Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_G03
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.8  
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    24   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.4  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.4  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   8.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 59  ILFPLPILKDLPLPVSEP 6
           IL P PI+  LPLP+  P
Sbjct: 628 ILVPYPIIIPLPLPIPVP 645


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 593 CQTCGHPSQATEGCG 637
           C+ CG+  + T GCG
Sbjct: 3   CKCCGNDCKCTSGCG 17


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 174 PRPAAGPLRPVVRCPTVRYHTKVRAGRGFTL 266
           P P   P+R +++   V Y+ ++  G  F L
Sbjct: 437 PAPFGIPIRKIIKYKNVEYNNELGLGWSFPL 467


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 548 EELQSLSIPYRSSFYCQTCGHPSQATE 628
           EE  S+ I     F C  C HP  + E
Sbjct: 755 EEDGSIDISINGLFRCLLCTHPKASAE 781


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 528 RPITEDEKNFKAYQYLTGARSI 593
           + +TE EK F   +YLT AR I
Sbjct: 63  KQLTELEKEFHFNKYLTRARRI 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,468
Number of Sequences: 2352
Number of extensions: 12575
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)