Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_G06
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.31 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   6.7  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 321 LNNYNDPNFVENMQQNNMH 377
           +NNYNDP+ V N +   +H
Sbjct: 158 VNNYNDPSNVRNCELVGLH 176


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
 Frame = -2

Query: 435 GVDTGSDDVL---QVLQQP 388
           GVDTG DD+L    V+ QP
Sbjct: 125 GVDTGVDDILGNNTVIHQP 143


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 330  YNDPNFVENMQQNNMHQREVVAAEPVI 410
            YN  N     Q N+  Q++  + EPVI
Sbjct: 1564 YNSGNNRSGEQANSQQQQQQQSGEPVI 1590


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 408 LQVLQQPLHADACC 367
           LQV +   H+D+CC
Sbjct: 343 LQVCRSRRHSDSCC 356


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = -1

Query: 292 SFSWPVVALVMA*AVFIRFRVAESPFSPSSELGF 191
           +F++P++ +V+     +  R     F+ S  +GF
Sbjct: 819 AFAYPIMLIVVCTVYAVLTRKIPEAFNESKHIGF 852


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 299 IVKFFMACSCVGNGLSSVYQIQSCRITLFSI 207
           +VK  +  SC  N L   +  Q C++ + S+
Sbjct: 154 MVKLTLKLSCAMNFLIYPHDTQECKLQMESL 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,954
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)