Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_G11
(428 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ821442-1|ABG91576.1| 573|Homo sapiens reverse transcriptase p... 45 1e-04
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 45 1e-04
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 44 2e-04
AF080231-1|AAC63291.1| 596|Homo sapiens polymerase protein. 44 2e-04
DQ058014-2|AAY87453.1| 135|Homo sapiens pol precursor protein. 44 2e-04
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 44 2e-04
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 44 2e-04
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 44 2e-04
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 44 2e-04
AF080234-1|AAC63294.1| 572|Homo sapiens polymerase protein. 44 2e-04
AF080233-1|AAC63293.1| 572|Homo sapiens polymerase protein. 44 2e-04
AF080232-1|AAC63292.1| 572|Homo sapiens polymerase protein. 44 2e-04
AF080229-1|AAC63290.1| 597|Homo sapiens polymerase protein. 44 2e-04
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 44 2e-04
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 44 2e-04
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 42 7e-04
AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein. 36 0.058
BC098445-1|AAH98445.1| 610|Homo sapiens WIZ protein protein. 32 0.72
AK131404-1|BAD18551.1| 794|Homo sapiens protein ( Homo sapiens ... 32 0.72
AK027615-1|BAB55234.1| 489|Homo sapiens protein ( Homo sapiens ... 32 0.72
AC007059-2|AAD19817.1| 893|Homo sapiens Human homolog of Mus mu... 32 0.72
AC007059-1|AAD19818.1| 1568|Homo sapiens Human homolog of Mus mu... 32 0.72
AC006128-1|AAC97985.1| 786|Homo sapiens Human homolog of Mus mu... 32 0.72
M74509-1|AAA73090.1| 395|Homo sapiens protein ( Human endogenou... 29 5.1
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 29 5.1
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 29 5.1
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 29 5.1
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 29 5.1
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 29 5.1
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 29 5.1
AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein. 29 5.1
Z93783-1|CAI20354.1| 1759|Homo sapiens protein ( Human DNA seque... 29 6.7
BC107110-1|AAI07111.1| 176|Homo sapiens TMEM95 protein protein. 29 6.7
BC040900-1|AAH40900.1| 226|Homo sapiens TMEM95 protein protein. 29 6.7
AL031589-2|CAI18813.1| 1759|Homo sapiens protein ( Human DNA seq... 29 6.7
AL022238-1|CAI18982.1| 1759|Homo sapiens protein ( Human DNA seq... 29 6.7
AB029016-1|BAA83045.2| 1727|Homo sapiens KIAA1093 protein protein. 29 6.7
BC069235-1|AAH69235.1| 577|Homo sapiens THAP domain containing ... 29 8.8
BC052585-1|AAH52585.1| 605|Homo sapiens podocalyxin-like 2 prot... 29 8.8
AY359096-1|AAQ89454.1| 605|Homo sapiens podocalyxin-like protei... 29 8.8
AK127568-1|BAC87038.1| 215|Homo sapiens protein ( Homo sapiens ... 29 8.8
AF258556-1|AAG23759.1| 577|Homo sapiens PP238 protein. 29 8.8
AF219137-1|AAF44629.1| 605|Homo sapiens endoglycan protein. 29 8.8
AC133528-4|AAY14918.1| 577|Homo sapiens unknown protein. 29 8.8
>DQ821442-1|ABG91576.1| 573|Homo sapiens reverse transcriptase
protein.
Length = 573
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV +L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 33 PVWVNQWQLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 92
Query: 82 NA 77
NA
Sbjct: 93 NA 94
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1177
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV +L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 956 PVWVNQWQLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 1015
Query: 82 NA 77
NA
Sbjct: 1016 NA 1017
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 956 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 1015
Query: 82 NARTIP 65
NA P
Sbjct: 1016 NALIQP 1021
>AF080231-1|AAC63291.1| 596|Homo sapiens polymerase protein.
Length = 596
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 32 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 91
Query: 82 NARTIP 65
NA P
Sbjct: 92 NALIQP 97
>DQ058014-2|AAY87453.1| 135|Homo sapiens pol precursor protein.
Length = 135
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 22 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 81
Query: 82 NA 77
NA
Sbjct: 82 NA 83
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 33 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 92
Query: 82 NA 77
NA
Sbjct: 93 NA 94
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 33 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 92
Query: 82 NA 77
NA
Sbjct: 93 NA 94
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1117
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 956 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 1015
Query: 82 NA 77
NA
Sbjct: 1016 NA 1017
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 956 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 1015
Query: 82 NA 77
NA
Sbjct: 1016 NA 1017
>AF080234-1|AAC63294.1| 572|Homo sapiens polymerase protein.
Length = 572
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 16 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 75
Query: 82 NA 77
NA
Sbjct: 76 NA 77
>AF080233-1|AAC63293.1| 572|Homo sapiens polymerase protein.
Length = 572
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 16 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 75
Query: 82 NA 77
NA
Sbjct: 76 NA 77
>AF080232-1|AAC63292.1| 572|Homo sapiens polymerase protein.
Length = 572
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 16 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 75
Query: 82 NA 77
NA
Sbjct: 76 NA 77
>AF080229-1|AAC63290.1| 597|Homo sapiens polymerase protein.
Length = 597
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 32 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 91
Query: 82 NA 77
NA
Sbjct: 92 NA 93
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 33 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 92
Query: 82 NA 77
NA
Sbjct: 93 NA 94
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G WR D R +
Sbjct: 33 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAV 92
Query: 82 NA 77
NA
Sbjct: 93 NA 94
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 42.3 bits (95), Expect = 7e-04
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
PV L KL+ + L G + PS SPW+SP+ + KK G W D R +
Sbjct: 956 PVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWHTLTDLRAV 1015
Query: 82 NA 77
NA
Sbjct: 1016 NA 1017
>AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein.
Length = 863
Score = 35.9 bits (79), Expect = 0.058
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 238 LAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQLNARTIP 65
L +KL L G ++PS SPW++P+ + KK G ++ D R +N + P
Sbjct: 33 LTQEKLAAVNDIVLQQLEAGHLQPSTSPWNTPVFVIKKKSGKYQLLHDLRAVNQQMQP 90
>BC098445-1|AAH98445.1| 610|Homo sapiens WIZ protein protein.
Length = 610
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 247 PRRLAPDKLKIA-KQEFDAMLMNGTVRPSDSPWSSPLH-LTP 128
P++L P+++++ K+E ++G + PS+ PW +P +TP
Sbjct: 132 PKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTP 173
>AK131404-1|BAD18551.1| 794|Homo sapiens protein ( Homo sapiens
cDNA FLJ16504 fis, clone FEBRA2014122, highly similar
to WizL. ).
Length = 794
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 247 PRRLAPDKLKIA-KQEFDAMLMNGTVRPSDSPWSSPLH-LTP 128
P++L P+++++ K+E ++G + PS+ PW +P +TP
Sbjct: 316 PKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTP 357
>AK027615-1|BAB55234.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14709 fis, clone NT2RP3000605, moderately
similar to Mus musculus mRNA for wizL. ).
Length = 489
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 247 PRRLAPDKLKIA-KQEFDAMLMNGTVRPSDSPWSSPLH-LTP 128
P++L P+++++ K+E ++G + PS+ PW +P +TP
Sbjct: 11 PKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTP 52
>AC007059-2|AAD19817.1| 893|Homo sapiens Human homolog of Mus
musculus wizS protein [AA 64-934] protein.
Length = 893
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 247 PRRLAPDKLKIA-KQEFDAMLMNGTVRPSDSPWSSPLH-LTP 128
P++L P+++++ K+E ++G + PS+ PW +P +TP
Sbjct: 415 PKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTP 456
>AC007059-1|AAD19818.1| 1568|Homo sapiens Human homolog of Mus
musculus wizL protein [AA 4-1561] protein.
Length = 1568
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 247 PRRLAPDKLKIA-KQEFDAMLMNGTVRPSDSPWSSPLH-LTP 128
P++L P+++++ K+E ++G + PS+ PW +P +TP
Sbjct: 1090 PKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTP 1131
>AC006128-1|AAC97985.1| 786|Homo sapiens Human homolog of Mus
musculus wizS protein [AA 171-934] protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 247 PRRLAPDKLKIA-KQEFDAMLMNGTVRPSDSPWSSPLH-LTP 128
P++L P+++++ K+E ++G + PS+ PW +P +TP
Sbjct: 308 PKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTP 349
>M74509-1|AAA73090.1| 395|Homo sapiens protein ( Human endogenous
retrovirus type C oncovirus sequence. ).
Length = 395
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 169 PSDSPWSSPLHLTPKK-DGGWRPCGDYRQLNARTI 68
P SPW++PL PK +RP D R +N T+
Sbjct: 195 PCQSPWNTPLLPVPKPGTKDYRPVQDLRLVNQATV 229
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 863 LLSQVVRPQESRSLSPSHLTEDRQGRWK 890
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 688 LLSQVVRPQESRSLSPSHLTEDRQGRWK 715
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 863 LLSQVVRPQESRSLSPSHLTEDRQGRWK 890
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 863 LLSQVVRPQESRSLSPSHLTEDRQGRWK 890
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 863 LLSQVVRPQESRSLSPSHLTEDRQGRWK 890
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 863 LLSQVVRPQESRSLSPSHLTEDRQGRWK 890
>AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein.
Length = 967
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGGWR 107
L++ VRP +S SP HLT + G W+
Sbjct: 162 LLSQVVRPQESRSLSPSHLTEDRQGRWK 189
>Z93783-1|CAI20354.1| 1759|Homo sapiens protein ( Human DNA sequence
from clone RP3-377F16 on chromosome 22. ).
Length = 1759
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -2
Query: 181 GTVRPSDSPWSS-PLHLTPKKD--GGW 110
G VRPS+S WSS P TPK + GW
Sbjct: 885 GNVRPSNSSWSSGPQPATPKDEEPSGW 911
>BC107110-1|AAI07111.1| 176|Homo sapiens TMEM95 protein protein.
Length = 176
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 349 EFPEITRPAGTNPVCTHNTVHY-IKTTEGPPVHCTPRR 239
+ PE TR A P C +T Y T +G V C PR+
Sbjct: 95 KLPEYTREALCPPACRGSTTLYNCSTCKGTEVSCWPRK 132
>BC040900-1|AAH40900.1| 226|Homo sapiens TMEM95 protein protein.
Length = 226
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 349 EFPEITRPAGTNPVCTHNTVHY-IKTTEGPPVHCTPRR 239
+ PE TR A P C +T Y T +G V C PR+
Sbjct: 118 KLPEYTREALCPPACRGSTTLYNCSTCKGTEVSCWPRK 155
>AL031589-2|CAI18813.1| 1759|Homo sapiens protein ( Human DNA
sequence from clone RP6-11O7 on chromosome 22q13.1-13.2.
).
Length = 1759
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -2
Query: 181 GTVRPSDSPWSS-PLHLTPKKD--GGW 110
G VRPS+S WSS P TPK + GW
Sbjct: 885 GNVRPSNSSWSSGPQPATPKDEEPSGW 911
>AL022238-1|CAI18982.1| 1759|Homo sapiens protein ( Human DNA
sequence from clone RP5-1042K10 on chromosome
22q13.1-13.2. ).
Length = 1759
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -2
Query: 181 GTVRPSDSPWSS-PLHLTPKKD--GGW 110
G VRPS+S WSS P TPK + GW
Sbjct: 885 GNVRPSNSSWSSGPQPATPKDEEPSGW 911
>AB029016-1|BAA83045.2| 1727|Homo sapiens KIAA1093 protein protein.
Length = 1727
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -2
Query: 181 GTVRPSDSPWSS-PLHLTPKKD--GGW 110
G VRPS+S WSS P TPK + GW
Sbjct: 854 GNVRPSNSSWSSGPQPATPKDEEPSGW 880
>BC069235-1|AAH69235.1| 577|Homo sapiens THAP domain containing 4
protein.
Length = 577
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/86 (22%), Positives = 35/86 (40%)
Frame = -2
Query: 382 TGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQE 203
+G K++ L + ++ P + + + C+ L PDK +A+
Sbjct: 226 SGACKFIGSLHSYSFSSKHTRERPSVPREPIDRKRLKKDVEPSCSGSSLGPDK-GLAQSP 284
Query: 202 FDAMLMNGTVRPSDSPWSSPLHLTPK 125
+ L +PS SP + P +TPK
Sbjct: 285 PSSSLTATPQKPSQSPSAPPADVTPK 310
>BC052585-1|AAH52585.1| 605|Homo sapiens podocalyxin-like 2
protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = -2
Query: 415 SSVTIASVKTMTGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRL 236
S A ++G+ + + L FP+ T P+G +T+ P+ L
Sbjct: 286 SEEATAGAAGLSGQHEEVPALPSFPQTTAPSGAEH--PDEDPLGSRTSASSPLAPGDMEL 343
Query: 235 APDKLKIAKQEFDAMLMNGTVRPSDS--PWSS 146
P + +++ + L+ G + S PW S
Sbjct: 344 TPSSATLGQEDLNQQLLEGQAAEAQSRIPWDS 375
>AY359096-1|AAQ89454.1| 605|Homo sapiens podocalyxin-like protein
protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = -2
Query: 415 SSVTIASVKTMTGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRL 236
S A ++G+ + + L FP+ T P+G +T+ P+ L
Sbjct: 286 SEEATAGAAGLSGQHEEVPALPSFPQTTAPSGAEH--PDEDPLGSRTSASSPLAPGDMEL 343
Query: 235 APDKLKIAKQEFDAMLMNGTVRPSDS--PWSS 146
P + +++ + L+ G + S PW S
Sbjct: 344 TPSSATLGQEDLNQQLLEGQAAEAQSRIPWDS 375
>AK127568-1|BAC87038.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ45661 fis, clone CTONG2026987. ).
Length = 215
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 283 IKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRP 104
+K+ P C + LK K +L +G ++P +SP++SP+ K D R
Sbjct: 10 LKSNHPYPAQCQ-YPIPQHALKGLKPVITCLLQHGLLKPINSPYNSPILPVQKLDKSHRL 68
Query: 103 CGDYR 89
D R
Sbjct: 69 VQDLR 73
>AF258556-1|AAG23759.1| 577|Homo sapiens PP238 protein.
Length = 577
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/86 (22%), Positives = 35/86 (40%)
Frame = -2
Query: 382 TGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQE 203
+G K++ L + ++ P + + + C+ L PDK +A+
Sbjct: 226 SGACKFIGSLHSYSFSSKHTRERPSVPREPIDRKRLKKDVEPSCSGSSLGPDK-GLAQSP 284
Query: 202 FDAMLMNGTVRPSDSPWSSPLHLTPK 125
+ L +PS SP + P +TPK
Sbjct: 285 PSSSLTATPQKPSQSPSAPPADVTPK 310
>AF219137-1|AAF44629.1| 605|Homo sapiens endoglycan protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = -2
Query: 415 SSVTIASVKTMTGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRL 236
S A ++G+ + + L FP+ T P+G +T+ P+ L
Sbjct: 286 SEEATAGAAGLSGQHEEVPALPSFPQTTAPSGAEH--PDEDPLGSRTSASSPLAPGDMEL 343
Query: 235 APDKLKIAKQEFDAMLMNGTVRPSDS--PWSS 146
P + +++ + L+ G + S PW S
Sbjct: 344 TPSSATLGQEDLNQQLLEGQAAEAQSRIPWDS 375
>AC133528-4|AAY14918.1| 577|Homo sapiens unknown protein.
Length = 577
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/86 (22%), Positives = 35/86 (40%)
Frame = -2
Query: 382 TGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQE 203
+G K++ L + ++ P + + + C+ L PDK +A+
Sbjct: 226 SGACKFIGSLHSYSFSSKHTRERPSVPREPIDRKRLKKDVEPSCSGSSLGPDK-GLAQSP 284
Query: 202 FDAMLMNGTVRPSDSPWSSPLHLTPK 125
+ L +PS SP + P +TPK
Sbjct: 285 PSSSLTATPQKPSQSPSAPPADVTPK 310
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,346,738
Number of Sequences: 237096
Number of extensions: 1461238
Number of successful extensions: 3422
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 3331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3418
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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