Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H07
(298 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 27 2.4
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z49969-2|CAA90270.1| 564|Caenorhabditis elegans Hypothetical pr... 26 5.6
U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical pr... 26 5.6
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 26 5.6
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 26 5.6
AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi... 26 5.6
AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna ... 26 5.6
Z36282-1|CAD45602.1| 424|Caenorhabditis elegans Hypothetical pr... 25 9.7
U40952-7|AAA81741.1| 52|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF455271-1|AAL65193.1| 424|Caenorhabditis elegans C21ORF80 prot... 25 9.7
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -3
Query: 296 GKTNQSIFQFKKNMDKTKIMSNVHVARVRWMRMAQDRSSW 177
GK+++ IF+ +K + K+ N+ V +VRW+ D +W
Sbjct: 18 GKSDE-IFEVEKILAH-KVTDNLLVLQVRWLGYGADEDTW 55
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 67 AEKTFVVNIKTKIDPSIH--SSTQPKG 141
+ +TF V + IDP+IH SS PKG
Sbjct: 34 SSRTFSVKVNNHIDPNIHPISSGVPKG 60
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical protein
F54F11.2 protein.
Length = 1589
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 35 GNFKINVKFYTRRRHL*LTLKQKLIHPSIHPLNRKASTSERKSPPKIATTTGLAPSAS 208
GNF +V FYT R + + QKL P+ + +++ A T A S S
Sbjct: 896 GNFNQSVSFYTARAQNLVYMAQKLEDPTYQTTINSSPALKKEKQLYNACLTATASSQS 953
>Z49969-2|CAA90270.1| 564|Caenorhabditis elegans Hypothetical
protein W01C9.2 protein.
Length = 564
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 123 IHSTERRPLLNVSLPQRSPRRPVLRHPHPSDSRDMDI 233
+ +T R+PLL ++ Q PV P P D D+
Sbjct: 213 VGTTSRKPLLFTTVIQEVKNAPVTARPDPFAHLDYDL 249
>U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical
protein C23H3.3 protein.
Length = 378
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 160 VSPKDRHDDRSCAIRIHRTL 219
VS K+ HD+ S A+++H TL
Sbjct: 305 VSSKNEHDNGSDAVKLHMTL 324
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 175 DLWGRLTFRSGRLSVEWMNGWMDQFLF 95
DLW L+ SG+ E M+GW Q F
Sbjct: 438 DLWTALSEASGQNVNELMSGWTQQMGF 464
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 175 DLWGRLTFRSGRLSVEWMNGWMDQFLF 95
DLW L+ SG+ E M+GW Q F
Sbjct: 502 DLWTALSEASGQNVNELMSGWTQQMGF 528
>AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi
enabling proteinSID-1 protein.
Length = 776
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 201 PHPSDSRDMDIRHD 242
P PS+ RDMD+ HD
Sbjct: 358 PVPSEQRDMDLSHD 371
>AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna
interference defectiveprotein 1 protein.
Length = 776
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 201 PHPSDSRDMDIRHD 242
P PS+ RDMD+ HD
Sbjct: 358 PVPSEQRDMDLSHD 371
>Z36282-1|CAD45602.1| 424|Caenorhabditis elegans Hypothetical
protein K10G9.3 protein.
Length = 424
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 209 WMRMAQDRSSWRSLGETYVQKWTPFG*VDEW 117
+MR+A S R GE Y+ P+G + W
Sbjct: 61 YMRVANTVRSLRDSGENYILVLPPWGRLHHW 91
>U40952-7|AAA81741.1| 52|Caenorhabditis elegans Hypothetical
protein C03B1.10 protein.
Length = 52
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 148 SGRLSVEWMNGWMDQFL 98
SGRL WM+GWMD ++
Sbjct: 15 SGRLG--WMDGWMDGWM 29
>AF455271-1|AAL65193.1| 424|Caenorhabditis elegans C21ORF80
protein.
Length = 424
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 209 WMRMAQDRSSWRSLGETYVQKWTPFG*VDEW 117
+MR+A S R GE Y+ P+G + W
Sbjct: 61 YMRVANTVRSLRDSGENYILVLPPWGRLHHW 91
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 150 LNVSLPQRSPRRPVLRHPHPSDSRDMD 230
+++ P SPRR L PS+SR++D
Sbjct: 575 IDLVTPPASPRRSDLYMQFPSNSRELD 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,351,166
Number of Sequences: 27780
Number of extensions: 145138
Number of successful extensions: 424
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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