Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H04
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 30 1.0
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 30 1.0
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 30 1.0
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 30 1.0
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 29 2.3
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 29 2.3
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 29 3.1
AF016675-5|AAB66134.1| 476|Caenorhabditis elegans Hypothetical ... 28 4.0
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 28 5.3
U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g ... 28 5.3
AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical ... 28 5.3
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z46381-1|CAA86513.1| 437|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF082012-1|AAD03024.1| 437|Caenorhabditis elegans UDP-N-acetylg... 27 9.3
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 292 QMEKPRSQVKKYRYYGPIETLIVKLLMNHKLLSLIDDRTGK----LAFFCIACEYYTLRF 459
+ E S Y G I T++ L++ KL +++ D+ L F C Y+ +F
Sbjct: 274 RQEAVASMATTYLTTGFIATILYVLIIFTKLSTIVRDKIFNSLVLLLFVCHLLTTYSWQF 333
Query: 460 HYDSVLSHVFSD 495
+ DSVL FS+
Sbjct: 334 YSDSVLDEEFSN 345
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 292 QMEKPRSQVKKYRYYGPIETLIVKLLMNHKLLSLIDDRTGK----LAFFCIACEYYTLRF 459
+ E S Y G I T++ L++ KL +++ D+ L F C Y+ +F
Sbjct: 274 RQEAVASMATTYLTTGFIATILYVLIIFTKLSTIVRDKIFNSLVLLLFVCHLLTTYSWQF 333
Query: 460 HYDSVLSHVFSD 495
+ DSVL FS+
Sbjct: 334 YSDSVLDEEFSN 345
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 195 ELRSSYYYEYKRQ-RLSKFSNRCEQKYGQR*KRSDGETEKSSQEIPVLRPNRDSDREVAD 371
ELR S Y + + LSKF ++CEQ K+S ++ ++ V + +D+D A+
Sbjct: 513 ELRMSKEYNSEMESELSKFRDKCEQLKEDLRKKSGELAQEKNETQRVFQQKKDADEAFAE 572
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 195 ELRSSYYYEYKRQ-RLSKFSNRCEQKYGQR*KRSDGETEKSSQEIPVLRPNRDSDREVAD 371
ELR S Y + + LSKF ++CEQ K+S ++ ++ V + +D+D A+
Sbjct: 513 ELRMSKEYNSEMESELSKFRDKCEQLKEDLRKKSGELAQEKNETQRVFQQKKDADEAFAE 572
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 388 TTIYDSSATSRSESLLGRSTGIS*LDFSVSPSDR 287
TT S ATS + +++GRS G S + SP+DR
Sbjct: 73 TTAAASVATSSASAVIGRSNGRSSSTVAASPADR 106
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 388 TTIYDSSATSRSESLLGRSTGIS*LDFSVSPSDR 287
TT S ATS + +++GRS G S + SP+DR
Sbjct: 104 TTAAASVATSSASAVIGRSNGRSSSTVAASPADR 137
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 388 TTIYDSSATSRSESLLGRSTGIS*LDFSVSPSDR 287
TT S ATS + +++GRS G S + SP+DR
Sbjct: 168 TTAAASVATSSASAVIGRSNGRSSSTVAASPADR 201
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 388 TTIYDSSATSRSESLLGRSTGIS*LDFSVSPSDR 287
TT S ATS + +++GRS G S + SP+DR
Sbjct: 168 TTAAASVATSSASAVIGRSNGRSSSTVAASPADR 201
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 187 TLTSSVAPIIMSIRDNVYQNFPTDANKNTDNDE-NDQMEKPRSQVKKYRYYGPIETLIVK 363
T +AP ++ + DN Y + P++AN+N N+E ++KP K Y E +
Sbjct: 1007 TSLKDIAPELVKMFDN-YNSNPSEANENAMNEELLADLQKPAVNSKLKELYKSDEKIRKI 1065
Query: 364 LLMNHKL 384
L H L
Sbjct: 1066 LDSQHPL 1072
>AF016675-5|AAB66134.1| 476|Caenorhabditis elegans Hypothetical
protein T27B7.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 177 DIRDILAQNIVNILIEFHTCCNTS 106
D++ LAQ+I NI I+ H C NT+
Sbjct: 236 DLQMKLAQSIWNIFIKIHKCSNTA 259
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 225 YTHNNRSYGARESRKIDIRDILAQNIVNIL 136
Y N+ SYG RES+ +D + L I N+L
Sbjct: 561 YDVNSHSYGLRESKNVDFNE-LELEITNLL 589
>U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g
protein signalingprotein 5 protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 153 FVPGYLEYRFFDSHELRSSYYYEYKRQRLSKFSNRC 260
FV EYR+FD E ++S Y YK+ L S+ C
Sbjct: 182 FVKSLFEYRYFD--EFQNSVY--YKKHELEVLSDGC 213
>AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical
protein Y65B4BL.5 protein.
Length = 719
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 112 VAAGVKFYQDVYDILCQDISNIDFSTLTSSVAPIIMSIRDNVYQNFPTDANKNT 273
V A V FY+ +L +DI L +V P++ + + +Y ++ NK+T
Sbjct: 358 VGAKVGFYRGDIRVLAEDIKE-----LKPTVVPVVPRVLNRLYDKVMSEVNKST 406
>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
protein F27D4.6 protein.
Length = 1008
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = +1
Query: 289 DQMEKPRSQVKKYRYYGPIETLIVKLLMNHKLLSLIDDRTGKLAFFCIACEYYTLRF-HY 465
DQ+ + VK + I L+ + + R FC+ +R +
Sbjct: 562 DQLVSGIAVVKGKEFNDKINELLTLIKSKSSEEKAKNTRVNWKCTFCVNLHSNQIRMGNM 621
Query: 466 DSVLSHVFSDTHIHNLSCILQS 531
S + H+FS H N+ C+ S
Sbjct: 622 SSAIRHIFSFDHRQNMGCVASS 643
>Z46381-1|CAA86513.1| 437|Caenorhabditis elegans Hypothetical
protein M01F1.1 protein.
Length = 437
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 442 YYTLRFHYDSVLSHVFSDTHIHNLSCILQSD 534
YY + HY L+H+FS+++ ++ I + D
Sbjct: 168 YYYISRHYKLALNHIFSNSNNYSSVIITEDD 198
>AF082012-1|AAD03024.1| 437|Caenorhabditis elegans
UDP-N-acetylglucosamine:a-3-D-mannosideb-1,
2-N-acetylglucosaminyltransferase I protein.
Length = 437
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 442 YYTLRFHYDSVLSHVFSDTHIHNLSCILQSD 534
YY + HY L+H+FS+++ ++ I + D
Sbjct: 168 YYYISRHYKLALNHIFSNSNNYSSVIITEDD 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,396,875
Number of Sequences: 27780
Number of extensions: 226336
Number of successful extensions: 764
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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