Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H03
(483 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343... 98 3e-21
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443... 96 1e-20
01_01_1199 - 9657169-9657254,9657369-9657395,9657485-9657553,965... 95 3e-20
10_01_0169 - 1899491-1899666,1901358-1901638,1902468-1902477,190... 31 0.64
01_01_0981 + 7766025-7766753 31 0.64
07_01_1161 - 10991245-10991283,10991389-10991427,10991513-109917... 29 1.5
03_03_0235 - 15688002-15688040,15688146-15688184,15688270-156885... 29 1.5
08_01_0467 - 4111657-4111750,4111829-4112034 29 2.6
03_06_0262 + 32730927-32731634,32731713-32732159,32732247-327331... 28 3.4
03_05_0551 - 25471909-25471947,25472053-25472091,25472177-254724... 28 3.4
11_05_0074 + 18850567-18851095,18851249-18851274,18851353-188516... 28 4.5
10_03_0036 - 7286425-7286463,7286686-7286974,7287306-7288192,728... 28 4.5
09_01_0133 - 1998528-1998566,1998672-1998710,1998796-1998946,199... 28 4.5
07_03_0677 + 20620873-20621401,20621555-20621580,20621659-206221... 28 4.5
06_03_0192 + 17755807-17755941,17756023-17756235,17758003-177580... 28 4.5
06_02_0129 + 12151133-12151840,12151919-12152365,12152453-121533... 28 4.5
05_07_0317 - 29193940-29193978,29194208-29194496,29194579-291947... 28 4.5
03_04_0081 + 17130557-17130964,17130971-17131085,17131239-171312... 28 4.5
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 28 4.5
02_01_0539 + 3941189-3941896,3942110-3942394,3942508-3943394,394... 28 4.5
12_02_1001 - 25162761-25162977,25163060-25163230,25163309-251638... 27 6.0
12_02_0095 + 13559997-13560232,13561295-13561683,13562092-135623... 27 6.0
11_03_0217 - 11828305-11828343,11828449-11828487,11828573-118288... 27 6.0
10_07_0007 - 11768692-11768730,11768960-11769248,11769331-117695... 27 6.0
10_01_0331 + 3620080-3620285,3620364-3620534,3620617-3620752 27 6.0
08_01_1037 - 10536547-10536585,10536814-10537102,10537202-105373... 27 6.0
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 27 6.0
06_01_1027 + 8011609-8011814,8011893-8012063,8012145-8012286 27 7.9
>05_05_0300 +
23932947-23933196,23934022-23934123,23934249-23934317,
23934406-23934446
Length = 153
Score = 98.3 bits (234), Expect = 3e-21
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -1
Query: 192 RKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 31
RKSEIEYYA+L K VHH+ GNN++LGTACGKYYRVC L+I DPGDSDII T P
Sbjct: 97 RKSEIEYYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTP 150
>01_06_1103 -
34543915-34543955,34544069-34544137,34544294-34544395,
34545603-34545708,34545998-34546079,34546850-34547142
Length = 230
Score = 96.3 bits (229), Expect = 1e-20
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = -1
Query: 192 RKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 25
RKSEIEYYA+L K V+H++GNN++LGTACGKYYRVC L++ DPGDSDI LPE+
Sbjct: 174 RKSEIEYYAMLGKVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPGDSDITKQLPES 229
>01_01_1199 -
9657169-9657254,9657369-9657395,9657485-9657553,
9657922-9658023,9659895-9660000,9660145-9660165
Length = 136
Score = 94.7 bits (225), Expect = 3e-20
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = -1
Query: 192 RKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITT 37
RKSEIEYYA+LAK VHH+ GNN++LGTACGKY+RVC L+I DPGDSDII T
Sbjct: 56 RKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107
>10_01_0169 -
1899491-1899666,1901358-1901638,1902468-1902477,
1902696-1902786,1903993-1904031,1904117-1904405,
1904488-1904658,1904737-1905623,1905711-1906157,
1906236-1906460,1906536-1906943
Length = 1007
Score = 30.7 bits (66), Expect = 0.64
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMMFLI 296
C HL+++ + N P+ + H P + PT +I + N LF LY + ++
Sbjct: 592 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLDPTNYIVVDFNDLFDLYRLRVV 646
>01_01_0981 + 7766025-7766753
Length = 242
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 123 YCFHCSGGHLFWLGEHNILSPTSCQRLANGHKT 221
+C HC H W G H+I+ P + A G T
Sbjct: 40 FCSHCCSSHHLWPGHHHIVVPVTVD-AATGRPT 71
>07_01_1161 -
10991245-10991283,10991389-10991427,10991513-10991738,
10991902-10992054,10992133-10992638,10992651-10993019,
10993107-10993553,10993752-10994339
Length = 788
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P +SPT +I + LF LY +
Sbjct: 573 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLSPTNYIVVDFKDLFDLYRL 624
>03_03_0235 -
15688002-15688040,15688146-15688184,15688270-15688558,
15688641-15688811,15688907-15689400,15690377-15690819,
15690921-15690933
Length = 495
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N PT + H P + PT +I + LF LY +
Sbjct: 259 CKDLHLYYMEKSNARKPTKATDILEEHDGKPFLGPTNYIVVDFKDLFDLYRL 310
>08_01_0467 - 4111657-4111750,4111829-4112034
Length = 99
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMMFLI 296
C HL+++ + N P+ + H P + PT +I + LF LY + ++
Sbjct: 5 CKDLHLYYMEKSNARKPSKATDILGEHDRKPFLGPTNYIVVDFKDLFNLYRLRVV 59
>03_06_0262 +
32730927-32731634,32731713-32732159,32732247-32733133,
32733212-32733382,32733465-32733753,32733839-32733877,
32733983-32734021
Length = 859
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 617 CKDFHLYYMEKSNARKPSKATDILRQHDGKPFLGPTNYIVVDFKDLFDLYRL 668
>03_05_0551 -
25471909-25471947,25472053-25472091,25472177-25472402,
25472566-25472718,25472797-25473035
Length = 231
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 16 CKDLHLYYMEKSNARKPSKATDILGQHNGKPFLGPTNYIVVDFKDLFDLYRL 67
>11_05_0074 +
18850567-18851095,18851249-18851274,18851353-18851645,
18851898-18852699,18852874-18853022,18853105-18853393,
18853479-18853517,18853623-18853661
Length = 721
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFIIQ 257
C HL+++ + N P+ + H P + PT +I++
Sbjct: 511 CKDLHLYYMEKSNARKPSKATNILGQHDGKPFLGPTNYIVK 551
>10_03_0036 -
7286425-7286463,7286686-7286974,7287306-7288192,
7288280-7288726,7288805-7288830,7288984-7289512
Length = 738
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 566 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYRL 617
>09_01_0133 -
1998528-1998566,1998672-1998710,1998796-1998946,
1999185-1999337,1999416-2000302,2000390-2000836,
2000915-2001190,2001215-2001622
Length = 799
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 609 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYKL 660
>07_03_0677 +
20620873-20621401,20621555-20621580,20621659-20622105,
20622193-20623079,20623158-20623328,20623411-20623603,
20623785-20623823,20623929-20623967
Length = 776
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 566 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYRL 617
>06_03_0192 +
17755807-17755941,17756023-17756235,17758003-17758086,
17759280-17759948
Length = 366
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 229 YGVVLCPFANLWQEVGDRILCSPSQNRCPPLQW 131
Y VV+ A +W+E+ R PS R PL W
Sbjct: 275 YAVVVTVCAPIWEEIVFRGFLLPSLTRYMPLPW 307
>06_02_0129 +
12151133-12151840,12151919-12152365,12152453-12153339,
12153418-12153588,12153671-12153935,12155208-12155247,
12155846-12155929,12156058-12156167
Length = 903
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 617 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYRL 668
>05_07_0317 -
29193940-29193978,29194208-29194496,29194579-29194749,
29194829-29195715,29195803-29196249,29196328-29197056
Length = 853
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 624 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYRL 675
>03_04_0081 +
17130557-17130964,17130971-17131085,17131239-17131264,
17131508-17131789,17131877-17132600,17132608-17132830,
17132909-17133079,17133162-17133450,17133536-17133574,
17133680-17133718
Length = 771
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 529 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYRL 580
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P + H P + PT +I + LF LY +
Sbjct: 486 CKDFHLYYMEKSNARKPNKATDILGEHDGKPFLGPTNYIVVDFKDLFDLYRL 537
>02_01_0539 +
3941189-3941896,3942110-3942394,3942508-3943394,
3943473-3943643,3943726-3943744,3943763-3944014,
3944100-3944138,3944244-3944282
Length = 799
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 563 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYIVVDFKDLFDLYRL 614
>12_02_1001 -
25162761-25162977,25163060-25163230,25163309-25163814,
25163827-25164195,25164283-25164729,25164808-25164833,
25164987-25165515
Length = 754
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMF-IIQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT + ++ LF LY +
Sbjct: 562 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYVVVDFKDLFDLYRL 613
>12_02_0095 +
13559997-13560232,13561295-13561683,13562092-13562387,
13562475-13563361,13563440-13563562,13563693-13563981,
13564211-13564249
Length = 752
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMF-IIQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT + ++ LF LY +
Sbjct: 539 CKDLHLYYMEKSNARKPSKATDILGEHDGKPFLGPTNYVVVDFKDLFDLYRL 590
>11_03_0217 -
11828305-11828343,11828449-11828487,11828573-11828861,
11828944-11829114,11829193-11830079,11830167-11830346,
11830692-11831399
Length = 770
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMF-IIQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT + ++ LF LY +
Sbjct: 528 CKDLHLYYMEKSNARKPSKATDILGQHDGKPFLGPTNYVVVDFKDLFDLYRL 579
>10_07_0007 -
11768692-11768730,11768960-11769248,11769331-11769501,
11769580-11769785
Length = 234
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P+ + H P + PT +I + LF LY +
Sbjct: 5 CKDLHLYYMEKSNARKPSKVTDILGEHDGKPFLGPTNYIVVDFKDLFDLYRL 56
>10_01_0331 + 3620080-3620285,3620364-3620534,3620617-3620752
Length = 170
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P + H P + PT +I + LF LY +
Sbjct: 5 CKDLHLYYMEKSNARKPNKATDILGEHDGKPFLGPTNYIVVDFKDLFDLYRL 56
>08_01_1037 -
10536547-10536585,10536814-10537102,10537202-10537327,
10537336-10538291,10538379-10538825,10538904-10539632
Length = 861
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P + H P + PT +I + LF LY +
Sbjct: 624 CKDLHLYYMEKSNARKPNKATDILGEHDGKPFLGPTNYIMVNFKDLFDLYRL 675
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C HL+++ + N P + H P + PT +I + LF LY +
Sbjct: 521 CKDLHLYYMEKSNARKPNKATDILGEHDGKPFLGPTNYIVVDFKNLFDLYRL 572
>06_01_1027 + 8011609-8011814,8011893-8012063,8012145-8012286
Length = 172
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 CSGGHLFWLGEHNILSPTSCQRLANGHKTTP*VSPTMFI-IQ*N*LFQLYMM 287
C H++++ + N P + H P + PT +I + LF LY +
Sbjct: 5 CRDLHIYYMEKSNARRPNKATEILGEHDRKPFLGPTNYIVVDFKDLFDLYRL 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,637,045
Number of Sequences: 37544
Number of extensions: 244510
Number of successful extensions: 532
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -