Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H03
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.9  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.1  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 144 GHLFWLGEHNILSPTSCQRLAN 209
           G LF+     I++  +C+RL N
Sbjct: 231 GELFYYMHQQIMARYNCERLCN 252


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 226 HRFPRQCL*SSKISFSNYT 282
           HR PR CL  + ++ ++ T
Sbjct: 526 HRMPRYCLFGNTVNLTSRT 544


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 226 HRFPRQCL*SSKISFSNYT 282
           HR PR CL  + ++ ++ T
Sbjct: 526 HRMPRYCLFGNTVNLTSRT 544


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 462 FPRILSKGSIWSLRTKKDGIP 400
           F  ++++ S+W   T+K+ IP
Sbjct: 448 FFNMVTRDSVWCWDTRKEYIP 468


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 367 YMYYASFTG*LRDTILLCPKTPYASL*QDSG 459
           Y+Y       + D   +CP   +A L  D G
Sbjct: 441 YIYQKMVADVVGDYFFICPSIHFAQLFADRG 471


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 367 YMYYASFTG*LRDTILLCPKTPYASL*QDSG 459
           Y+Y       + D   +CP   +A L  D G
Sbjct: 441 YIYQKMVADVVGDYFFICPSIHFAQLFADRG 471


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,418
Number of Sequences: 438
Number of extensions: 2913
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)