Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H08
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 301 5e-82
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 301 5e-82
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 301 5e-82
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 295 2e-80
AE014298-234|AAF45650.2| 628|Drosophila melanogaster CG11491-PD... 29 3.9
AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p pro... 29 5.1
AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-P... 29 5.1
AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC... 28 9.0
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 9.0
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 301 bits (739), Expect = 5e-82
Identities = 142/202 (70%), Positives = 162/202 (80%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI +
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
+ G +V+RERHP
Sbjct: 181 CMITGGRNLGRVGTVVNRERHP 202
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 301 bits (739), Expect = 5e-82
Identities = 142/202 (70%), Positives = 162/202 (80%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI +
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
+ G +V+RERHP
Sbjct: 181 CMITGGRNLGRVGTVVNRERHP 202
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 301 bits (739), Expect = 5e-82
Identities = 142/202 (70%), Positives = 162/202 (80%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI +
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
+ G +V+RERHP
Sbjct: 181 CMITGGRNLGRVGTVVNRERHP 202
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 295 bits (725), Expect = 2e-80
Identities = 140/202 (69%), Positives = 160/202 (79%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQP 560
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI +
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 561 LHDHRRQESGSRRHIVSRERHP 626
+ G +V+RERHP
Sbjct: 181 CMITGGRNLGRVGTVVNRERHP 202
>AE014298-234|AAF45650.2| 628|Drosophila melanogaster CG11491-PD,
isoform D protein.
Length = 628
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 408 ATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIIGLHQVRLRQPLHDHRRQES 587
A P S+P + H + YP + +ND QL I +I+ L+ L Q + H S
Sbjct: 550 AQTPTSIP-MADHQDLAI-YPKRPMPLNDQYQLLIQQRQIMTLYDYYLYQ-RNSHSHSHS 606
Query: 588 GSRRH 602
SR H
Sbjct: 607 HSRNH 611
>AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p
protein.
Length = 707
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 395 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 216
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 328 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 387
Query: 215 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 90
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 388 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 429
>AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-PB,
isoform B protein.
Length = 714
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 395 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 216
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 335 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 394
Query: 215 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 90
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 395 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 436
>AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC,
isoform C protein.
Length = 945
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 392 QGAARRDRPQERAVPGDARRAHAPVPGPAH 481
+G+ RR Q+R PG P P PAH
Sbjct: 581 RGSPRRKDAQDRTTPGTEPHTTNPNPAPAH 610
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 9.0
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 66 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 236
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 237 -DGKVRTDPTYP 269
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,942,741
Number of Sequences: 53049
Number of extensions: 624652
Number of successful extensions: 1939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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