Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_G24
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-13|CAD21665.1| 117|Caenorhabditis elegans Hypothetical... 161 2e-40
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 29 1.4
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 28 2.4
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 3.2
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 3.2
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 3.2
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 3.2
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 3.2
U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical pr... 27 5.5
U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 27 5.5
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 27 5.5
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 27 5.5
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 27 5.5
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 27 5.5
Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 7.3
AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical ... 27 7.3
Z82265-4|CAB05174.1| 293|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 26 9.7
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 26 9.7
>AL132876-13|CAD21665.1| 117|Caenorhabditis elegans Hypothetical
protein Y105E8A.16 protein.
Length = 117
Score = 161 bits (391), Expect = 2e-40
Identities = 71/91 (78%), Positives = 86/91 (94%)
Frame = +2
Query: 152 HRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTW 331
HRIR+TLTS+NV+ LEKVC+ LI+GAK + L VKGP+RMPTKVLRITTRKTPCGEGSKTW
Sbjct: 17 HRIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKGPIRMPTKVLRITTRKTPCGEGSKTW 76
Query: 332 DRFQMRIHKRVIDLHSPSEIVKQITSINIEP 424
DRFQMRIHKR+I+LH+P+E+++QITSI+IEP
Sbjct: 77 DRFQMRIHKRLINLHAPAEVLRQITSISIEP 107
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 125 KPQAEISPIHRIRITLTSRNVRSLEKVCSDLINGAKK 235
+ +A+ SP HRI +TS+N CS L+ A++
Sbjct: 943 RSRAQSSPDHRILTLVTSKNAEQDTATCSTLLKRAER 979
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 194 LEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGE 316
+E V + + G KK+ + K + PTK +T++ P E
Sbjct: 359 VELVTAKTVEGEKKETKKPKSTTKKPTKTAAASTKRPPTTE 399
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 323 WNPHRKVFYVL*CGEPWSAFGLDPLHGVFV 234
W + + FY G+PWS+ G P+ G V
Sbjct: 1447 WPGYEEHFYAKNTGKPWSSGGFKPIAGAKV 1476
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 767 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 826
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 827 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 869
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 981 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 1040
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 1041 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 1083
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 1117 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 1176
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 1177 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 1219
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 1166 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 1225
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 1226 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 1268
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 1158 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 1217
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 1218 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 1260
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 1169 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 1228
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 1229 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 1271
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = +2
Query: 17 LYSGSALSNF*FESCLSRPEYRNNMAAAVVSGKDIEKPQAEISPIHRIRITLTSR--NVR 190
+Y G+ S E S E ++ + S A ISP HR ++ L + +V+
Sbjct: 1170 MYGGAQSSEVSAEILPSPQEENSSKETSSSSSSSSSSNTAHISPEHRFKVDLDQKFADVK 1229
Query: 191 SLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRI--TTRKTPCGEGSKTW 331
+ DL A Q V+ PV + L + + PCG+G K+W
Sbjct: 1230 REHEGREDL---AYSQ--MVQHPVTVSADCLEVYNASLSKPCGDG-KSW 1272
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 323 WNPHRKVFYVL*CGEPWSAFGLDPLHGVFV 234
W + + FY G+PWS+ G P+ G V
Sbjct: 72 WPGYEEHFYAKNTGKPWSSGGFKPIAGAKV 101
>U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical
protein F14D12.1a protein.
Length = 680
Score = 27.1 bits (57), Expect = 5.5
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 53 ESCLSRPEYRNNMAAAVVS-GKDIEKPQAEISPIHRIRITLTSRNVRSLEKVCSDLINGA 229
ES S E ++ A + +S K P ++P I S+ +L++ S I+
Sbjct: 550 ESMASSSESLSSDARSKISIKKRSNSPPRTVAPC--ILPKQPSQRTLTLQQQSSSSIDSL 607
Query: 230 KK-QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 388
Q R VR+PT++L + + G K+ F+ ++ + PS+
Sbjct: 608 NSTQTTRTTSSVRLPTRILVNQSSTSSEGSSGKSQHYFESKVGPKTSSTSHPSD 661
>U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical
protein F14D12.1b protein.
Length = 713
Score = 27.1 bits (57), Expect = 5.5
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 53 ESCLSRPEYRNNMAAAVVS-GKDIEKPQAEISPIHRIRITLTSRNVRSLEKVCSDLINGA 229
ES S E ++ A + +S K P ++P I S+ +L++ S I+
Sbjct: 550 ESMASSSESLSSDARSKISIKKRSNSPPRTVAPC--ILPKQPSQRTLTLQQQSSSSIDSL 607
Query: 230 KK-QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 388
Q R VR+PT++L + + G K+ F+ ++ + PS+
Sbjct: 608 NSTQTTRTTSSVRLPTRILVNQSSTSSEGSSGKSQHYFESKVGPKTSSTSHPSD 661
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 92 PCCCDIPVEINNF 54
PCC PVEINNF
Sbjct: 88 PCCNGSPVEINNF 100
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 89 MAAAVVSGKDIEKPQAEISPIH 154
++AA +S +D+EKP + P+H
Sbjct: 14 ISAAYISSEDLEKPSSADKPVH 35
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 89 MAAAVVSGKDIEKPQAEISPIH 154
++AA +S +D+EKP + P+H
Sbjct: 14 ISAAYISSEDLEKPSSADKPVH 35
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 131 QAEISPIHRIRITLTSRNVRSLEKVCSDLINGAK 232
Q+EIS I +IR TL + + K+ SDL G K
Sbjct: 1140 QSEISTIEKIRNTLNGDGYQGMYKLMSDLGLGWK 1173
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 131 QAEISPIHRIRITLTSRNVRSLEKVCSDLINGAK 232
Q+EIS I +IR TL + + K+ SDL G K
Sbjct: 1140 QSEISTIEKIRNTLNGDGYQGMYKLMSDLGLGWK 1173
>Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical
protein ZK1320.11 protein.
Length = 204
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 420 SILIEVICFTISEGECRSITRLWMR 346
S L+EVICF +S + + +WM+
Sbjct: 98 SSLMEVICFGLSSKQAVQVIDIWMK 122
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 298 TCCDAENLGRHSDWTLYT 245
TCCD E G +DW +T
Sbjct: 1195 TCCDPEKTGLWNDWGAWT 1212
>AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical
protein H12I13.1 protein.
Length = 592
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 179 RNVRSLEKVC-SDLINGAKKQKLRVKGPVRMPTKVLRITTRKT 304
R+ +S KVC + L GAKK++ + K+L IT KT
Sbjct: 364 RDNKSSNKVCRTSLSGGAKKKRKERNARSEVGDKILGITETKT 406
>Z82265-4|CAB05174.1| 293|Caenorhabditis elegans Hypothetical
protein F02H6.6 protein.
Length = 293
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 128 ASRYPFLTRQRLPCCCDIPVEINNFQIKNCSALNRSTALFP 6
A YP PCC P +NN+ +C++ +++T P
Sbjct: 78 ACNYPRTNGPGAPCCIGTPKIVNNWY--HCASTSQTTPTAP 116
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 236 QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSI 412
QK VK ++ + L++TT+K +G+K + K+ +D + +K++ ++
Sbjct: 855 QKQIVKRSLKRAIRKLKLTTKKDSQSKGTKQQKLVLLSYKKKKVDEKKFQQYLKEVENV 913
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 236 QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSI 412
QK VK ++ + L++TT+K +G+K + K+ +D + +K++ ++
Sbjct: 855 QKQIVKRSLKRAIRKLKLTTKKDSQSKGTKQQKLVLLSYKKKKVDEKKFQQYLKEVENV 913
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 236 QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSI 412
QK VK ++ + L++TT+K +G+K + K+ +D + +K++ ++
Sbjct: 855 QKQIVKRSLKRAIRKLKLTTKKDSQSKGTKQQKLVLLSYKKKKVDEKKFQQYLKEVENV 913
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,231,727
Number of Sequences: 27780
Number of extensions: 212882
Number of successful extensions: 655
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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