 319
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 1698 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 1755
Query: 320 SSINELADQALKRAKVVYEE 379
+ E A +A A + EE
Sbjct: 1756 KASEERARKAAADADRLAEE 1775
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 34.3 bits (75), Expect = 0.058
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +2
Query: 140 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 319
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 1698 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 1755
Query: 320 SSINELADQALKRAKVVYEE 379
+ E A +A A + EE
Sbjct: 1756 KASEERARKAAADADRLAEE 1775
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 34.3 bits (75), Expect = 0.058
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +2
Query: 140 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 319
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 1698 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 1755
Query: 320 SSINELADQALKRAKVVYEE 379
+ E A +A A + EE
Sbjct: 1756 KASEERARKAAADADRLAEE 1775
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.1 bits (67), Expect = 0.54
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +2
Query: 89 DQFGKQSVDMSALAKESRLLAEKLEN--EARNIRDIADKAFNTSLVANKIAKDGITKQAN 262
D+ + D+++L +E L AEK+ + EA ++ KA N + + I KDG +++
Sbjct: 53 DEINRLKSDVNSLKRE--LEAEKIASNAEAARLKSELQKAKNE--IQDSI-KDGDSEKDA 107
Query: 263 ISNEVQILTNELNAASGKLSSINELADQALKRAKVVYE-EALGLYAE 400
+ E++ L +LN + L S+ + K K+ E E L L E
Sbjct: 108 MEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLKVE 154
Score = 31.1 bits (67), Expect = 0.54
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Frame = +2
Query: 86 SDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANI 265
+D+FG +++L +E+R E+ + NIR + D+ + +D IT+ N
Sbjct: 460 ADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQ--------HQDAITEWKNR 511
Query: 266 SNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPD------I 427
+ + + + N SS ++ L+ K EEAL + + + +
Sbjct: 512 AEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRV 571
Query: 428 KLRKLHEDSLGMNRTID---DKAADLDRLIA*KRRHSERIR 541
R++ E S+ +R I +K L R + RR E+++
Sbjct: 572 MKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQ 612
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.1 bits (67), Expect = 0.54
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +2
Query: 89 DQFGKQSVDMSALAKESRLLAEKLEN--EARNIRDIADKAFNTSLVANKIAKDGITKQAN 262
D+ + D+++L +E L AEK+ + EA ++ KA N + + I KDG +++
Sbjct: 53 DEINRLKSDVNSLKRE--LEAEKIASNAEAARLKSELQKAKNE--IQDSI-KDGDSEKDA 107
Query: 263 ISNEVQILTNELNAASGKLSSINELADQALKRAKVVYE-EALGLYAE 400
+ E++ L +LN + L S+ + K K+ E E L L E
Sbjct: 108 MEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLKVE 154
Score = 31.1 bits (67), Expect = 0.54
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Frame = +2
Query: 86 SDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANI 265
+D+FG +++L +E+R E+ + NIR + D+ + +D IT+ N
Sbjct: 460 ADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQ--------HQDAITEWKNR 511
Query: 266 SNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPD------I 427
+ + + + N SS ++ L+ K EEAL + + + +
Sbjct: 512 AEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRV 571
Query: 428 KLRKLHEDSLGMNRTID---DKAADLDRLIA*KRRHSERIR 541
R++ E S+ +R I +K L R + RR E+++
Sbjct: 572 MKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQ 612
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 31.1 bits (67), Expect = 0.54
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 140 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 319
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 207 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 264
Query: 320 SSINELA 340
+ E A
Sbjct: 265 KASEERA 271
>AF067936-8|AAC19209.1| 213|Caenorhabditis elegans Synapsis in
meiosis abnormal protein2 protein.
Length = 213
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 86 SDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKI-AKDGITKQAN 262
SDQ KQS + +L +++ L EK N ++ + + D + S N + A I A
Sbjct: 123 SDQMEKQSKKLISLEGKTKELVEKANNWSKTLENRVDARSHHSTCLNDVQAAIKIINNAK 182
Query: 263 ISNE 274
I+N+
Sbjct: 183 INND 186
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 107 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI 283
++D + A+E R + EKLE +RD K T +K A++ ++ + E +
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK-AQEDLSAATSKLEEKEK 76
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
E A L+ L ++ L+RA+ + A E + ++RK+ E
Sbjct: 77 TVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVME----- 131
Query: 464 NRTIDDK 484
NR++ D+
Sbjct: 132 NRSLQDE 138
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 132 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 185
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 186 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 225
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 107 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI 283
++D + A+E R + EKLE +RD K T +K A++ ++ + E +
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK-AQEDLSAATSKLEEKEK 76
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
E A L+ L ++ L+RA+ + A E + ++RK+ E
Sbjct: 77 TVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVME----- 131
Query: 464 NRTIDDK 484
NR++ D+
Sbjct: 132 NRSLQDE 138
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 132 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 185
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 186 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 225
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 107 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI 283
++D + A+E R + EKLE +RD K T +K A++ ++ + E +
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK-AQEDLSAATSKLEEKEK 76
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
E A L+ L ++ L+RA+ + A E + ++RK+ E
Sbjct: 77 TVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVME----- 131
Query: 464 NRTIDDK 484
NR++ D+
Sbjct: 132 NRSLQDE 138
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 132 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 185
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 186 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 225
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 107 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI 283
++D + A+E R + EKLE +RD K T +K A++ ++ + E +
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK-AQEDLSAATSKLEEKEK 76
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
E A L+ L ++ L+RA+ + A E + ++RK+ E
Sbjct: 77 TVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVME----- 131
Query: 464 NRTIDDK 484
NR++ D+
Sbjct: 132 NRSLQDE 138
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 132 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 185
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 186 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 225
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 107 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI 283
++D + A+E R + EKLE +RD K T +K A++ ++ + E +
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK-AQEDLSAATSKLEEKEK 76
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
E A L+ L ++ L+RA+ + A E + ++RK+ E
Sbjct: 77 TVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVME----- 131
Query: 464 NRTIDDK 484
NR++ D+
Sbjct: 132 NRSLQDE 138
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 132 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 185
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 186 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 225
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 107 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI 283
++D + A+E R + EKLE +RD K T +K A++ ++ + E +
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK-AQEDLSAATSKLEEKEK 76
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
E A L+ L ++ L+RA+ + A E + ++RK+ E
Sbjct: 77 TVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVME----- 131
Query: 464 NRTIDDK 484
NR++ D+
Sbjct: 132 NRSLQDE 138
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 132 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 185
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 186 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 225
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/102 (27%), Positives = 51/102 (50%)
Frame = +2
Query: 80 NRSDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA 259
NRS Q +++ + A KE++LLAE+ + R ++A K ++V + + +A
Sbjct: 41 NRSLQDEERANTVEAQLKEAQLLAEEAD---RKYDEVARK---LAMVEADLERAEERAEA 94
Query: 260 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 385
N++ L EL L S+ ++AL+R + YEE +
Sbjct: 95 G-ENKIVELEEELRVVGNNLKSLEVSEEKALQR-EDSYEEQI 134
>Z46996-2|CAA87102.1| 679|Caenorhabditis elegans Hypothetical
protein C34C12.2 protein.
Length = 679
Score = 27.9 bits (59), Expect = 5.0
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +2
Query: 125 LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNE-VQILTNELN 301
L KE L EKL I+ + + N K+ K+ K++ ISN+ +Q+ +
Sbjct: 207 LEKEKAALTEKLTMREDEIKVFSVEFVNIQKENVKLMKENKAKESQISNQSIQVRNSWKF 266
Query: 302 AASGKLSSINELADQALKRAKV-VYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTID 478
A K D + + K+ E+ +G+ + PD+KL + SL +RT D
Sbjct: 267 ADLFKKELQKSRKDVSEVKWKIDKIEKKVGI-KKPTPRKKPDVKLINPEDISLMSDRTQD 325
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/101 (18%), Positives = 48/101 (47%)
Frame = +2
Query: 152 EKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSIN 331
E L+ + ++ +++AFN +++A+ + + + + + ++++ L S
Sbjct: 521 ESLKKMIQVVKRTSEQAFNQAVMASGAENEIEMQNMKLRSLLSTKRDQISTLRTVLKSNK 580
Query: 332 ELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDS 454
A+ AL + YE + E+N + ++K +L ED+
Sbjct: 581 LTAESALTSMREKYESEKKMMMEINDKMRRELK--QLKEDA 619
>U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid
phosphatase protein1 protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 350 KPDQPARLYCLTYLKLRSAHSLISVL 273
KPDQP +CLT L S+ + +S+L
Sbjct: 408 KPDQPIDQWCLTDLNKSSSFATVSML 433
>U42832-1|AAV28357.1| 442|Caenorhabditis elegans Hypothetical
protein F01E11.3 protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 146 LAEKLENEARNIRDIADKAFNTSLVANKIA 235
L +++NE NIR +AFN ++ NK A
Sbjct: 201 LERRIKNERENIRKAIQEAFNKAVEENKTA 230
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 119 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGIT-KQANISNEVQILTNE 295
S L+K ++ L+ + + I +I++K + +L ++ A + K+ +V +T E
Sbjct: 107 SNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEITKE 166
Query: 296 LNAASGKLSSINELA 340
LNA GK+ L+
Sbjct: 167 LNARIGKVKRTESLS 181
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.1 bits (57), Expect = 8.7
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Frame = +2
Query: 77 RNRSDQFGKQSVDMSALAKESRLLAEKLENEARNI--RDIADKAFNTSLVANKIAKDGIT 250
+N+ + KQS ++ +ESR+L ++ E E NI +I K S + +I D
Sbjct: 79 KNQEELLKKQSEEIERCKEESRMLIQQKE-EMENIHSEEIFGKNKTISNLRKQIDGDVER 137
Query: 251 KQANISN-EVQILTNELNA------ASGKLSSINEL-ADQALKRAKVVYEEALGLYAEVN 406
K+A I ++ + ++N A I +L +D +R K V ++ + + N
Sbjct: 138 KKAKIRTLRKELCSADMNTGKMCRRAKRAEDRIAKLESDLEEERQKHVGQDISHILDQHN 197
Query: 407 TTLLP-DIKLRKLHEDSLGMNRTIDD 481
+T++ +++L ++ +N +++D
Sbjct: 198 STVMALEMQLANTQQEKATLNTSVED 223
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.1 bits (57), Expect = 8.7
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Frame = +2
Query: 77 RNRSDQFGKQSVDMSALAKESRLLAEKLENEARNI--RDIADKAFNTSLVANKIAKDGIT 250
+N+ + KQS ++ +ESR+L ++ E E NI +I K S + +I D
Sbjct: 79 KNQEELLKKQSEEIERCKEESRMLIQQKE-EMENIHSEEIFGKNKTISNLRKQIDGDVER 137
Query: 251 KQANISN-EVQILTNELNA------ASGKLSSINEL-ADQALKRAKVVYEEALGLYAEVN 406
K+A I ++ + ++N A I +L +D +R K V ++ + + N
Sbjct: 138 KKAKIRTLRKELCSADMNTGKMCRRAKRAEDRIAKLESDLEEERQKHVGQDISHILDQHN 197
Query: 407 TTLLP-DIKLRKLHEDSLGMNRTIDD 481
+T++ +++L ++ +N +++D
Sbjct: 198 STVMALEMQLANTQQEKATLNTSVED 223
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
L NEL++ SG++ +N+L + K + + + L L +V KL E
Sbjct: 849 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNE 908
Query: 464 NRTIDDKAA 490
N+ + K A
Sbjct: 909 NKELVGKEA 917
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
L NEL++ SG++ +N+L + K + + + L L +V KL E
Sbjct: 922 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNE 981
Query: 464 NRTIDDKAA 490
N+ + K A
Sbjct: 982 NKELVGKEA 990
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 284 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGM 463
L NEL++ SG++ +N+L + K + + + L L +V KL E
Sbjct: 922 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNE 981
Query: 464 NRTIDDKAA 490
N+ + K A
Sbjct: 982 NKELVGKEA 990
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 27.1 bits (57), Expect = 8.7
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Frame = +2
Query: 71 KARNRS----DQFGKQSVDMSALAKESRLLAEKLENEARNIR-DIADKAFN--TSLVA-N 226
KARN ++ G + + + L +K E E +R D+ D A N TS+ A
Sbjct: 1144 KARNEMQMELEELGDRLDEAGGATQAQIELNKKREAELAKLRQDLEDAAINSETSMAALR 1203
Query: 227 KIAKDGITKQANISNEVQILTNEL----NAASGKLSSINELADQALKRAKVVYEEALGLY 394
K D + + ++ + +Q + +L N ++ + + AD K+ + A L
Sbjct: 1204 KKHNDAVAELSDQLDTIQKMRGKLEREKNDKQREVDELQQSADVEAKQRQNCERMAKQLE 1263
Query: 395 AEV-NTTLLPDIKLR----------KLHEDSLGMNRTIDDKAADLDRLIA*K-RRHSE 532
A++ + TL D + R K+H ++ +NR ++D A L L K ++HS+
Sbjct: 1264 AQLTDMTLKSDEQARLIQELTMGKNKVHNENQDLNRQLEDAEAQLCALNRIKQQQHSQ 1321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,018,464
Number of Sequences: 27780
Number of extensions: 171242
Number of successful extensions: 541
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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