Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F17
         (209 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    26   0.042
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    19   4.9  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    19   4.9  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    19   4.9  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    19   4.9  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    19   4.9  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    19   4.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   4.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   4.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 26.2 bits (55), Expect = 0.042
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 164 KGSLIATTSAP-LSNRSTEHQATDATNTVNSDFRHDYGKSIFS 39
           K +L+   + P L +R   H + D+ NT+++    DY ++ F+
Sbjct: 522 KNNLMKLETTPVLPSRFQSHPSIDSANTISNSSLQDYDETEFN 564



 Score = 19.4 bits (38), Expect = 4.9
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -1

Query: 89  NTVNSDFRHDYGKSIFSQRSHSTFTL 12
           +T+N    H+Y +S+  + + + F L
Sbjct: 443 STMNKINNHEYKRSVSRESNSNQFIL 468


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 208 SNHTGKGRPCSQDQ*KDH 155
           S+H  + R CS+D+ +++
Sbjct: 228 SSHYSRERSCSRDRNREY 245


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 208 SNHTGKGRPCSQDQ*KDH 155
           S+H  + R CS+D+ +++
Sbjct: 228 SSHYSRERSCSRDRNREY 245


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 208 SNHTGKGRPCSQDQ*KDH 155
           S+H  + R CS+D+ +++
Sbjct: 228 SSHYSRERSCSRDRNREY 245


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 208 SNHTGKGRPCSQDQ*KDH 155
           S+H  + R CS+D+ +++
Sbjct: 228 SSHYSRERSCSRDRNREY 245


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 208 SNHTGKGRPCSQDQ*KDH 155
           S+H  + R CS+D+ +++
Sbjct: 217 SSHYSRERSCSRDRNREY 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 208 SNHTGKGRPCSQDQ*KDH 155
           S+H  + R CS+D+ +++
Sbjct: 228 SSHYSRERSCSRDRNREY 245


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -1

Query: 167 MKGSLIATTSAPLSNRSTEHQATDATNTVNSDFRHDYGKSIF 42
           +K SLI  TSA      ++       N  +S    + GK++F
Sbjct: 291 IKDSLIVLTSALQEMNKSKSITEPPKNCADSGSIWETGKNLF 332


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -1

Query: 113 EHQATDATNTVNSDFRHDYGKSIFSQ-RSHSTFT 15
           +HQ       +NSD +  +G     Q RS S  T
Sbjct: 257 QHQPVTVNRQLNSDVQPGHGSPPVKQHRSSSAST 290


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,509
Number of Sequences: 438
Number of extensions: 901
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)