Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H07
         (298 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    25   0.26 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   0.80 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   0.80 
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   1.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   4.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   5.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   5.6  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   7.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   7.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.4  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          19   9.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    19   9.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    19   9.8  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    19   9.8  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 24.6 bits (51), Expect = 0.26
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 213 DSRDMDIRHDFGLIHVL 263
           +SR+MDI HD GL  VL
Sbjct: 46  NSRNMDIEHDPGLAAVL 62


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 32  NGNFKINVKFYTRRRHL*LTLKQKLIH 112
           +GN K+N    T R HL LT +  L H
Sbjct: 243 SGNCKLNDILLTVRPHLELTFENILSH 269


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 32  NGNFKINVKFYTRRRHL*LTLKQKLIH 112
           +GN K+N    T R HL LT +  L H
Sbjct: 243 SGNCKLNDILLTVRPHLELTFENILSH 269


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 236 SNVHVARVRWMRMAQDRSSWRSLGETYVQKWTPFG 132
           S +H++   + R+A +    RS+G   +Q + P G
Sbjct: 198 STIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSG 232


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 158 YVQKWTPFG 132
           YV  WTP+G
Sbjct: 283 YVLSWTPYG 291


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 HDFGLIHVLFKLKN*LI 287
           H  GL+H   KLKN L+
Sbjct: 714 HSQGLVHRDVKLKNVLL 730


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 HDFGLIHVLFKLKN*LI 287
           H  GL+H   KLKN L+
Sbjct: 752 HSQGLVHRDVKLKNVLL 768


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 125 DEWMDGSIFVLMLTTNVFSACKISR 51
           D++ DG+I V      +FS C I +
Sbjct: 45  DDFRDGNIDVEDEKVQLFSECLIKK 69


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 160 VSPKDRHDDRS 192
           +SP D HDDR+
Sbjct: 380 LSPVDIHDDRT 390


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 295 EKPISQFFNLKRTWIRPKS 239
           EKPI   +N+    + PKS
Sbjct: 803 EKPIGILWNMNNKRLDPKS 821


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 265 KRTWIRPKSCLMSMSR 218
           KR+W RP+    + S+
Sbjct: 44  KRSWSRPRESAQTTSK 59


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 133 VEWMNGWMDQ 104
           V W++ W+DQ
Sbjct: 258 VSWVSFWLDQ 267


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 133 VEWMNGWMDQ 104
           V W++ W+DQ
Sbjct: 258 VSWVSFWLDQ 267


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 280 QFFNLKRTWIRPK 242
           ++  LKR W +PK
Sbjct: 26  RYSKLKRNWRKPK 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,363
Number of Sequences: 438
Number of extensions: 1864
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)