Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_G09
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   128   8e-32
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.48 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   2.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   3.4  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    22   5.9  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    22   5.9  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  128 bits (308), Expect = 8e-32
 Identities = 56/85 (65%), Positives = 69/85 (81%)
 Frame = +3

Query: 99  LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 278
           LFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK 
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKP 96

Query: 279 TGKGLFKILEKYQAETEAVRKERLK 353
           T + + K  +KY+ E    R +RLK
Sbjct: 97  TAQQVMKCWKKYRPENPIARVQRLK 121


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 188 YSHPASKGCVTASSQSAAANQPVHP 262
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 29  DREKSSGRSTCGEES*AQEDCKPS 100
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 277 PQAKVCSRSWRNTRQKLRQSGKSV*R 354
           PQ  +C+  W   +++L +  KS+ R
Sbjct: 213 PQIFICATMWHENKEELMEFLKSILR 238


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 218 TASSQSAAANQPVHPDIR*NHRQRSVQ 298
           +A+  SAA     HPD   +HR  S Q
Sbjct: 358 SANCSSAAPKSTAHPDHFLDHRSPSPQ 384


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 156 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPP 245
           D++R++ W K I+  R  A+  ++L+ P P
Sbjct: 343 DVARWLEWRKKIKEYRMTAM--KKLQPPKP 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,633
Number of Sequences: 2352
Number of extensions: 6538
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)