Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_G11
(428 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 78 6e-15
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 78 6e-15
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 73 2e-13
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 69 2e-12
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 67 1e-11
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 67 1e-11
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 66 2e-11
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 65 4e-11
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 61 5e-10
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 59 3e-09
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 58 7e-09
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 57 9e-09
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 56 2e-08
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 54 6e-08
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 53 2e-07
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 52 3e-07
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 52 4e-07
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 51 8e-07
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 51 8e-07
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 51 8e-07
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 51 8e-07
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 50 1e-06
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 50 1e-06
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 50 1e-06
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 50 1e-06
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 48 5e-06
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 48 5e-06
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 44 1e-04
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 43 2e-04
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 43 2e-04
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P... 31 0.87
AE013599-1922|AAO41391.1| 1633|Drosophila melanogaster CG12864-P... 31 0.87
AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-P... 28 4.6
X98402-1|CAA67052.1| 578|Drosophila melanogaster alkaline phosp... 27 8.1
M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth f... 27 8.1
K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental ... 27 8.1
BT023499-1|AAY84899.1| 1400|Drosophila melanogaster LD34134p pro... 27 8.1
AY075544-1|AAL68351.1| 596|Drosophila melanogaster RH35689p pro... 27 8.1
AL035436-2|CAB37610.1| 2704|Drosophila melanogaster EG:140G11.1,... 27 8.1
AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA ... 27 8.1
AE014297-4696|AAF57106.1| 596|Drosophila melanogaster CG1462-PA... 27 8.1
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 77.8 bits (183), Expect = 6e-15
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Frame = -2
Query: 415 SSVTIASVKTMTGESKY--LSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPR 242
+S+ V ++ E K LS+ K + +I + T+ H IKTT+ P+H
Sbjct: 149 ASLQALGVDHLSSEEKQSLLSLCKSYLDIFYNEDKSLTFTNKITHTIKTTDDTPIHTKSY 208
Query: 241 RLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKK-----DGGWRPCGDYRQLNA 77
R + K++ +AML ++ S SPWS+P+ + PKK + WR DYR+LN
Sbjct: 209 RYPYIHKEEVKKQIEAMLNQDIIKSSYSPWSAPVWVVPKKITPTGEQKWRLVIDYRKLNE 268
Query: 76 RTIPDRYPIRHIHDFTHNL 20
+TI DRYPI +I D L
Sbjct: 269 KTISDRYPIPNIADILDRL 287
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 77.8 bits (183), Expect = 6e-15
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Frame = -2
Query: 376 ESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFD 197
++K +++LKEF ++ G T+N H I+T+ PV+ P AP + +
Sbjct: 116 KAKLITLLKEFQDLQYKKGDQLTFTNNVKHTIRTSHNDPVYRKPYGYAPGLDTEVENQIK 175
Query: 196 AMLMNGTVRPSDSPWSSPLHLTPKK-----DGGWRPCGDYRQLNARTIPDRYPIRHIHDF 32
ML G +R S+SP+ SP+ + PKK +R DYR LN TI D+YPI ++ +
Sbjct: 176 EMLDQGIIRESNSPYCSPIVVVPKKPDISGQKKYRIAIDYRYLNEITIADKYPIPNMDEI 235
Query: 31 THNLSGC 11
L GC
Sbjct: 236 LSKLGGC 242
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Frame = -2
Query: 361 SILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMN 182
++ K+F +I T T+ H I T + P+H R K++ ++ML
Sbjct: 283 TLCKQFRDIFYNPETPLTFTNKITHSIPTIDNTPIHTKSYRYPFVHKTEVKKQIESMLDQ 342
Query: 181 GTVRPSDSPWSSPLHLTPKKDGG-----WRPCGDYRQLNARTIPDRYPIRHIHDFTHNL 20
+R S SPWS+P+ + PKK G WR DYR+LN +TI DRYPI +I+D ++
Sbjct: 343 QIIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVIDYRKLNDKTISDRYPIPNINDILDSI 401
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = -2
Query: 262 PVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQL 83
P C+PRRL+ + ++ D L NG +RPSDS ++SP+ L KK G R C D+R+L
Sbjct: 716 PFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYASPIVLVKKKTGDLRMCVDFRKL 775
Query: 82 NARTIPDRYPIRHIHDFTHNLS 17
N T+ D YP+ I D ++
Sbjct: 776 NKMTMKDNYPLPLIDDLLDRMN 797
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/78 (39%), Positives = 49/78 (62%)
Frame = -2
Query: 247 PRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQLNARTI 68
P RL+P++ ++ + + ++ VRPS SP++SP+ L KK+G R C D+R+LN+ TI
Sbjct: 462 PYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDRLCVDFRELNSNTI 521
Query: 67 PDRYPIRHIHDFTHNLSG 14
D+YP+ I D L G
Sbjct: 522 SDKYPLPLISDQIARLRG 539
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = -2
Query: 370 KYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAM 191
K +L +F + G T+ H + TT P++ LA + + M
Sbjct: 170 KLKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEM 229
Query: 190 LMNGTVRPSDSPWSSPLHLTPKKDGG-----WRPCGDYRQLNARTIPDRYPIRHIHDFTH 26
L G +R S+SP++SP + PKK +R DYR+LN TIPDRYPI ++ +
Sbjct: 230 LNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILG 289
Query: 25 NLSGCR 8
L C+
Sbjct: 290 KLGKCQ 295
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Frame = -2
Query: 361 SILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMN 182
S+L EF +I G N T T H I T P++ P + + + + M+
Sbjct: 162 SVLYEFSDIQYKEGENLTFTSTTKHVITTKHEDPIYRRPYKYPQSFDEEVENQMKDMIRQ 221
Query: 181 GTVRPSDSPWSSPLHLTPKKDGG-----WRPCGDYRQLNARTIPDRYPIRHIHDFTHNLS 17
G +R S+SP+ SP+ + PKK +R DYR LN T+ D+YPI + + L
Sbjct: 222 GIIRKSNSPYCSPVWVVPKKPDASGKSKFRIVIDYRNLNEITVDDKYPIPVMDEILDKLG 281
Query: 16 GCR 8
C+
Sbjct: 282 NCQ 284
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 64.9 bits (151), Expect = 4e-11
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Frame = -2
Query: 376 ESKY-LSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEF 200
E +Y L + K F + ++ H I TT+ P+H R +++
Sbjct: 145 EKQYILKLCKSFKRLFHNENNQLTFSNAIKHSIPTTDNIPIHTKSYRYPFVHKDEVRKQI 204
Query: 199 DAMLMNGTVRPSDSPWSSPLHLTPKKDGG-----WRPCGDYRQLNARTIPDRYPIRHIHD 35
ML ++ S SPWS+P+ + PKK WR D+R+LN +T+ DRYPI +I D
Sbjct: 205 SKMLEQNIIKNSHSPWSAPVWVVPKKSDNIGEKKWRLVIDFRKLNEKTVSDRYPIPNIAD 264
Query: 34 FTHNL 20
++
Sbjct: 265 ILDSI 269
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 61.3 bits (142), Expect = 5e-10
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = -2
Query: 361 SILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMN 182
S+L EFP I P + I+T P++ + +++ D +L +
Sbjct: 90 SLLGEFPRIFEPPLSGMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 149
Query: 181 GTVRPSDSPWSSPLHLTPKK-----DGGWRPCGDYRQLNARTIPDRYPIRHIH 38
G +RPS+SP++SP+ + PKK + +R D+++LN TIPD YPI I+
Sbjct: 150 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDIN 202
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Frame = -2
Query: 355 LKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGT 176
L E+ +I G N T H I+T PV+ P + + ++ M+ G
Sbjct: 249 LYEYRDIQYKEGENLTFTSTIKHVIQTQHEDPVYRKPYKYPQSVDQEVNKQIKEMIEQGI 308
Query: 175 VRPSDSPWSSPLHLTPKKDGG-----WRPCGDYRQLNARTIPDRYPIRHIHDFTHNLSGC 11
VR S SP+ SP+ + PKK +R DYR LN T+ D++PI + + L C
Sbjct: 309 VRKSKSPYCSPIWVVPKKADASGKQKFRLVVDYRNLNEITVNDKFPIPRMDEILDKLGRC 368
Query: 10 R 8
+
Sbjct: 369 Q 369
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 57.6 bits (133), Expect = 7e-09
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = -2
Query: 385 MTGESKY--LSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIA 212
+ E KY ++L F +I G T+ H I TT PV+ +
Sbjct: 126 LNAEEKYKLTNLLTRFKDIQFHEGDKLSFTNQEKHTINTTHNIPVYSKMYSFQQSYEQEV 185
Query: 211 KQEFDAMLMNGTVRPSDSPWSSPLHLTPKK-DGG----WRPCGDYRQLNARTIPDRYPIR 47
+++ ML G +R S SP+ SP+ + PKK D R DYR+LN TI DRYP+
Sbjct: 186 ERQIQEMLEQGIIRESSSPYCSPIWVVPKKLDASGQQKLRIVIDYRKLNEITINDRYPMP 245
Query: 46 HIHDFTHNL 20
+I + L
Sbjct: 246 NIDEILGKL 254
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 57.2 bits (132), Expect = 9e-09
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = -2
Query: 358 ILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNG 179
++++F I G + T H I T P++ + ++ ML G
Sbjct: 100 LIQKFEHIFYKEGQDLSFTSEIKHRIITKNDLPIYSKTYKYPEIHKDEVNRQIAEMLDQG 159
Query: 178 TVRPSDSPWSSPLHLTPKK-----DGGWRPCGDYRQLNARTIPDRYPIRHIHDFTHNLSG 14
+R S SP++SPL + KK WR DYR+LN TI DR+PI +I + L
Sbjct: 160 IIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNIDEIFDKLGD 219
Query: 13 CRL 5
C++
Sbjct: 220 CKI 222
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Frame = -2
Query: 376 ESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFD 197
+ + ++L+++ +I G T+ T H I T P++ + ++ Q D
Sbjct: 170 KQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQEVESQIQD 229
Query: 196 AMLMNGTVRPSDSPWSSPLHLTPKKDGG-----WRPCGDYRQLNARTIPDRYPIRHIHDF 32
ML G +R S+SP++SP+ + PKK +R DYR+LN T+ DR+PI ++ +
Sbjct: 230 -MLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEI 288
Query: 31 THNLSGC 11
L C
Sbjct: 289 LGKLGRC 295
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = -2
Query: 319 TNPVCTHNTVHY-IKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSP 143
T P+ +N ++ E PV+ R+A + ++ ++ +G V PS S ++SP
Sbjct: 49 TEPISANNFYKQKLRLGEKTPVYIKNYRMADSQKPEIARQVKKLIDDGIVEPSMSEYNSP 108
Query: 142 LHLTPKK------DGGWRPCGDYRQLNARTIPDRYPIRHIHDFTHNL 20
L L PKK + WR DYRQ+N + + D++P+ I D L
Sbjct: 109 LLLVPKKPLPNSTEKRWRLAVDYRQINKKLLSDKFPLPRIEDILDQL 155
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = -2
Query: 325 AGTNPVCTHNT--VHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPW 152
A N +NT V I+T + P++ E +L NG ++ S SP+
Sbjct: 135 ADPNEALPYNTSVVATIRTVDEEPIYAKLYPYPMGAADFVNGEIQELLKNGIIQKSKSPY 194
Query: 151 SSPLHLTPKK---DGG---WRPCGDYRQLNARTIPDRYPIRHIHDFTHNL 20
++P+ + KK D G R D+R+LN RT+PDRYP+ +I NL
Sbjct: 195 NNPIWVVDKKGTDDAGNKKMRLVLDFRKLNERTVPDRYPMPNISMILGNL 244
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 52.0 bits (119), Expect = 3e-07
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Frame = -2
Query: 364 LSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLM 185
L++ E PE P TN V T I+T + P++ +E A+L
Sbjct: 160 LAVFAE-PEEALPYNTNIVAT------IRTEDDQPIYSKLYPYPMGVSDFVNKETHALLK 212
Query: 184 NGTVRPSDSPWSSPLHLTPKK----DGGW--RPCGDYRQLNARTIPDRYPIRHIHDFTHN 23
+G +RPS SP+++P+ + KK +G R D+R+LN +TI D+YPI ++ N
Sbjct: 213 DGIIRPSSSPYNNPVWVVDKKGTDEEGNTKKRLVIDFRKLNLKTIDDKYPIPNVVWILSN 272
Query: 22 LSGCR 8
L R
Sbjct: 273 LGKAR 277
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 51.6 bits (118), Expect = 4e-07
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 140 TNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 199
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN +TIPDRYP+ I NL
Sbjct: 200 PTWVVDKKGTDASGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 247
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 50.8 bits (116), Expect = 8e-07
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 135 TNEALPFNTAVTATIRTVDNEPVYSRAYPNLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 194
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN RTIPDRYP+ I NL
Sbjct: 195 PTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANL 242
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 50.8 bits (116), Expect = 8e-07
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 135 TNEALPFNTAVTATIRTVDNEPVYSRAYPNLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 194
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN RTIPDRYP+ I NL
Sbjct: 195 PTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANL 242
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 50.8 bits (116), Expect = 8e-07
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = -2
Query: 358 ILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNG 179
I+ +P + T + I+T P++ + ++ +L +G
Sbjct: 163 IIDSYPGLFADPNQKLTYTTSVRAAIRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDG 222
Query: 178 TVRPSDSPWSSPLHLTPKK-DGG----WRPCGDYRQLNARTIPDRYPIRHIHD 35
+RPS SP++SP+ + PKK D +R DYR+LN T+ DRYPI I++
Sbjct: 223 IIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINE 275
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 50.8 bits (116), Expect = 8e-07
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = -2
Query: 358 ILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNG 179
I+ +P + T + I+T P++ + ++ +L +G
Sbjct: 6 IIDSYPGLFADPNQKLTYTTSVRAAIRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDG 65
Query: 178 TVRPSDSPWSSPLHLTPKK-DGG----WRPCGDYRQLNARTIPDRYPIRHIHD 35
+RPS SP++SP+ + PKK D +R DYR+LN T+ DRYPI I++
Sbjct: 66 IIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINE 118
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 135 TNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 194
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN +TIPDRYP+ I NL
Sbjct: 195 PTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 242
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 170 TNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 229
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN +TIPDRYP+ I NL
Sbjct: 230 PTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 277
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 170 TNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 229
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN +TIPDRYP+ I NL
Sbjct: 230 PTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 277
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = -2
Query: 319 TNPVCTHNTV--HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSS 146
TN NT I+T + PV+ E +L +G +RPS SP++S
Sbjct: 588 TNEALPFNTAVTATIRTVDNEPVYSRAYPTLMGVSDFVNNEVKQLLKDGIIRPSRSPYNS 647
Query: 145 PLHLTPKK--DGGWRPCG----DYRQLNARTIPDRYPIRHIHDFTHNL 20
P + KK D P D+R+LN +TIPDRYP+ I NL
Sbjct: 648 PTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 695
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Frame = -2
Query: 319 TNPVCTHNTV-HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSP 143
+ P+ +N ++ + PV+ R +++ + + ++ + V PS S ++SP
Sbjct: 294 SEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSP 353
Query: 142 LHLTPKKDGG------WRPCGDYRQLNARTIPDRYPIRHIHDFTHNL 20
L L PKK WR DYRQ+N + + D++P+ I D L
Sbjct: 354 LLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQL 400
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Frame = -2
Query: 319 TNPVCTHNTV-HYIKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSP 143
+ P+ +N ++ + PV+ R +++ + + ++ + V PS S ++SP
Sbjct: 57 SEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSP 116
Query: 142 LHLTPKKDGG------WRPCGDYRQLNARTIPDRYPIRHIHDFTHNL 20
L L PKK WR DYRQ+N + + D++P+ I D L
Sbjct: 117 LLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQL 163
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Frame = -2
Query: 319 TNPVCTHNTVHY-IKTTEGPPVHCTPRRLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSP 143
T P+ T+ I+ + P + R + ++ ++ + V P+ S ++SP
Sbjct: 188 TEPITTNKFYKQKIRLRDDEPSYIKNYRTPHSQQAEISRQVTKLIEDKIVEPAVSEYNSP 247
Query: 142 LHLTPKK------DGGWRPCGDYRQLNARTIPDRYPIRHIHDFTHNL 20
L L PKK + WR DYRQ+N + + D++P+ I D L
Sbjct: 248 LLLVPKKSLPDSKEKKWRLVIDYRQINKKLLADKFPLPRIDDILDQL 294
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = -2
Query: 241 RLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQLNARTIPD 62
RL+ ++ K++ + + VR S S +S + + KKDG R C DYR+LN + D
Sbjct: 189 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVKKKDGTLRVCVDYRKLNTMVLMD 248
Query: 61 RYPIRHIHDFTHNLSGCR 8
+P+ + + L +
Sbjct: 249 CFPVPIMEEVLEKLQSAK 266
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = -2
Query: 241 RLAPDKLKIAKQEFDAMLMNGTVRPSDSPWSSPLHLTPKKDGGWRPCGDYRQLNARTIPD 62
RL+ ++ K++ + + VR S S +S + + KKDG R C DYR+LN + D
Sbjct: 495 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMD 554
Query: 61 RYPIRHIHDFTHNLSGCR 8
+P+ + + L +
Sbjct: 555 CFPVPIMEEVLEKLQSAK 572
>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
isoform A protein.
Length = 3257
Score = 30.7 bits (66), Expect = 0.87
Identities = 28/83 (33%), Positives = 32/83 (38%)
Frame = -1
Query: 368 IPQHLERVSRDHASSRY*PCLHPQYSPLY*NYRGTSGTLYSTSSRT*QTKDSETGIRRNV 189
IPQ +++S DHA R P PLY R T G YS S T K S V
Sbjct: 3029 IPQQGKKISADHAQQR---SSLPATIPLYDGGRNTLGFPYSCSKSTAGRKSSYVATSTPV 3085
Query: 188 NERNS*TLRQPLVISTTPNAQKR 120
S Q + NAQ R
Sbjct: 3086 KASTS----QAAAAAALGNAQPR 3104
>AE013599-1922|AAO41391.1| 1633|Drosophila melanogaster CG12864-PB,
isoform B protein.
Length = 1633
Score = 30.7 bits (66), Expect = 0.87
Identities = 28/83 (33%), Positives = 32/83 (38%)
Frame = -1
Query: 368 IPQHLERVSRDHASSRY*PCLHPQYSPLY*NYRGTSGTLYSTSSRT*QTKDSETGIRRNV 189
IPQ +++S DHA R P PLY R T G YS S T K S V
Sbjct: 1405 IPQQGKKISADHAQQR---SSLPATIPLYDGGRNTLGFPYSCSKSTAGRKSSYVATSTPV 1461
Query: 188 NERNS*TLRQPLVISTTPNAQKR 120
S Q + NAQ R
Sbjct: 1462 KASTS----QAAAAAALGNAQPR 1480
>AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-PA
protein.
Length = 584
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = -2
Query: 424 SVPSSVTIASVKTMTGESKYLSILKEFPEITRPAGTNPVCTHNTVHYIKTTEGPPVHCTP 245
+ P T + T K ++ E+ TRP+ +P + T +E PP TP
Sbjct: 258 TTPPPTTTTTTTEFTFPGKTTALEMEYRYSTRPSWFSPTTSSTTTTEAAASEDPPKWTTP 317
Query: 244 R 242
+
Sbjct: 318 Q 318
>X98402-1|CAA67052.1| 578|Drosophila melanogaster alkaline
phosphatase protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 39 CI*RIGYLSGIVLAFSWR*SPHGLQPPSFLGVRCSGDDQG 158
C+ +G+L G ++AFSW + QPP + +G D G
Sbjct: 3 CLVILGFLLGSLVAFSW--AGVTTQPPPLIRTLSAGGDIG 40
>M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth factor
protein.
Length = 2703
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 272 CSFNIMDCIVGANRVSTCWTRDLWKLFQDAE 364
C+F+ DC +G N + C + W F++ +
Sbjct: 1505 CNFDGNDCSLGINPWANCTANECWNKFKNGK 1535
>K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental
protein protein.
Length = 2703
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 272 CSFNIMDCIVGANRVSTCWTRDLWKLFQDAE 364
C+F+ DC +G N + C + W F++ +
Sbjct: 1505 CNFDGNDCSLGINPWANCTANECWNKFKNGK 1535
>BT023499-1|AAY84899.1| 1400|Drosophila melanogaster LD34134p
protein.
Length = 1400
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 272 CSFNIMDCIVGANRVSTCWTRDLWKLFQDAE 364
C+F+ DC +G N + C + W F++ +
Sbjct: 202 CNFDGNDCSLGINPWANCTANECWNKFKNGK 232
>AY075544-1|AAL68351.1| 596|Drosophila melanogaster RH35689p
protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 39 CI*RIGYLSGIVLAFSWR*SPHGLQPPSFLGVRCSGDDQG 158
C+ +G+L G ++AFSW + QPP + +G D G
Sbjct: 3 CLVILGFLLGSLVAFSW--AGVTTQPPPLIRTLSAGGDIG 40
>AL035436-2|CAB37610.1| 2704|Drosophila melanogaster
EG:140G11.1,FBgn0004647;N protein.
Length = 2704
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 272 CSFNIMDCIVGANRVSTCWTRDLWKLFQDAE 364
C+F+ DC +G N + C + W F++ +
Sbjct: 1505 CNFDGNDCSLGINPWANCTANECWNKFKNGK 1535
>AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA
protein.
Length = 2703
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 272 CSFNIMDCIVGANRVSTCWTRDLWKLFQDAE 364
C+F+ DC +G N + C + W F++ +
Sbjct: 1505 CNFDGNDCSLGINPWANCTANECWNKFKNGK 1535
>AE014297-4696|AAF57106.1| 596|Drosophila melanogaster CG1462-PA,
isoform A protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 39 CI*RIGYLSGIVLAFSWR*SPHGLQPPSFLGVRCSGDDQG 158
C+ +G+L G ++AFSW + QPP + +G D G
Sbjct: 3 CLVILGFLLGSLVAFSW--AGVTTQPPPLIRTLSAGGDIG 40
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,135,135
Number of Sequences: 53049
Number of extensions: 467201
Number of successful extensions: 1211
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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