Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F19
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 107 2e-24
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 106 4e-24
02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212 29 1.4
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 28 2.4
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 28 2.4
04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800 28 2.4
02_05_1287 - 35459419-35459955,35460043-35460966,35461881-354622... 27 3.1
12_01_0773 - 7039294-7039422,7039440-7039479,7039557-7039649,703... 27 4.1
07_01_0075 - 558829-560859 27 4.1
06_01_0668 - 4882174-4884204 27 4.1
06_01_1036 + 8134132-8134539,8134885-8134956,8134969-8135088,813... 27 5.5
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 27 5.5
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 27 5.5
08_01_0639 + 5544411-5544413,5545000-5545343,5546420-5546849 26 7.2
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 26 7.2
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 26 7.2
02_05_1284 - 35449589-35450125,35450255-35451166,35451298-35451333 26 7.2
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 26 9.6
07_01_0326 + 2285964-2286431 26 9.6
04_04_0548 + 26172595-26173189,26173346-26173473,26173606-261738... 26 9.6
04_03_0266 + 13648287-13649099,13649186-13649524 26 9.6
03_04_0109 + 17354914-17355250,17355812-17355903 26 9.6
02_05_1288 + 35466544-35466579,35466691-35467590,35467695-35468231 26 9.6
02_05_1089 + 34019162-34019164,34019249-34019465,34019558-340197... 26 9.6
01_07_0069 + 40869496-40869535,40869627-40869663,40870241-408703... 26 9.6
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 107 bits (258), Expect = 2e-24
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++ DG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 205 ARVRKNTECAQE 240
+R R+ E Q+
Sbjct: 61 SRARRAHEAKQK 72
Score = 52.8 bits (121), Expect = 7e-08
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 204 RSCSQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
RS +++ K RH G+GKRRGT AR+P K LW++R VLR+LL K
Sbjct: 60 RSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRK 108
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 106 bits (255), Expect = 4e-24
Identities = 47/72 (65%), Positives = 59/72 (81%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++ DG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 205 ARVRKNTECAQE 240
+R R+ E Q+
Sbjct: 61 SRARRAHEAKQK 72
Score = 52.8 bits (121), Expect = 7e-08
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 204 RSCSQKHRVRAGK*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
RS +++ K RH G+GKRRGT AR+P K LW++R VLR+LL K
Sbjct: 60 RSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRK 108
>02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212
Length = 297
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 145 IRKMITDGLVIKKPVAVHSRA 207
+RK IT+GLV+ P AVH R+
Sbjct: 277 LRKQITEGLVMASPHAVHFRS 297
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 49 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMITDGLV 174
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 234 RALCVFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISDFIDLVWIK 94
+ L + S G+ F + I DHL + +G + I +VWI+
Sbjct: 1274 KTLLRYVRQSPGVTEPCFSRGRVITDHLLKISNGAQRWELISMVWIE 1320
>04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800
Length = 456
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 247 RHFPARTLCFCEHERGNGQQLVS**PDHP*SSYGCSVW 134
RH PA + CE+ G G + + PD +G + W
Sbjct: 286 RHLPAHSFGRCENNVGGGDKALELYPDCARDGHGAAEW 323
>02_05_1287 -
35459419-35459955,35460043-35460966,35461881-35462268,
35463645-35463748,35464740-35464928,35465231-35465362
Length = 757
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 124 NTNSRQNIRKMITDGLVIKKPVAVHSRA 207
N ++ +RK IT+GLV+ P +H R+
Sbjct: 730 NIVEQELLRKQITEGLVMASPHVIHFRS 757
>12_01_0773 -
7039294-7039422,7039440-7039479,7039557-7039649,
7039900-7040010,7040091-7040342,7040407-7040903,
7040923-7041777,7041883-7042143,7042183-7042551,
7042637-7042876
Length = 948
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 135 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 43
GIS+ D +DLV W K +FF N G KP+L
Sbjct: 462 GISVLGDAVDLVILWHKNDIFFGLGTNAGEKPVL 495
>07_01_0075 - 558829-560859
Length = 676
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 207 SAGMDSNWFL-DDQTIRDHLTDVLSGISISDFID 109
SA + ++ L DD+ D L ++L G +++DF+D
Sbjct: 429 SASLKKHYLLADDEWKEDILPEILDGHNVADFLD 462
>06_01_0668 - 4882174-4884204
Length = 676
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 207 SAGMDSNWFL-DDQTIRDHLTDVLSGISISDFID 109
SA + ++ L DD+ D L ++L G +++DF+D
Sbjct: 429 SASLKKHYLLADDEWKEDILPEILDGHNVADFLD 462
>06_01_1036 +
8134132-8134539,8134885-8134956,8134969-8135088,
8135179-8135256,8135442-8135697,8136427-8136515,
8137229-8137376,8137460-8137899,8138048-8138562,
8138791-8139061,8139231-8139492,8139583-8139938
Length = 1004
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -3
Query: 216 ANTSAGMDSNWFLDDQTIRDHLTDVLSGISISDFIDLVWIKPHLFFTASHNRGCKPLL 43
A T+ G ++ + + + ++ L D + +ISD++DLV K HL +++ + LL
Sbjct: 347 AATTTGTEAAVYASEASDKNDLLDSVLPSTISDYVDLV--KAHLSAGPNYHFASRQLL 402
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 329 HHLPLNP*FFLWHSSIS--CTSPLTKATVTSLSCAHSVFLRTRAREWTATGFLMTRPSV 159
H P +P L+ +S S C+S + ++ + +V + T A E +TG + + PSV
Sbjct: 14 HLAPFSPPLLLFFASASSSCSSAASPSSASGPRGCSAVRMETGAVEPASTGAIWSTPSV 72
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 205 ARVRKNT 225
NT
Sbjct: 162 IENSPNT 168
>08_01_0639 + 5544411-5544413,5545000-5545343,5546420-5546849
Length = 258
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -1
Query: 227 SVFLRTRAREWTATGFLMTRPSVIILRMFCLELVLAISLISFGSSHTFFLPH 72
S+ L +R+W+ M SVI ++ +EL++ L+ H LPH
Sbjct: 11 SMLLPPESRDWSELP--MDAFSVIFAKLGAIELLMGAGLVCHSWLHAAKLPH 60
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 183 TSCCPFPRSCSQKHRVRAGK 242
T CPF SC KH R G+
Sbjct: 312 TGTCPFGSSCFYKHAYRDGR 331
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -3
Query: 159 DHLTDVLSGISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 43
D+LT GIS+ D +DLV W K +FF + G KP+L
Sbjct: 457 DYLT--ADGISVLGDAVDLVILWHKNDIFFGLGTDAGEKPVL 496
>02_05_1284 - 35449589-35450125,35450255-35451166,35451298-35451333
Length = 494
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 145 IRKMITDGLVIKKPVAVHSRA 207
+RK IT+GLV+ P +H R+
Sbjct: 474 LRKQITEGLVMVSPHVIHFRS 494
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 25.8 bits (54), Expect = 9.6
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 16 RAMMSSLKLQKRLAASVMRCGKKKVWLD-PNEINEIANTNSRQNIRKMITDGLVIKKPVA 192
+A LK + +AS ++ + L+ P+E++E N+ + D ++ P +
Sbjct: 652 KARQEHLKSMQEQSASKLKSNNIGISLEAPSEVSEYVGDGHIVNLARE-EDEAPVRIPSS 710
Query: 193 VHSRARVRKNTECAQESDVTVALVRGEVQLMLECHKK 303
+ ++ + + +T+ LV VQL L C++K
Sbjct: 711 ISAKLK-------PHQYRITITLVMISVQLYLYCYRK 740
>07_01_0326 + 2285964-2286431
Length = 155
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 165 WSGHQETSCCPFPRSCSQKHRVRAGK*RHCGFGKRRG-TANARMPQKELW 311
W Q + C F R C Q+ RA G G+ RG T R+ W
Sbjct: 54 WESRQSCNTCIFGRCCGQQLSPRAILILSFGGGRVRGYTPPGRLTLPSSW 103
>04_04_0548 +
26172595-26173189,26173346-26173473,26173606-26173866,
26173988-26174250,26176748-26177099
Length = 532
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -1
Query: 287 SISCTSPLTKATVTSLSCAHSVFLRTRARE 198
++S T+P +ATV ++ HS+ + +AR+
Sbjct: 73 ALSSTAPSPRATVAAVGAGHSLHGQAQARD 102
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 79 KKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNT 225
K+K+ L +E ++ T R+ RK+ + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>03_04_0109 + 17354914-17355250,17355812-17355903
Length = 142
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 148 RKMITDGLVIKKPVAVHSRAR 210
R M+ DG+++++ VAV SR R
Sbjct: 114 RCMVFDGMMVRRRVAVRSRGR 134
>02_05_1288 + 35466544-35466579,35466691-35467590,35467695-35468231
Length = 490
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 145 IRKMITDGLVIKKPVAVHSRA 207
+RK IT+GLV+ P +H R+
Sbjct: 470 LRKQITEGLVMALPHVIHFRS 490
>02_05_1089 +
34019162-34019164,34019249-34019465,34019558-34019714,
34019935-34020071,34020387-34020490,34020593-34020688,
34020818-34020908,34021384-34021504,34021579-34021775,
34022605-34022705,34022778-34022833,34023689-34023778,
34023865-34023964,34024194-34024295,34024372-34024441,
34024696-34024850,34024944-34025068,34025126-34025144
Length = 646
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 179 LMTRPSVIILRMFCLELVLAISLISFGSSHTFFLP 75
++++ S + + C EL+ I++ S G +HTF P
Sbjct: 122 IVSKSSDLAITEECFELLSLIAIASDGGAHTFCEP 156
>01_07_0069 +
40869496-40869535,40869627-40869663,40870241-40870387,
40872360-40872405,40872580-40872846,40873151-40873540
Length = 308
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 220 NTECAQESDVTVALVRGEVQLMLECHKKNYGFKGKWCSVSCC 345
N C + +V V G+ +L+ KKN+G W SCC
Sbjct: 154 NYACRRSREVFVMDSGGKT--LLKLLKKNFGVFKTWQGYSCC 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,937,462
Number of Sequences: 37544
Number of extensions: 188279
Number of successful extensions: 508
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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