Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H01
(599 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 294 7e-80
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 294 7e-80
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 294 7e-80
BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p pro... 34 0.13
BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p pro... 31 1.6
AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA... 31 1.6
BT025846-1|ABF85746.1| 1325|Drosophila melanogaster IP14385p pro... 29 4.8
AE014297-3323|AAF56132.3| 1348|Drosophila melanogaster CG4393-PA... 29 4.8
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 294 bits (721), Expect = 7e-80
Identities = 137/176 (77%), Positives = 152/176 (86%)
Frame = +2
Query: 8 VKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 187
++AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 188 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 367
IVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 368 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 535
AHSIQIIKV+ I AA RR VKQFH SKI FPL +RVH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 294 bits (721), Expect = 7e-80
Identities = 137/176 (77%), Positives = 152/176 (86%)
Frame = +2
Query: 8 VKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 187
++AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 188 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 367
IVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 368 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 535
AHSIQIIKV+ I AA RR VKQFH SKI FPL +RVH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 294 bits (721), Expect = 7e-80
Identities = 137/176 (77%), Positives = 152/176 (86%)
Frame = +2
Query: 8 VKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 187
++AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 188 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 367
IVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 368 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 535
AHSIQIIKV+ I AA RR VKQFH SKI FPL +RVH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p
protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 8 VKAKGELKEYEVIGRKLP 61
++AKG LKEYEV+GRKLP
Sbjct: 1 MRAKGLLKEYEVVGRKLP 18
>BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p
protein.
Length = 527
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 98 RIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPV 226
RI PI + S +++ L LKK EI S+ P K PV
Sbjct: 26 RILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA
protein.
Length = 527
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 98 RIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPV 226
RI PI + S +++ L LKK EI S+ P K PV
Sbjct: 26 RILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>BT025846-1|ABF85746.1| 1325|Drosophila melanogaster IP14385p protein.
Length = 1325
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 238 VLNLNRTLFWNFLDGYNFTSSLFELLQLP-QEIPE 137
+L+L R LF N D Y F +++FE +P IPE
Sbjct: 940 LLHLERILFENGYDNYKFVNNVFEEPDIPLLHIPE 974
>AE014297-3323|AAF56132.3| 1348|Drosophila melanogaster CG4393-PA
protein.
Length = 1348
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 238 VLNLNRTLFWNFLDGYNFTSSLFELLQLP-QEIPE 137
+L+L R LF N D Y F +++FE +P IPE
Sbjct: 940 LLHLERILFENGYDNYKFVNNVFEEPDIPLLHIPE 974
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,393,291
Number of Sequences: 53049
Number of extensions: 550290
Number of successful extensions: 1393
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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