Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H08
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 299 5e-81
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 299 5e-81
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 299 5e-81
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 299 5e-81
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 299 5e-81
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 299 5e-81
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 299 5e-81
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 297 2e-80
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 296 5e-80
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 296 5e-80
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 296 5e-80
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 296 5e-80
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 296 5e-80
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 294 2e-79
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 286 4e-77
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 262 7e-70
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 259 5e-69
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 6e-25
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 1.9
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 1.9
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 1.9
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 1.9
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.9
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.9
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 1.9
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 4.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.4
U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosyl... 30 5.8
AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA glycos... 30 5.8
AB209146-1|BAD92383.1| 293|Homo sapiens transcription factor AP... 30 5.8
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.7
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 299 bits (734), Expect = 5e-81
Identities = 140/202 (69%), Positives = 159/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 297 bits (729), Expect = 2e-80
Identities = 139/202 (68%), Positives = 158/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 296 bits (726), Expect = 5e-80
Identities = 138/202 (68%), Positives = 158/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KII +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 296 bits (726), Expect = 5e-80
Identities = 138/202 (68%), Positives = 158/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KII +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 296 bits (726), Expect = 5e-80
Identities = 138/202 (68%), Positives = 158/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KII +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 296 bits (726), Expect = 5e-80
Identities = 138/202 (68%), Positives = 158/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KII +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 296 bits (726), Expect = 5e-80
Identities = 138/202 (68%), Positives = 158/202 (78%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KII +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 294 bits (721), Expect = 2e-79
Identities = 137/201 (68%), Positives = 157/201 (78%)
Frame = +3
Query: 24 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 203
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 204 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 383
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 384 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQPL 563
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KII +
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 564 HDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 MVIGGANLGRVGVITNRERHP 201
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 286 bits (702), Expect = 4e-77
Identities = 133/202 (65%), Positives = 155/202 (76%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI +
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
G I +RERHP
Sbjct: 181 CMVIAGANLGRVGVITNRERHP 202
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 262 bits (642), Expect = 7e-70
Identities = 123/182 (67%), Positives = 141/182 (77%)
Frame = +3
Query: 81 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 260
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 261 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLV 440
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 441 THDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQPLHDHRRQESGSRRHIVSRER 620
THD RT+RYPDPLIKVND++Q+D+ T KI + G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 621 HP 626
HP
Sbjct: 181 HP 182
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 259 bits (635), Expect = 5e-69
Identities = 124/184 (67%), Positives = 142/184 (77%)
Frame = +3
Query: 75 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 254
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 255 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPY 434
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 435 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQPLHDHRRQESGSRRHIVSR 614
LVTHD RT+RYPDPLIKVND++Q+D+ T KI + G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 615 ERHP 626
ERHP
Sbjct: 180 ERHP 183
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 6e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 188
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 395 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 523
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 395 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 523
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 395 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 523
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 395 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 523
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 407
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 407 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 508
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 395 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 523
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 4.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 371 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 487
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 102 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 269
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 270 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 362
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 261 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 407
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 102 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 269
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 270 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 362
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosylase
protein.
Length = 351
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 148 GKHSRSLWGPVEGRGAYTPPSL 83
G RSLWGP G TPPSL
Sbjct: 300 GNFFRSLWGPYAGWAQATPPSL 321
>AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA
glycosylase protein.
Length = 341
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 148 GKHSRSLWGPVEGRGAYTPPSL 83
G RSLWGP G TPPSL
Sbjct: 290 GNFFRSLWGPYAGWAQATPPSL 311
>AB209146-1|BAD92383.1| 293|Homo sapiens transcription factor AP-4
(activating enhancer binding protein 4) variant protein.
Length = 293
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 369 EEAKYKLCKVRRVATGPKSVPYLVTHDGRTLR---YPDPLIKVNDSVQLDISTNKIIGLH 539
E+ + ++ ++R+ +SV ++ R+L YP+ L + VQL ++ LH
Sbjct: 203 EDLRREMIELRQQLDKERSVRMMLEEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLH 262
Query: 540 QVRLRQPLHDHRRQESGSRRHIVSRER 620
Q +L + R Q S R + S +R
Sbjct: 263 QEKLEREQQQLRTQVSRRRPGVGSGDR 289
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 252 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 416
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,139,034
Number of Sequences: 237096
Number of extensions: 2110269
Number of successful extensions: 14730
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 14484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14712
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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