Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F19
(350 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 132 2e-30
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 118 3e-26
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 107 7e-23
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 97 1e-19
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 95 3e-19
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 95 3e-19
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 79 2e-14
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 72 2e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 70 1e-11
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 63 1e-09
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 62 2e-09
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 61 4e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 60 1e-08
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 58 5e-08
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 58 5e-08
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 56 2e-07
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 55 4e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 50 1e-05
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 49 3e-05
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 46 1e-04
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 3e-04
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 5e-04
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 44 0.001
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 41 0.007
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 40 0.012
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 0.33
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 35 0.44
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 34 0.58
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 34 0.58
UniRef50_Q7P0H5 Cluster: Putative uncharacterized protein; n=1; ... 33 1.8
UniRef50_Q1GJ02 Cluster: Acriflavin resistance protein; n=10; Rh... 33 1.8
UniRef50_Q2R0Z7 Cluster: Retrotransposon protein, putative, Ty1-... 33 1.8
UniRef50_Q9X551 Cluster: Plasmid partition protein homolog ParB;... 32 3.1
UniRef50_Q184E1 Cluster: Phage protein; n=1; Clostridium diffici... 32 3.1
UniRef50_A3IUD0 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_Q9XE87 Cluster: Polyprotein; n=1; Sorghum bicolor|Rep: ... 32 3.1
UniRef50_Q6F356 Cluster: Putative polyprotein; n=2; Oryza sativa... 32 3.1
UniRef50_A7RQH4 Cluster: Predicted protein; n=1; Nematostella ve... 32 3.1
UniRef50_Q5W6W4 Cluster: Putative uncharacterized protein OSJNBa... 31 4.1
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 31 4.1
UniRef50_Q4P1S4 Cluster: Putative uncharacterized protein; n=1; ... 31 4.1
UniRef50_Q1VV43 Cluster: Putative dephospho-CoA kinase; n=1; Psy... 31 5.4
UniRef50_Q7XH21 Cluster: Retrotransposon protein, putative, Ty1-... 31 7.2
UniRef50_Q53RJ9 Cluster: Reverse transcriptase (RNA-dependent DN... 31 7.2
UniRef50_Q0DP79 Cluster: Os03g0709500 protein; n=1; Oryza sativa... 31 7.2
UniRef50_Q55D24 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A7AQW1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 132 bits (319), Expect = 2e-30
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+I DGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 205 ARVRKNTECAQE 240
RVRKNTE ++
Sbjct: 61 YRVRKNTEARRK 72
Score = 65.3 bits (152), Expect = 3e-10
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RHCGFGKR+GTANARMP K LW+QRQ VLR+LL K
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKK 108
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 118 bits (284), Expect = 3e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+I DGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 205 ARVRKNT 225
AR RKNT
Sbjct: 61 ARCRKNT 67
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 204 RSCSQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
R+ +K+ + K RH G GKR+GTANARMP+K W++R +LR+LL
Sbjct: 60 RARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 106
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 107 bits (256), Expect = 7e-23
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = +1
Query: 49 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNT 225
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+I DGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNT 59
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 204 RSCSQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
R+ +K+ + K RH G GKR+GTANARMP+K W++R +LR+LL
Sbjct: 52 RARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLL 98
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 96.7 bits (230), Expect = 1e-19
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 205 ARVRKNT 225
A KNT
Sbjct: 61 AHCEKNT 67
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
K RH GK +GTAN +P++ W++R +L +LL
Sbjct: 69 KGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLL 103
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ D L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 205 ARVRKN 222
+R RKN
Sbjct: 61 SRCRKN 66
Score = 57.6 bits (133), Expect = 5e-08
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +3
Query: 204 RSCSQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
RS +K+ + K RH G GKR+GTA+ARMPQK LW++R VLR+LL
Sbjct: 60 RSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLL 106
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 95.1 bits (226), Expect = 3e-19
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+I DG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 205 ARVRKNTE 228
AR RK E
Sbjct: 81 ARWRKMKE 88
Score = 48.0 bits (109), Expect = 4e-05
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +3
Query: 246 RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
RH G G+R G+ ARMP KELW++R +LR+LL K
Sbjct: 94 RHNGVGRREGSREARMPSKELWMRRLRILRRLLRK 128
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 79.4 bits (187), Expect = 2e-14
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 205 ARVRKNTE 228
R+R E
Sbjct: 61 NRIRSRKE 68
Score = 39.5 bits (88), Expect = 0.016
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 213 SQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
S+K ++ G RH G GKR+G+ N+R K +W+ R V+R LL
Sbjct: 65 SRKEEIKLG--RHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLL 106
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 72.1 bits (169), Expect = 2e-12
Identities = 26/64 (40%), Positives = 50/64 (78%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++I +G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 205 ARVR 216
R R
Sbjct: 61 YRAR 64
Score = 38.3 bits (85), Expect = 0.036
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RH G G R+G ARM +KELW++ LRK L K
Sbjct: 72 KGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRK 108
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 69.7 bits (163), Expect = 1e-11
Identities = 26/57 (45%), Positives = 42/57 (73%)
Frame = +1
Query: 49 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRK 219
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++ D +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 63.3 bits (147), Expect = 1e-09
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++I D ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 205 ARVRKNTECAQE 240
R RK E ++
Sbjct: 61 GRCRKRLEAKKK 72
Score = 47.6 bits (108), Expect = 6e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
K RH G GKR GTANARMPQK++W+++ +R +L
Sbjct: 72 KGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAML 106
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 16 RAMMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAV 195
R+ + +L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ DGL+I+K +
Sbjct: 32 RSGAARAELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSATL 91
Query: 196 HSR 204
R
Sbjct: 92 ARR 94
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 61.3 bits (142), Expect = 4e-09
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 205 ARVRKNTE 228
R R E
Sbjct: 61 GRARSRAE 68
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 60.1 bits (139), Expect = 1e-08
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 205 ARVRK 219
R R+
Sbjct: 61 GRARE 65
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 57.6 bits (133), Expect = 5e-08
Identities = 22/59 (37%), Positives = 40/59 (67%)
Frame = +1
Query: 43 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRK 219
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++I G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRARE 64
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 57.6 bits (133), Expect = 5e-08
Identities = 23/69 (33%), Positives = 46/69 (66%)
Frame = +1
Query: 22 MMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHS 201
++ + +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +I +G++ KK S
Sbjct: 2 IIMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGIS 61
Query: 202 RARVRKNTE 228
ARV+K E
Sbjct: 62 SARVKKLKE 70
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 216 QKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
+K + + K R G G RRG A AR P KE W+ LRK L
Sbjct: 66 KKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTL 108
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 56.0 bits (129), Expect = 2e-07
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 205 ARVR 216
R+R
Sbjct: 61 GRIR 64
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +3
Query: 246 RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
RH G GKRRGT ARMP K LW+QRQ VLR+LL
Sbjct: 74 RHSGHGKRRGTREARMPSKTLWIQRQRVLRRLL 106
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 54.8 bits (126), Expect = 4e-07
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDG 168
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R +G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREG 48
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 246 RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
RH G+GKRRGT AR+P K LW++R VLR+LL K
Sbjct: 94 RHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSK 128
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +1
Query: 46 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNT 225
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 226 E 228
E
Sbjct: 67 E 67
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 219 KHRV-RAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
K R+ + K R G G RGT AR P+K W+ R LR+ L
Sbjct: 63 KKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRREL 105
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 48.8 bits (111), Expect = 3e-05
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1
Query: 22 MMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHS 201
M+ +L+ +KRLA+ V G +++ DP +++IA+ +R +IR +IT + KPV+ S
Sbjct: 1 MVINLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTS 60
Query: 202 RARVR 216
R R +
Sbjct: 61 RGRAQ 65
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Frame = +1
Query: 43 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 205 ARVRK 219
+R RK
Sbjct: 66 SRARK 70
Score = 37.5 bits (83), Expect = 0.063
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 204 RSCSQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
RS ++K + K R G G R+G+ANAR P+K W++ RK L
Sbjct: 65 RSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKEL 111
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 45.2 bits (102), Expect = 3e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 52 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKK 183
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -3
Query: 198 MDSNWFLDDQTIRDHLTDVLSGISISDFIDLVWIKPHLFFTAS 70
M SN DDQ I D L D+L+G+ I DF+ L+ ++P L FT +
Sbjct: 1 MASNRLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -3
Query: 222 VFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISDFIDL 106
VF+ S GMD + LDDQ I D ++D+L G+ I DFI L
Sbjct: 127 VFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFIGL 165
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDG-LVIKKPVAV 195
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +I DG +++ K V +
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI 58
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 39.9 bits (89), Expect = 0.012
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +1
Query: 22 MMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHS 201
M+ +LK +KRLA+ V G ++ D + + ++A+ +R+NIR +IT + K +
Sbjct: 1 MVVNLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTI--KIDSFTG 58
Query: 202 RARVRKNTECAQES 243
+R R T+ AQ +
Sbjct: 59 TSRGRAQTKKAQRN 72
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 0.33
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +1
Query: 43 QKRLAASVMRCGKKKVWLDPNEINEIAN 126
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 213 SQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
S+ ++ K R G G+R+G A AR+ KE W+ R +R+ L
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYL 107
Score = 34.3 bits (75), Expect = 0.58
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 37 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMITDGLV 174
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +I G++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVI 51
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 34.3 bits (75), Expect = 0.58
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 GFGKRRGTANARMPQKELWVQRQMVLRKLL 344
G + GTANARM +K W++R +L +LL
Sbjct: 532 GHREEEGTANARMSEKLTWMRRMRILHRLL 561
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 34.3 bits (75), Expect = 0.58
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 31 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPV-AVHS-R 204
++K K A+ +++CG K+ ++P + + + N+R+ I + ++IKK + V S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 205 ARVRK 219
++RK
Sbjct: 62 KKLRK 66
Score = 33.9 bits (74), Expect = 0.77
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 255 GFGKRRGTANARMPQKELWVQRQMVLRKLL 344
G G+R+GT NAR K LW+ + RKLL
Sbjct: 76 GIGRRKGTKNARKKYKILWIHKIRNQRKLL 105
>UniRef50_Q7P0H5 Cluster: Putative uncharacterized protein; n=1;
Chromobacterium violaceum|Rep: Putative uncharacterized
protein - Chromobacterium violaceum
Length = 329
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 58 ASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKP--VAVHSRARVRKNTEC 231
A+ + G+ +VWLDP +N + +N+ M+ +++ P V+++ + N +
Sbjct: 117 AAALTYGESEVWLDPYALNRVRQDGKLKNVGLMLGWSEILETPFRVSINYSRQKLDNEQS 176
Query: 232 AQESDVTVALVRGEVQLMLECHKKNYG 312
Q ++A Q +L+ + NYG
Sbjct: 177 GQAQGASLA-----NQALLKRNGNNYG 198
>UniRef50_Q1GJ02 Cluster: Acriflavin resistance protein; n=10;
Rhodobacteraceae|Rep: Acriflavin resistance protein -
Silicibacter sp. (strain TM1040)
Length = 1016
Score = 32.7 bits (71), Expect = 1.8
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 43 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIK-KPVAVHSRARVRK 219
++RL VMR ++ + N++ + S + +MI DG+ + + VH R RV
Sbjct: 742 RERLIPIVMRQPQEDPYNVMNQVVFSETSGSWIPLEQMI-DGISYEVQNTLVHRRDRVYT 800
Query: 220 NTECAQE-SDVTVALVRGEVQLMLECHKKNYGFKGKW 327
T A DVT A GEVQ +E + G+K +W
Sbjct: 801 ITVGADVLPDVTAATAFGEVQAAIEAIEVPVGYKMEW 837
>UniRef50_Q2R0Z7 Cluster: Retrotransposon protein, putative,
Ty1-copia subclass; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty1-copia subclass - Oryza sativa subsp. japonica (Rice)
Length = 626
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 234 RALCVFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
R L A+ + G+DSNW++D DH+T+ L +++ D
Sbjct: 106 RHLAAAASYAYGVDSNWYMDSGA-TDHITNELDKLTVCD 143
>UniRef50_Q9X551 Cluster: Plasmid partition protein homolog ParB;
n=1; Corynebacterium glutamicum|Rep: Plasmid partition
protein homolog ParB - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 265
Score = 31.9 bits (69), Expect = 3.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 284 ISCTSPLTKATVTSLSCAHSVFLRTRAREWTATG 183
I C L + T+ L+ AH V + T +++W+ +G
Sbjct: 130 IDCAPSLDQLTINGLTAAHGVLVVTHSKQWSLSG 163
>UniRef50_Q184E1 Cluster: Phage protein; n=1; Clostridium difficile
630|Rep: Phage protein - Clostridium difficile (strain
630)
Length = 157
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 106 EINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNTECAQESDVTVALVRGEVQLM 285
++N++ N+ R M + L+ K + A + TE A+ DVT +
Sbjct: 69 DLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEA---- 124
Query: 286 LECHKKNYGF 315
LEC+K YGF
Sbjct: 125 LECYKSKYGF 134
>UniRef50_A3IUD0 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 668
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 249 DVTFLRALCVFANTSA-GMDSNWFLDDQTIRDHLTDVL-SGISISDFIDLVWI 97
D T ++ C + N+S G + FL Q DHL DV+ + + F+D +++
Sbjct: 228 DDTNIKVACDYWNSSIIGQSNKLFLPKQDFLDHLNDVIDTSFEVMPFLDTIFV 280
>UniRef50_Q9XE87 Cluster: Polyprotein; n=1; Sorghum bicolor|Rep:
Polyprotein - Sorghum bicolor (Sorghum) (Sorghum
vulgare)
Length = 1012
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 216 ANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
A TS G+D+NW++D DH+T L ++I D
Sbjct: 275 AATSYGVDTNWYMDTGA-TDHITSELDQLTIRD 306
>UniRef50_Q6F356 Cluster: Putative polyprotein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative polyprotein -
Oryza sativa subsp. japonica (Rice)
Length = 1256
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 219 FANTSA--GMDSNWFLDDQTIRDHLTDVLSGISISD 118
+A T+A G+DSNW++D T DH+T L ++I D
Sbjct: 301 YAGTTASYGVDSNWYVDTGT-TDHVTGELEKLTIRD 335
>UniRef50_A7RQH4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 356
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -3
Query: 213 NTSAGMDSNWFLDDQTIRDHLTDVLSGISISDFIDLVWIKPHLFFTASHNRGC 55
N + ++NW+ + + TD++SG+ + L+ +F+T S GC
Sbjct: 253 NATGSDNTNWYQKSRLLESPWTDLVSGLLVPTKFVLIGCCSRMFYTMSGEGGC 305
>UniRef50_Q5W6W4 Cluster: Putative uncharacterized protein
OSJNBa0065C11.13; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0065C11.13 - Oryza sativa subsp. japonica (Rice)
Length = 760
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 216 ANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
A TS G+D+NW++D DH+T L +++ D
Sbjct: 232 ATTSYGIDTNWYVDTGA-TDHITGELDKLTVRD 263
>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 655
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 79 KKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNTECAQESDVTVA 258
KK +W DP +N IA + K++ L K H ++TE E D+ A
Sbjct: 189 KKNIWNDPKSVNVIATVGCFSKVTKVLVTSL---KFFLGHDDEDEEEDTESENEVDLKGA 245
Query: 259 LVRGEV 276
L+ V
Sbjct: 246 LLANRV 251
>UniRef50_Q4P1S4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 224
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Frame = +1
Query: 67 MRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNT----ECA 234
M C +P+ + + R NI + T +++ V A + K+T C
Sbjct: 1 MSCSSLHHGHEPSTLASTLLSTIRSNIIPLTTSA--VERGCKVFGAAILSKSTLSPIVCC 58
Query: 235 QESDVTVALVRGEVQLMLECHKKNYGFKGK 324
++T L+ GE+ +LE HK N K
Sbjct: 59 TNDEITSPLLHGEINTLLEFHKHNNALASK 88
>UniRef50_Q1VV43 Cluster: Putative dephospho-CoA kinase; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
dephospho-CoA kinase - Psychroflexus torquis ATCC 700755
Length = 195
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 7 GSHRAMMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKP 186
G+ + +++++ K + + KK+ DP+ + E+ANT NI + TDGL+ K
Sbjct: 11 GTGKTLVANMFKNKNIPVFIADVEAKKILNDPSVVKEVANT---FNI-SLTTDGLIDKSE 66
Query: 187 VA 192
+A
Sbjct: 67 LA 68
>UniRef50_Q7XH21 Cluster: Retrotransposon protein, putative,
Ty1-copia subclass; n=3; Oryza sativa|Rep:
Retrotransposon protein, putative, Ty1-copia subclass -
Oryza sativa subsp. japonica (Rice)
Length = 1058
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 213 NTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
++S G+D+NW++D DH+T + +S+ D
Sbjct: 256 SSSYGIDTNWYVDSNA-TDHITGEMEKLSVKD 286
>UniRef50_Q53RJ9 Cluster: Reverse transcriptase (RNA-dependent DNA
polymerase), putative; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Reverse transcriptase
(RNA-dependent DNA polymerase), putative - Oryza sativa
subsp. japonica (Rice)
Length = 757
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -3
Query: 228 LCVFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
+ A +S G+D+NW+++ + DH+T L ++++D
Sbjct: 164 IAAVATSSYGVDTNWYINTRA-TDHITGELEKLTVND 199
>UniRef50_Q0DP79 Cluster: Os03g0709500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0709500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 410
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -3
Query: 228 LCVFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
+ A +S G+D+NW+++ + DH+T L ++++D
Sbjct: 107 IAAVATSSYGVDTNWYINTRA-TDHITGELEKLTVND 142
>UniRef50_Q55D24 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 92
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 22 MMSSLKLQKRLAASVMRCGKKKVWLDPNEINEI---ANTNSRQNIRKMITDGLVIKKP 186
++ SLK Q+++ +++RC K ++ P+E ++ N N R+ I++MI + P
Sbjct: 17 VLYSLKHQEKIIDNLIRCDKASIFAKPSEDDKSYVPPNQNQRELIKEMINSLSYVSLP 74
>UniRef50_A7AQW1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 215
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 225 CVFANTSAGMDSNWFLDD--QTIRDHLTDVLSGISISDFIDLVWIKPHLFFTASHNRGCK 52
C N A ++N FL D + D+LT VL GI + + ++ + PH + G
Sbjct: 30 CSLMNRIAKWNANVFLYDYSEAAYDYLTSVLGGILDVECLYIIGVNPHTIVAYGRSIGSG 89
Query: 51 P 49
P
Sbjct: 90 P 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,359,044
Number of Sequences: 1657284
Number of extensions: 6327885
Number of successful extensions: 17942
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 17594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17938
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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