Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F19
(350 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 132 1e-31
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 132 1e-31
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 132 1e-31
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 132 1e-31
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 132 1e-31
AY075546-1|AAL68353.1| 308|Drosophila melanogaster RH45455p pro... 27 6.7
AE014298-1823|AAF48211.2| 308|Drosophila melanogaster CG4404-PA... 27 6.7
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 27 8.9
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 27 8.9
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 132 bits (319), Expect = 1e-31
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+I DGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 205 ARVRKNTECAQE 240
RVRKNTE ++
Sbjct: 61 YRVRKNTEARRK 72
Score = 60.9 bits (141), Expect = 4e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RHCGFGKR+GTANARMP K LW+QRQ R+LL K
Sbjct: 72 KDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKK 108
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 132 bits (319), Expect = 1e-31
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+I DGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 205 ARVRKNTECAQE 240
RVRKNTE ++
Sbjct: 66 YRVRKNTEARRK 77
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RHCGFGKR+GTANARMP K LW+QRQ VLR+LL K
Sbjct: 77 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKK 113
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 132 bits (319), Expect = 1e-31
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+I DGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 205 ARVRKNTECAQE 240
RVRKNTE ++
Sbjct: 79 YRVRKNTEARRK 90
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RHCGFGKR+GTANARMP K LW+QRQ VLR+LL K
Sbjct: 90 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKK 126
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 132 bits (319), Expect = 1e-31
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+I DGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 205 ARVRKNTECAQE 240
RVRKNTE ++
Sbjct: 61 YRVRKNTEARRK 72
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RHCGFGKR+GTANARMP K LW+QRQ VLR+LL K
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKK 108
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 132 bits (319), Expect = 1e-31
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+I DGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 205 ARVRKNTECAQE 240
RVRKNTE ++
Sbjct: 61 YRVRKNTEARRK 72
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLLLK 350
K RHCGFGKR+GTANARMP K LW+QRQ VLR+LL K
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKK 108
>AY075546-1|AAL68353.1| 308|Drosophila melanogaster RH45455p
protein.
Length = 308
Score = 27.1 bits (57), Expect = 6.7
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +1
Query: 16 RAMMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAV 195
R + SS +LA + GK+K +L + T SR +++ G+V++KP
Sbjct: 65 RTIRSSFLRSLKLARTQTGRGKRKYYLSKYLQFLVPFTKSRSCHKQL--PGMVLRKPGQA 122
Query: 196 HSRARVRKNTECAQESDVTVALVRGEVQLMLECHKKN 306
+ + + +E+ V+ + +VQ+ E H++N
Sbjct: 123 ATAQQEDEVVAAEEEAKVSDGEMPLDVQVSEEEHRRN 159
>AE014298-1823|AAF48211.2| 308|Drosophila melanogaster CG4404-PA
protein.
Length = 308
Score = 27.1 bits (57), Expect = 6.7
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +1
Query: 16 RAMMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAV 195
R + SS +LA + GK+K +L + T SR +++ G+V++KP
Sbjct: 65 RTIRSSFLRSLKLARTQTGRGKRKYYLSKYLQFLVPFTKSRSCHKQL--PGMVLRKPGQA 122
Query: 196 HSRARVRKNTECAQESDVTVALVRGEVQLMLECHKKN 306
+ + + +E+ V+ + +VQ+ E H++N
Sbjct: 123 ATAQQEDEVVAAEEEAKVSDGEMPLDVQVSEEEHRRN 159
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
Length = 5233
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 115 EIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKN 222
E+AN + NIR + L ++H+R++ RKN
Sbjct: 3455 EVANAGNYLNIRPSTLETLTKSGNCSLHNRSKYRKN 3490
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 115 EIANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKN 222
E+AN + NIR + L ++H+R++ RKN
Sbjct: 3455 EVANAGNYLNIRPSTLETLTKSGNCSLHNRSKYRKN 3490
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,109,875
Number of Sequences: 53049
Number of extensions: 302556
Number of successful extensions: 746
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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