Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F19
         (350 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   3.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    22   5.8  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          22   5.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   5.8  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 219 FANTSAGMDSNWFLDDQTIRDHLT 148
           F + S   D+NW + D+T  DH T
Sbjct: 184 FCSPSLVGDNNWRVCDETPSDHNT 207


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 73   CGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKP 186
            CG K++ +DP    E+        +R+M  + ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 248 TSLSCAHSVFLRTRAREW 195
           T L+C   +F+R + R W
Sbjct: 254 TVLACLDGLFIREKERNW 271


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 249 DVTFLRALCVFANTSAGMDSNWFLDDQTIR 160
           DVTF     V  NT   + S W+ D + +R
Sbjct: 173 DVTFASPSIVRYNTWEVLKSYWYSDHRYVR 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,178
Number of Sequences: 2352
Number of extensions: 6915
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)