Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H05
         (474 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   4.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   5.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   9.5  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    22   9.5  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 144 INVFYFYLLINVTLMWIQFSM 206
           IN FYFY       +W+ F++
Sbjct: 219 INSFYFYETEQFAFLWVLFTV 239


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +2

Query: 107 LVIIYNTTYLLIYKCFLFL---STNKCYIDVDTIFYVFYTARVILLLL 241
           L I  N   L +Y  F      STN     ++ IF V +TA  I+ L+
Sbjct: 121 LTIFANCVALAVYTPFPNSDSNSTNAALEKIEYIFLVIFTAECIMKLI 168


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 316 HYGSKATLAIHYSHKHVYY 372
           HY   A  A+H+ H H ++
Sbjct: 147 HYQPAAAAAMHHHHHHPHH 165


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 168 VDRNRKHL*MSRYVVLYIITRYRP 97
           +D N  +L  SR ++ Y+I  YRP
Sbjct: 58  LDDNGFYLGESRAILSYLIDAYRP 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,924
Number of Sequences: 2352
Number of extensions: 4923
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)