Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_G21
(399 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.32
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.32
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.32
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.32
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 0.97
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 0.97
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 1.3
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 1.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 2.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 2.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 3.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 3.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 6.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 6.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 6.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 6.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 20 9.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 20 9.1
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 20 9.1
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 20 9.1
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.32
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 273 INAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+N IH++ N+ Y I I + +P+ I Y + P P
Sbjct: 308 LNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 349
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.32
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 273 INAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+N IH++ N+ Y I I + +P+ I Y + P P
Sbjct: 319 LNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 360
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.32
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 273 INAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+N IH++ N+ Y I I + +P+ I Y + P P
Sbjct: 319 LNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 360
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.32
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 273 INAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+N IH++ N+ Y I I + +P+ I Y + P P
Sbjct: 308 LNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 349
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 0.97
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 252 DTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+ N+ + YI NI + IP+ + YY + P P
Sbjct: 110 NNNYKKLYKNYIINIEQ--IPVPVPVYYGNFPPRP 142
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 0.97
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 252 DTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+ N+ + YI NI + IP+ + YY + P P
Sbjct: 110 NNNYKKLYKNYIINIEQ--IPVPVPVYYGNFPPRP 142
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 5 AACSMNYVDPPVLHEFG 55
A C +++VDP V+ FG
Sbjct: 316 ATCYLSHVDPDVVQYFG 332
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein
protein.
Length = 238
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 5 AACSMNYVDPPVLHEFG 55
A C +++VDP V+ FG
Sbjct: 22 ATCYLSHVDPDVVQYFG 38
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 185 CIGICYLTIFRM*V*KKLQKFVSECIAALMSLH 283
C+GI +LT+ + + V+ I+ L+SLH
Sbjct: 255 CMGISFLTVLTFYLPSDSGEKVTLSISILISLH 287
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 185 CIGICYLTIFRM*V*KKLQKFVSECIAALMSLH 283
C+GI +LT+ + + V+ I+ L+SLH
Sbjct: 255 CMGISFLTVLTFYLPSDSGEKVTLSISILISLH 287
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 258 HSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+++ N+ Y I I + IPI + YY + +P P
Sbjct: 99 YNNNNYNKKLYYNINYIEQ--IPIPVPVYYGNFLPRP 133
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 258 HSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+++ N+ Y I I + IPI + YY + +P P
Sbjct: 99 YNNNNYNKKLYYNINYIEQ--IPIPVPVYYGNFLPRP 133
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 258 HSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+++ N+ Y I I + IPI + YY + +P P
Sbjct: 99 YNNNNYNKKLYYNINYIEQ--IPIPVPVYYGNFLPRP 133
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 258 HSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+++ N+ Y I I + IPI + YY + +P P
Sbjct: 99 YNNNNYNKKLYYNINYIEQ--IPIPVPVYYGNFLPRP 133
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 3.9
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -1
Query: 270 NAAIHSDTNFCSFFYTYIRNIVR*---HIPIQIHYYYSDKIPNP 148
N IH++ N Y N + +PI + YY + +P P
Sbjct: 87 NKTIHNNNNNYKKLQYYNINYIEQIPVPVPIPVPVYYGNFLPRP 130
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 3.9
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -1
Query: 330 ERRL*PDTSSAVDTLLCNDINAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPN 151
ER P S++ ++ N ++ N C Y I I + IP+ + YY + P
Sbjct: 74 ERSREPKIISSLSNKTIHNNNNYKYNYNNNCKKLYYNINYIEQIPIPVPV--YYGNFPPR 131
Query: 150 P 148
P
Sbjct: 132 P 132
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -1
Query: 246 NFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
N C Y I NI + +P+ + Y + P P
Sbjct: 349 NNCKKLYYNIINIEQIPVPVPVPIYCGNFPPRP 381
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -1
Query: 279 NDINAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
N+ N +++ N+ Y I I + IP+ + Y + P P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -1
Query: 279 NDINAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
N+ N +++ N+ Y I I + IP+ + Y + P P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -1
Query: 279 NDINAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
N+ N +++ N+ Y I I + IP+ + Y + P P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -1
Query: 279 NDINAAIHSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
N+ N +++ N+ Y I I + IP+ + Y + P P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = -1
Query: 258 HSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+++ N+ Y I NI + +P+ + Y + P P
Sbjct: 103 YNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPPRP 139
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = -1
Query: 258 HSDTNFCSFFYTYIRNIVR*HIPIQIHYYYSDKIPNP 148
+++ N+ Y I NI + +P+ + Y + P P
Sbjct: 103 YNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPPRP 139
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 20.2 bits (40), Expect = 9.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 178 MYLYRNMLSYYISNVSIKKTTKICIGMYRRV 270
+YLY+N +S T K I +RV
Sbjct: 377 VYLYQNTMSNNNQRTEWSATVKAAISEVQRV 407
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 20.2 bits (40), Expect = 9.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 178 MYLYRNMLSYYISNVSIKKTTKICIGMYRRV 270
+YLY+N +S T K I +RV
Sbjct: 415 VYLYQNTMSNNNQRTEWSATVKAAISEVQRV 445
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,642
Number of Sequences: 438
Number of extensions: 2254
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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