Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_G02
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.4  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   3.2  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   3.2  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   3.2  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   3.2  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   4.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.7  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 203 VVIIYFYTRCYNEGVS 250
           +V+++FY R YN  VS
Sbjct: 261 LVMLFFYWRIYNAAVS 276


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 312 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 347


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 312 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 347


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 281 PSVHARALKLS*HLHYNNGYKNK*SLHRDTLYETFN 174
           P + +    LS + +YNN Y N    + + LY   N
Sbjct: 79  PKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 274 TLGVGNATVPFC 309
           T+G+GN T+  C
Sbjct: 148 TIGIGNTTIQAC 159


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 217 INNHYIETLYTKPLIVSLRKITAS 146
           I+N YI   YT P++  L++  +S
Sbjct: 21  ISNDYILDNYTSPIVEFLQQEDSS 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,284
Number of Sequences: 438
Number of extensions: 3123
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)