Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H04
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      23   5.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.9  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.1  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.1  

>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 166 ISNIDFSTLTSSVAPIIMSIRD 231
           I ++DF T+T+   P + +I+D
Sbjct: 107 IRSVDFETVTTFEPPYVQAIKD 128


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +3

Query: 126 EILSRCLRYFVPGYLE-YRFFDSHELRSSYYYEYKR---QRLSKFSNRCEQK 269
           + L R L    P Y+E +R   S +L + +Y  Y      R+++F+NR   K
Sbjct: 352 DFLPRFLFMKRPPYIENHRKLLSKDLHACFYPYYSTTTLNRIARFTNRAPSK 403


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +3

Query: 126 EILSRCLRYFVPGYLE-YRFFDSHELRSSYYYEYKR---QRLSKFSNRCEQK 269
           + L R L    P Y+E +R   S +L + +Y  Y      R+++F+NR   K
Sbjct: 352 DFLPRFLFMKRPPYIENHRKLLSKDLHACFYPYYSTTTLNRIARFTNRAPSK 403


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 256 DANKNTDNDENDQMEKP-RSQVKKYRYYGP-IETLIVKLLMNHKLLSLIDDRTGKLAF 423
           +ANKN  ND++ Q  K  +S    +    P +E  + + L    L+  ++   G L F
Sbjct: 374 EANKNDGNDQSVQSSKEIKSVFALHSQTAPLVEASLGEQLDTSLLIEPVNPMNGNLEF 431


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 256 DANKNTDNDENDQMEKP-RSQVKKYRYYGP-IETLIVKLLMNHKLLSLIDDRTGKLAF 423
           +ANKN  ND++ Q  K  +S    +    P +E  + + L    L+  ++   G L F
Sbjct: 375 EANKNDGNDQSVQSSKEIKSVFALHSQTAPLVEASLGEQLDTSLLIEPVNPMNGNLEF 432


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 560 SFIENGIYLSDWR 522
           + I+ G+YL DWR
Sbjct: 36  AIIDTGMYLRDWR 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,302
Number of Sequences: 2352
Number of extensions: 9163
Number of successful extensions: 64
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)