Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_G24
         (424 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   190   7e-49
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   190   7e-49
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   190   7e-49
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   185   2e-47
AY075183-1|AAL68053.1|  388|Drosophila melanogaster AT13019p pro...    29   3.4  
AE013599-3908|AAF47233.2|  388|Drosophila melanogaster CG4681-PA...    29   3.4  
BT016016-1|AAV36901.1| 1340|Drosophila melanogaster RE21729p pro...    27   7.8  
AY069363-1|AAL39508.1|  232|Drosophila melanogaster LD06565p pro...    27   7.8  
AY058456-1|AAL13685.1|  491|Drosophila melanogaster GH25507p pro...    27   7.8  
AF312579-1|AAG41425.1| 1406|Drosophila melanogaster roundabout 2...    27   7.8  
AF199484-1|AAF13272.1|  491|Drosophila melanogaster sugar transp...    27   7.8  
AE014134-252|AAF51375.2| 1463|Drosophila melanogaster CG5481-PA ...    27   7.8  
AE013599-583|AAF59140.3|  491|Drosophila melanogaster CG17975-PA...    27   7.8  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  190 bits (463), Expect = 7e-49
 Identities = 90/105 (85%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = +2

Query: 113 KDIEKPQA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI 289
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 290 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 424
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEP
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEP 110


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  190 bits (463), Expect = 7e-49
 Identities = 90/105 (85%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = +2

Query: 113 KDIEKPQA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI 289
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 290 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 424
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEP
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEP 110


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  190 bits (463), Expect = 7e-49
 Identities = 90/105 (85%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = +2

Query: 113 KDIEKPQA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI 289
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 290 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 424
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEP
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEP 110


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  185 bits (451), Expect = 2e-47
 Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
 Frame = +2

Query: 113 KDIEKPQA-EISPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI 289
           KDIEKP   + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 290 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 424
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEP
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEP 110


>AY075183-1|AAL68053.1|  388|Drosophila melanogaster AT13019p
           protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +2

Query: 29  SALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSRNVRSLEKVC 208
           S  +N   E+ LSR +   +  AA    K + + Q +    HR  + L    +R+L++  
Sbjct: 284 SRQTNINLENRLSRVQ--EDADAARQELKLLREEQRDQLEAHRKELKLRDSRIRALKRQR 341

Query: 209 SDLINGAKKQ 238
            DL+N  KKQ
Sbjct: 342 GDLLNAYKKQ 351


>AE013599-3908|AAF47233.2|  388|Drosophila melanogaster CG4681-PA
           protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +2

Query: 29  SALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSRNVRSLEKVC 208
           S  +N   E+ LSR +   +  AA    K + + Q +    HR  + L    +R+L++  
Sbjct: 284 SRQTNINLENRLSRVQ--EDADAARQELKLLREEQRDQLEAHRKELKLRDSRIRALKRQR 341

Query: 209 SDLINGAKKQ 238
            DL+N  KKQ
Sbjct: 342 GDLLNAYKKQ 351


>BT016016-1|AAV36901.1| 1340|Drosophila melanogaster RE21729p protein.
          Length = 1340

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 152  GSVRSQPGASRYPFLTRQRLPCCCDIPVEINNFQIKN 42
            G+ +S P +S++  + RQ+LP  C I  E   F++ N
Sbjct: 1159 GAKQSSPISSQFASVRRQQLPPNCSIGRESARFKVLN 1195


>AY069363-1|AAL39508.1|  232|Drosophila melanogaster LD06565p
           protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 152 GSVRSQPGASRYPFLTRQRLPCCCDIPVEINNFQIKN 42
           G+ +S P +S++  + RQ+LP  C I  E   F++ N
Sbjct: 51  GAKQSSPISSQFASVRRQQLPPNCSIGRESARFKVLN 87


>AY058456-1|AAL13685.1|  491|Drosophila melanogaster GH25507p
           protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
 Frame = -2

Query: 327 VLEPSPQGVLRVVMRRTLVGIRTGPFTRSFCFLAPLMRSEQTF----SSERTLRDVSVIL 160
           +LE +P  +   V   T +G+  G        L+ L+ SE+ +    S    L   S++L
Sbjct: 152 LLESAPSELSGSVGVFTCIGVTGGILLAQVATLSHLLGSERLWPYALSFYSLLVMASLVL 211

Query: 159 IRWIGEISAWGFSISFPDTTAAAMLLRYSGRD-KQLSNQKLLSAEPEYSFVSS 4
           + W  E   W +        +   LLR  GR+ ++  +Q+LL  +      SS
Sbjct: 212 LWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLEAKSS 264


>AF312579-1|AAG41425.1| 1406|Drosophila melanogaster roundabout 2
            protein.
          Length = 1406

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 152  GSVRSQPGASRYPFLTRQRLPCCCDIPVEINNFQIKN 42
            G+ +S P +S++  + RQ+LP  C I  E   F++ N
Sbjct: 1225 GAKQSSPISSQFASVRRQQLPPNCSIGRESARFKVLN 1261


>AF199484-1|AAF13272.1|  491|Drosophila melanogaster sugar
           transporter 2 protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
 Frame = -2

Query: 327 VLEPSPQGVLRVVMRRTLVGIRTGPFTRSFCFLAPLMRSEQTF----SSERTLRDVSVIL 160
           +LE +P  +   V   T +G+  G        L+ L+ SE+ +    S    L   S++L
Sbjct: 152 LLESAPSELSGSVGVFTCIGVTGGILLAQVATLSHLLGSERLWPYALSFYSLLVMASLVL 211

Query: 159 IRWIGEISAWGFSISFPDTTAAAMLLRYSGRD-KQLSNQKLLSAEPEYSFVSS 4
           + W  E   W +        +   LLR  GR+ ++  +Q+LL  +      SS
Sbjct: 212 LWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLEAKSS 264


>AE014134-252|AAF51375.2| 1463|Drosophila melanogaster CG5481-PA
            protein.
          Length = 1463

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 152  GSVRSQPGASRYPFLTRQRLPCCCDIPVEINNFQIKN 42
            G+ +S P +S++  + RQ+LP  C I  E   F++ N
Sbjct: 1282 GAKQSSPISSQFASVRRQQLPPNCSIGRESARFKVLN 1318


>AE013599-583|AAF59140.3|  491|Drosophila melanogaster CG17975-PA
           protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
 Frame = -2

Query: 327 VLEPSPQGVLRVVMRRTLVGIRTGPFTRSFCFLAPLMRSEQTF----SSERTLRDVSVIL 160
           +LE +P  +   V   T +G+  G        L+ L+ SE+ +    S    L   S++L
Sbjct: 152 LLESAPSELSGSVGVFTCIGVTGGILLAQVATLSHLLGSERLWPYALSFYSLLVMASLVL 211

Query: 159 IRWIGEISAWGFSISFPDTTAAAMLLRYSGRD-KQLSNQKLLSAEPEYSFVSS 4
           + W  E   W +        +   LLR  GR+ ++  +Q+LL  +      SS
Sbjct: 212 LWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLEAKSS 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,230,413
Number of Sequences: 53049
Number of extensions: 438786
Number of successful extensions: 1216
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)