Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F19
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal pro... 101 1e-22
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 29 0.94
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 29 1.2
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 29 1.2
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 1.6
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 1.6
Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z68319-2|CAA92700.2| 446|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 27 5.0
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 27 5.0
Z81056-7|CAB02909.1| 309|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical pr... 26 6.6
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 26 6.6
Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 26 8.7
AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical ... 26 8.7
>AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 19 protein.
Length = 198
Score = 101 bits (242), Expect = 1e-22
Identities = 42/72 (58%), Positives = 61/72 (84%)
Frame = +1
Query: 25 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSR 204
MS+L+LQKRLA++V++CGK +VWLDPNE++EI+ NSRQ+IR+++ DGL+I+KPV VHSR
Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60
Query: 205 ARVRKNTECAQE 240
R R+ E ++
Sbjct: 61 FRAREYEEARRK 72
Score = 58.4 bits (135), Expect = 1e-09
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 240 K*RHCGFGKRRGTANARMPQKELWVQRQMVLRKLL 344
K RH G+GKRRGTANARMP+K LW++R VLR LL
Sbjct: 72 KGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLL 106
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 29.1 bits (62), Expect = 0.94
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -1
Query: 278 CTSPLTKATVTSLSCAHSVFLRTRAREWTATGFLMTRPSVIILRMFCLELVLAISLISFG 99
C+ T+A T+ A +V TRA T F T+ + CL+ + ++ G
Sbjct: 532 CSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVN----G 587
Query: 98 SSHTFFLPHRIT-EAASLFCN 39
S+ F P+ ++ A ++ C+
Sbjct: 588 ISYNFECPNGLSFHADTMMCD 608
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 237 LRALC-VFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
+ A C V ++ + + W L++ + +HLT +L I ISD
Sbjct: 1280 VEAKCQVLVDSQKNIPNEWHLENSSKDEHLTSILKMIGISD 1320
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 237 LRALC-VFANTSAGMDSNWFLDDQTIRDHLTDVLSGISISD 118
+ A C V ++ + + W L++ + +HLT +L I ISD
Sbjct: 889 VEAKCQVLVDSQKNIPNEWHLENSSKDEHLTSILKMIGISD 929
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1169 DEQEVRNRMSRLIDGVEVDDFVNLI 1193
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1191 DEQEVRNRMSRLIDGVEVDDFVNLI 1215
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 982 DEQEVRNRMSRLIDGVEVDDFVNLI 1006
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1289 DEQEVRNRMSRLIDGVEVDDFVNLI 1313
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1169 DEQEVRNRMSRLIDGVEVDDFVNLI 1193
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1191 DEQEVRNRMSRLIDGVEVDDFVNLI 1215
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 982 DEQEVRNRMSRLIDGVEVDDFVNLI 1006
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1289 DEQEVRNRMSRLIDGVEVDDFVNLI 1313
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 1000 DEQEVRNRMSRLIDGVEVDDFVNLI 1024
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = -3
Query: 177 DDQTIRDHLTDVLSGISISDFIDLV 103
D+Q +R+ ++ ++ G+ + DF++L+
Sbjct: 960 DEQEVRNRMSRLIDGVEVDDFVNLI 984
>Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical
protein F20E11.7 protein.
Length = 357
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 49 RLAASVMRCGKKKVWLDPNEI 111
++A + + CG K+W DPN I
Sbjct: 171 QIAETSVTCGDDKIWQDPNGI 191
>Z68319-2|CAA92700.2| 446|Caenorhabditis elegans Hypothetical
protein T23G7.2a protein.
Length = 446
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 7 GSHRAMMSSLKLQKRLAA-SVMRCGKKKVWLDPNEINEIA-NTNSRQNIRKMITDGLVI 177
G+ R +++ +++ L +V G+ W D + + E + + Q IRK +DGL+I
Sbjct: 35 GNRRRVIAVFRIECILTLLNVFAYGQLMRWFDDDIVKEKSLDRRKMQTIRKRCSDGLII 93
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 121 ANTNSRQNIRKMITDGLVIKKPVAVHSRARVRKNTE 228
++T+S +N+R ++TD +K V H R ++E
Sbjct: 1055 SDTSSSKNVRILLTDEQSVKSSVRSHPSVSTRDSSE 1090
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 26.6 bits (56), Expect = 5.0
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = -1
Query: 287 SISCTSPLTKATVTSLSCAHSV 222
+++C S +AT+ +++C+HSV
Sbjct: 305 AMTCISAFRRATINAVTCSHSV 326
>Z81056-7|CAB02909.1| 309|Caenorhabditis elegans Hypothetical
protein F09F3.13 protein.
Length = 309
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 186 WFLDDQTIRD--HLTDVLSGISISDFIDLVWIK 94
W I+D HLTD+++ I I + D VW +
Sbjct: 219 WLFVQCVIQDCLHLTDLINSIFIFELSDKVWFR 251
>Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical
protein R07B5.3 protein.
Length = 326
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 179 LMTRPSVIILRMFCLELVLAISLISFGSSHTFFLPHRITEAASLFCNFRELIM 21
L+ PS IL FC L A S++ + +F + LFC+ R LI+
Sbjct: 86 LVRIPSTTILTYFCATLDPAESIVPLLVAVYYFSNYSSQLYTVLFCSTRTLIL 138
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 43 QKRLAASVMRCGKKKVWLDPNEI 111
Q ++A + + CG +W DPN I
Sbjct: 321 QAQIAETSVTCGSDAIWQDPNGI 343
>Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical
protein C08E8.3 protein.
Length = 249
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 290 SSISCTSPLTKATVTSLSCAHSVFLRTRAREWTATGFLMTRPSVIILRMFC 138
SSI +P+ K + +S + + + ++ T T FL +IIL +FC
Sbjct: 55 SSIFNLNPIHKTSTSSFT-SKVLIIKVSINTDTKTSFLEKHTMLIILALFC 104
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 196 HSRARVRKNTECAQESDVTVALVRGEVQLMLECHKK 303
H RA +R+NT+ Q + VA + +++ KK
Sbjct: 58 HHRAEIRRNTDVIQSMEERVARQEEMLTFLVDASKK 93
>AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical
protein M116.4 protein.
Length = 329
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 97 DPNEINEIANTNSRQNIRKMITDGLVIKKPVAVHSRARV 213
DP +I+ IA N R ++ITD L +A + ++++
Sbjct: 185 DPKQIHSIACQNHRSATIRLITDLLAFNDLLAFNPKSQI 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,177,673
Number of Sequences: 27780
Number of extensions: 151551
Number of successful extensions: 460
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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