Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F14
(398 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 197 6e-50
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 167 9e-41
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 163 1e-39
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 155 2e-37
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 138 5e-32
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 132 2e-30
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 126 1e-28
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 120 1e-26
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 113 9e-25
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 113 2e-24
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 106 1e-22
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 105 4e-22
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 99 2e-20
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 96 2e-19
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 94 1e-18
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 91 6e-18
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 90 2e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 86 2e-16
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 86 3e-16
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 85 4e-16
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 85 6e-16
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 80 2e-14
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 79 3e-14
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 79 3e-14
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 78 6e-14
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 76 3e-13
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 73 3e-12
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 72 4e-12
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 71 8e-12
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 70 2e-11
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 69 3e-11
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 66 2e-10
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 64 7e-10
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 58 5e-08
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 57 1e-07
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 54 1e-06
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 52 4e-06
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 49 3e-05
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 48 7e-05
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 47 1e-04
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 47 1e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 2e-04
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 46 2e-04
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 46 3e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 44 8e-04
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 43 0.002
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 42 0.003
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 42 0.006
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 41 0.008
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 41 0.010
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 40 0.014
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 40 0.018
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 40 0.024
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 40 0.024
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 40 0.024
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 39 0.031
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 39 0.031
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 39 0.041
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 38 0.055
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 38 0.055
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.055
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 38 0.072
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 38 0.072
UniRef50_UPI0000D573AC Cluster: PREDICTED: similar to CG14476-PB... 38 0.096
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.096
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 37 0.13
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 37 0.17
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 36 0.22
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.29
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 35 0.67
UniRef50_A4F2N0 Cluster: Mt-collagen alpha I type XVIII; n=1; Mo... 34 0.89
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 34 0.89
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 33 1.6
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 33 1.6
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 33 1.6
UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n... 33 1.6
UniRef50_Q0LJS9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.1
UniRef50_A1TW75 Cluster: O-antigen polymerase; n=1; Acidovorax a... 33 2.1
UniRef50_Q0P3I5 Cluster: Mitochondrion, complete genome; n=1; Os... 33 2.7
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 33 2.7
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 33 2.7
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 32 4.8
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 32 4.8
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 32 4.8
UniRef50_Q8JTH7 Cluster: P53; n=2; Little cherry virus 2|Rep: P5... 31 6.3
UniRef50_A0D4A6 Cluster: Chromosome undetermined scaffold_37, wh... 31 6.3
UniRef50_Q8TQG4 Cluster: Predicted protein; n=1; Methanosarcina ... 31 6.3
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 31 8.3
UniRef50_Q8WTL7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 31 8.3
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 197 bits (481), Expect = 6e-50
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 392 IR 397
IR
Sbjct: 121 IR 122
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 167 bits (405), Expect = 9e-41
Identities = 74/124 (59%), Positives = 101/124 (81%), Gaps = 2/124 (1%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQ--LKVEKW 205
MK I++NQ V IPE++ + +K R V VKGPRG L+R+F H+ V++ ++ ++ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 206 FGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 385
+G++KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 386 KYIR 397
KYIR
Sbjct: 121 KYIR 124
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 163 bits (396), Expect = 1e-39
Identities = 71/122 (58%), Positives = 93/122 (76%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
MK + +N V P+ +T VK+R+V V GPRG LKR+F+HL +++ V QL+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
+KE+AA+RTVCSH++NMIKGVT GF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 392 IR 397
+R
Sbjct: 121 VR 122
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 155 bits (377), Expect = 2e-37
Identities = 70/123 (56%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RQLKVEKWF 208
MK I+A++ ++IPE +TV V +++VTV+GPRG L RNFKHL +D +++ R+L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 209 GSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
G+++ +AA+RT SHV+N+I GVT G++YKMR VYAHFPIN T NT IEIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 389 YIR 397
+R
Sbjct: 121 KVR 123
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 138 bits (333), Expect = 5e-32
Identities = 58/107 (54%), Positives = 80/107 (74%)
Frame = +2
Query: 77 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHV 256
+TV VK R V V GPRG L ++F H +VDI +V ++L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 257 ENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIR 397
ENMI GVT G++YKMR VYAHFPIN T+G ++EIRNF GEK +R
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVR 140
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 132 bits (320), Expect = 2e-30
Identities = 66/124 (53%), Positives = 86/124 (69%), Gaps = 2/124 (1%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
MK I Q++++PE +TV +KSR+V V GPRG L +N KH+ V VN + +KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPI--NCVTTEGNTIIEIRNFLGE 385
+K +AA+RTV S V+NMI GVT G++YKMR VYAHFPI N V +G IE+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 386 KYIR 397
K IR
Sbjct: 121 KKIR 124
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 126 bits (305), Expect = 1e-28
Identities = 59/121 (48%), Positives = 83/121 (68%)
Frame = +2
Query: 35 KQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGS 214
+ I ++ + IP+ +TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGS 61
Query: 215 KKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYI 394
+K A +R+V S + NMI GVT GF+YKMR VYAHFPIN TE T++EIRNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 395 R 397
R
Sbjct: 122 R 122
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 120 bits (288), Expect = 1e-26
Identities = 60/120 (50%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Frame = +2
Query: 32 MKQIVANQKVKIPE---SLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RQLKVE 199
MK I + ++IPE ++ V +KSR + V G G L+R F+H+ VD+++V R++ VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 200 KWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFL 379
WFG K A +RTVCSH+ENMI GV +QYK+R VYAHFPIN T + IEIRNFL
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 113 bits (273), Expect = 9e-25
Identities = 52/113 (46%), Positives = 69/113 (61%)
Frame = +2
Query: 41 IVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKK 220
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDT-ISVAVWFPRGK 61
Query: 221 ELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFL 379
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFM 114
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 113 bits (271), Expect = 2e-24
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 9/124 (7%)
Frame = +2
Query: 53 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPRQ--LKVEKW 205
+ V IPE + + + + + V GPRG L R F+H VDI + P++ + ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 206 FGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 385
+G++++ A VRT+ SH++NMI GVT G+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 386 KYIR 397
K R
Sbjct: 129 KRTR 132
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 106 bits (255), Expect = 1e-22
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 9/131 (6%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 184
MK I+ + V IPE + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 185 QLKVEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIE 364
++ V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +E
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 365 IRNFLGEKYIR 397
I+NFLGEK IR
Sbjct: 121 IKNFLGEKIIR 131
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 105 bits (251), Expect = 4e-22
Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-QLKVEKWF 208
M I +K+KIP+++ + K+R ++ G G + R+F+ + IR + ++ + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 209 GSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ + +EIRNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 389 YIR 397
IR
Sbjct: 121 RIR 123
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 99 bits (238), Expect = 2e-20
Identities = 49/112 (43%), Positives = 75/112 (66%)
Frame = +2
Query: 53 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAA 232
++++IPE + V V+ V VKGP+G L+R K+ V I ++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQI-FTEDGKVVIYKEFPRKKDVAI 67
Query: 233 VRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
VRT +H+ NMIKGVT GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEK 117
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 96.3 bits (229), Expect = 2e-19
Identities = 50/112 (44%), Positives = 72/112 (64%)
Frame = +2
Query: 53 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAA 232
++V+IPE + V V+ V VKGP+G L+R F + I + + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQI-FTEDGNVVIYKDFPRRKDVAI 67
Query: 233 VRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
RT +H+ NMIKGVT GF YK++ VY+HFPI+ V +G+ +I I NFLGEK
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEK 117
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 93.9 bits (223), Expect = 1e-18
Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRQLKVEKWF 208
M+ + + V IPE + VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 209 GSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
+KK+ A V T+ S + NMI GVT G++YK++ VYAHFP++ + IIE NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMSLKVEKDKIIIE--NFLGER 117
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 91.5 bits (217), Expect = 6e-18
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = +2
Query: 128 VLKRNFKHLAVDIRMVNP---RQLKVEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYK 298
V +++ KH+ +D R++ +++K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 299 MRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIR 397
MRAVYAHFPIN + EIRNFLGEK +R
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVR 184
Score = 34.7 bits (76), Expect = 0.67
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRN 142
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 89.8 bits (213), Expect = 2e-17
Identities = 42/119 (35%), Positives = 75/119 (63%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
M+ + ++ IPE++ V ++ ++ V GP+G ++R F H + + VN ++ +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
+++E + T SH++NM++GV N F Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 86.2 bits (204), Expect = 2e-16
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLK--VEKW 205
MK I++NQ V IP ++ + +K R V VKGP+G L R+F H+ V++ ++ + K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 206 FGSKKELAAVRTVCSHVENMIKGVTNG 286
+G++KELA V T+CS V+N IK VT G
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 85.8 bits (203), Expect = 3e-16
Identities = 45/110 (40%), Positives = 69/110 (62%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 238
++IPE ++V + + T KGP+G ++R F + + I V ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIE-VREGEVVVDAESSRKEQKAMVG 67
Query: 239 TVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
T SH++N+I GV+ GF+ KM VYAHFP+ V EG T++ I NFLGEK
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEK 115
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 85.4 bits (202), Expect = 4e-16
Identities = 45/115 (39%), Positives = 73/115 (63%)
Frame = +2
Query: 53 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAA 232
++V+IP + V + ++TV GP+G L R+ + +D+ MV ++ V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 233 VRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIR 397
T+ +H +NMI+GV +G++Y+M+ VY+HFPI + +GN +EI NFLGEK R
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPR 116
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 84.6 bits (200), Expect = 6e-16
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Frame = +2
Query: 17 KQSPNMKQIVANQKVKIPESLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRQL 190
K P M+ I+ + VK+PE T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 191 KVEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIR 370
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 371 NFLGEKYIR 397
NFLGEK ++
Sbjct: 133 NFLGEKNVK 141
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 79.8 bits (188), Expect = 2e-14
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Frame = +2
Query: 35 KQIVANQKVKIPESLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRQLK 193
+ ++ + KIPE++ VKS +VT++ P+ L ++ HL +D N Q+
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 194 VEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRN 373
WFG++K LA + T+ V+NMI GVT G++YKM VY+HFPI +E +
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNG 122
Query: 374 FLGEK 388
F+G K
Sbjct: 123 FMGHK 127
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 79.0 bits (186), Expect = 3e-14
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRQLKVEKW 205
MK ++ + +P+ + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 206 FGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 385
+ +K A VRT+ S + NMI GV+ GF Y ++ VY+HFPI+ + +EI N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 386 KYI 394
K I
Sbjct: 121 KRI 123
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 79.0 bits (186), Expect = 3e-14
Identities = 37/123 (30%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRQLKVEKWF 208
+K ++++IP+ + V +++ ++ VKGP+G + ++F + A IR+ +N ++ +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 209 GSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
+++ A + ++ +H++NMI G NG++Y ++ + HFPI+ V G+ +++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEK 120
Query: 389 YIR 397
IR
Sbjct: 121 NIR 123
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 78.2 bits (184), Expect = 6e-14
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Frame = +2
Query: 38 QIVANQKVKIPESLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRQLKVEK 202
++ + V++PE + + ++ R T+K GP+G R K+ V I V +++V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIE-VGDGKVRVYT 75
Query: 203 WFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLG 382
KK A V T H+EN+I GV GF+Y ++ VYAHFPI V EGN +I I NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIG 133
Query: 383 EKYIR 397
EK+ R
Sbjct: 134 EKHPR 138
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 75.8 bits (178), Expect = 3e-13
Identities = 42/114 (36%), Positives = 64/114 (56%)
Frame = +2
Query: 56 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 235
K+ +PE +T V VTV L R F+H +++R + +L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRD-SSGELEVFVNLPRKKEKALA 68
Query: 236 RTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIR 397
T +H+ NM +GV +GF+YK++AVY+HFP+ + GN + + N GEK R
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEKVPR 120
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 72.5 bits (170), Expect = 3e-12
Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKV 196
M+ + + ++V+IP+ ++V ++ +V VKGP G + + FK+ V + + ++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPV-VMSLQDGKIVM 59
Query: 197 EKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNF 376
E + K+E A + T ++NM GVT G++YK++ +Y HFP+ V +GN ++ I NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENF 117
Query: 377 LGEK 388
LG K
Sbjct: 118 LGRK 121
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 72.1 bits (169), Expect = 4e-12
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2
Query: 218 KELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCV 337
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV 69
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 70.9 bits (166), Expect = 8e-12
Identities = 38/111 (34%), Positives = 63/111 (56%)
Frame = +2
Query: 56 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 235
+++IPE + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 236 RTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
T SH+ENM GVT G++Y M Y+HFP+ V EG+ ++ I NFLGEK
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEK 112
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 69.7 bits (163), Expect = 2e-11
Identities = 37/111 (33%), Positives = 65/111 (58%)
Frame = +2
Query: 56 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 235
+V+IPE +TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 236 RTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
T S + N+ +G+ G+ KM+ V+AHFPI V EG I+ I NF GE+
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGER 119
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 69.3 bits (162), Expect = 3e-11
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Frame = +2
Query: 41 IVANQKVKIPESLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKW 205
IV ++VKI + + + + R VTVKGP+G + + F + V + V ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYL-WVEDDEVVIAAT 75
Query: 206 FGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 385
++++ A + + +++ENM KGVT G +YK++ VY+HFP + + I NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Query: 386 KYIR 397
R
Sbjct: 136 NVPR 139
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 66.1 bits (154), Expect = 2e-10
Identities = 34/110 (30%), Positives = 64/110 (58%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 238
++IP+ + V + ++++ L++ F V + +V ++K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 239 TVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
T S + NM+KG+ GFQY+M+ Y+HFP+ V+ +G T++ I NF GE+
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGER 116
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 64.5 bits (150), Expect = 7e-10
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR--QLKVEKW 205
M+ I NQ VKIPE+ + +V VK RG L+R+F H+ +++R++ R QL+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 206 FGSKKELAAVRTVCSHVENMIKGV 277
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 58.4 bits (135), Expect = 5e-08
Identities = 34/100 (34%), Positives = 58/100 (58%)
Frame = +2
Query: 98 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHVENMIKGV 277
R++ VKG G ++F+ + V IR ++ + ++ K++LA + T S V N+ +GV
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIR-IDGSSVVLKAEGTRKRDLAILNTARSIVRNLCEGV 66
Query: 278 TNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIR 397
G+ K++ VYAHFPI + +G I+ + NF GE+ R
Sbjct: 67 GVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSAR 104
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 56.8 bits (131), Expect = 1e-07
Identities = 33/111 (29%), Positives = 59/111 (53%)
Frame = +2
Query: 56 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 235
++K+P+ + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 236 RTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 388
T S + +I+GVT GF+Y M+ + HFP+ V+ G+ +I + NFLGEK
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEK 116
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 53.6 bits (123), Expect = 1e-06
Identities = 30/116 (25%), Positives = 63/116 (54%)
Frame = +2
Query: 32 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
MK+++ +KV+IPE +V + R++TV+G R R+ H + + V+ +++ ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMD-VHEGHVRL-RYGM 58
Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFL 379
+++ VC +N I G +G++Y +R + F +G T++ ++NFL
Sbjct: 59 AQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFL 113
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 52.0 bits (119), Expect = 4e-06
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-QLKVEKWFGSKK 220
VA VK+P + V + +L++VKGP+G L+ H +V++ +V +L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 221 ELAAVRTVCSHVENMIKGVTNGFQYKMRAV 310
A T + V NM++GV+ GF+ K++ V
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLV 92
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 49.2 bits (112), Expect = 3e-05
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 238
+KIP+++ + VK LV V+G RG L ++ K ++++++ N + V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 239 TVCSHVENMIKGVTNGF 289
S + NM+KGVT GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 48.0 bits (109), Expect = 7e-05
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRQLK----VEKWF 208
+A++ IP+ + + V + + +KG G L N ++L VD R N +K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 209 GSKKELAAVR-TVCSHVENMIKGVTNGFQYKM 301
+K L A+R T SHV NMIKGVT G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 47.2 bits (107), Expect = 1e-04
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRQLKVEKWFGSKK 220
+ N V IP ++ V + ++ +KGP G L + + DI ++ N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKK 68
Query: 221 ELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEI 367
A + NMIKGV+NGF+ K+ + F N + N I+ +
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNL 116
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 47.2 bits (107), Expect = 1e-04
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRQLKVEKWF 208
+A + + +P+ +TV +K +V VKGP+G L + F ++ +++ V P + ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 209 GSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTII 361
+K T S + NM+ GVT G++ ++ V + +GNT++
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIVGIGYR---AQLQGNTLV 111
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 2e-04
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 11/74 (14%)
Frame = +2
Query: 98 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG-----------SKKELAAVRTV 244
+L+ + GPRG+L RNFKH ++DI++ +++K K G K+ V+++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV--QKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSI 110
Query: 245 CSHVENMIKGVTNG 286
+ ++NMI+G+T+G
Sbjct: 111 AAQIKNMIRGITSG 124
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 46.4 bits (105), Expect = 2e-04
Identities = 29/89 (32%), Positives = 46/89 (51%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
V + V+IPE + + + + VTVKGP+G L R H + I + L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKMRAV 310
A T S + NM+ GV+ GF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 248 SHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYI 394
+H+++ + GF Y+MR+VYA FP N + E ++IE + +G+KYI
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYI 69
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 44.4 bits (100), Expect = 8e-04
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 59 VKIPESLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 235
+ IP+ + V V +VTVKG +G L++ F + V+I V ++ V + K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIE-VRDGEVVVTRKGDDKEERAMH 66
Query: 236 RTVCSHVENMIKGVTNGFQYKMRAV 310
T + + NM+KGVT GF+ + V
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIV 91
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 43.2 bits (97), Expect = 0.002
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKK 220
V + ++IP +TV + + V VKGP+G L R F H ++I+ V L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 221 ELAAVRTVCSHVENMIKGVTNGFQYKMRAV 310
A T S + NM++GV+ GF+ + V
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELV 91
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 42.3 bits (95), Expect = 0.003
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKK 220
V N+ +++P ++ V +K R ++V+GP+G L+ F H + + N ++ K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 221 ELAAVR-TVCSHVENMIKGVTNGFQYKMRAV 310
+ + T + + NM++GV+ GFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 41.5 bits (93), Expect = 0.006
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
VA +KIP + V+V + +TVKG G L R H AV + + +L+ S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTD-AELQTICANDSPGS 62
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
A T + + NM++GV GFQ K+
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKL 88
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 41.1 bits (92), Expect = 0.008
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ N+ + +P + + +VTVKGP+G L R F ++IR V ++ + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 224 LAAVRTVCSHVENMIKGVTNGF--QYKMRAV 310
T + + NM+ GV+ GF + +MR V
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 40.7 bits (91), Expect = 0.010
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 32 MKQIVANQKVK-IPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWF 208
M+QI + + IP + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 209 GSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAV 310
+ A + T CS + +MI GVT GF K++ +
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 40.3 bits (90), Expect = 0.014
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + IP+ ++V + VTVKGP+G LKR V + V+ V K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVD--NTIVVAPTSEKRQ 60
Query: 224 LAAVRTVC-SHVENMIKGVTNGFQYKMRAV 310
+C + V NMI+GV+ G+ K+ V
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 39.9 bits (89), Expect = 0.018
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRQLKVEKWFGSKK 220
V + IPE + V + V + GP+G L + FK ++A+ ++ +L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 221 ELAAVRTVCSHVENMIKGVTNGFQYKM 301
A T S + NMI GV GF+ K+
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKL 87
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 39.5 bits (88), Expect = 0.024
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
V + + +P+ + +++K+ LV +KG GVL N L + I + N ++K + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPL-IAIEVEN-HEVKTIRANEEKHT 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
T S +ENMI GV+ GF+ ++
Sbjct: 62 KQLHGTTNSIIENMIIGVSKGFKKEL 87
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 39.5 bits (88), Expect = 0.024
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + + +P+++T+ + + VTVKGP+G L R F ++ +V + V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 224 LAAVRTVC-SHVENMIKGVTNGFQYKM 301
+C + + NM++GV+ GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 39.5 bits (88), Expect = 0.024
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +2
Query: 44 VANQKVKIPESLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRQLKVEKWFGS 214
+ + + PE++ V K VTV+GP+G L+ N H + + + R +K+++
Sbjct: 4 LVKKPIPYPENVKVSYDEKEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDR 62
Query: 215 KKELAAVRTVCSHVENMIKGVTNGF 289
A T+ + ++NMIKGVT GF
Sbjct: 63 SFHKAIHGTMAALIKNMIKGVTEGF 87
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 39.1 bits (87), Expect = 0.031
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRQLKVEKWFGSKKELA 229
+ IP +TV +K +VTVKGP+G L + ++A++ V + + E K++ A
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQYVNPAINVAIEDGHVTLTENEKEMIDNPKQKHA 68
Query: 230 AVRTVCSHVENMIKGVTNGFQYKMRAV 310
S V NM+ GV+ G++ ++ V
Sbjct: 69 FHGLYRSLVHNMVVGVSEGYKKELELV 95
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 39.1 bits (87), Expect = 0.031
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 44 VANQKVKIPESLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRQLKVEKWFGS 214
+A + + PE++ V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 215 KKELAAVRTVCSHVENMIKGVTNGF 289
A T+ + V+NMIKGVT GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 38.7 bits (86), Expect = 0.041
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + + +P + + + + + VKGP+G L R+ L + ++ N + L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 224 LAAVRTVC-SHVENMIKGVTNGFQYKMRAV 310
+ +C + V NM+ GV+ GF+ ++ V
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELV 90
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 38.3 bits (85), Expect = 0.055
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
V + ++IP V + VKG G L R F V+I+ N Q+ VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHEN-NQISVERLNELKPT 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKMR 304
T + + NM+KGV+ GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 38.3 bits (85), Expect = 0.055
Identities = 23/84 (27%), Positives = 47/84 (55%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 238
+++P+S+TV + +TVKGP+G L R F + N ++ + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 239 TVCSHVENMIKGVTNGFQYKMRAV 310
T +++ +MI+GV NG++ ++ +
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLI 88
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.055
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ +K+P + V + VTVKGP+G L R+F+ ++ + V G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR---PEVTINREGDYLVVAPVGTDKA 60
Query: 224 LAAVRTVC-SHVENMIKGVTNGFQYKMRAV 310
+ + + ++NMI GV +GF + V
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIV 90
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 37.9 bits (84), Expect = 0.072
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + IP+ + V + VTVKGP+G LKR V + V+ + V +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVD-NSIVVAP-TSTKRS 60
Query: 224 LAAVRTVC-SHVENMIKGVTNGFQYKMRAV 310
+C + V NM+ GV+ G+ K+ V
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIV 90
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 37.9 bits (84), Expect = 0.072
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ Q + +P +TV+ + + VKGP+G L + + + +R + QL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQ-DGDQLLVERPSDAQKH 61
Query: 224 LAAVRTVCSHVENMIKGVTNGF 289
A + V N +KGV++G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_UPI0000D573AC Cluster: PREDICTED: similar to CG14476-PB,
isoform B; n=2; Tribolium castaneum|Rep: PREDICTED:
similar to CG14476-PB, isoform B - Tribolium castaneum
Length = 950
Score = 37.5 bits (83), Expect = 0.096
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = -3
Query: 291 WNPLVTPLIMFST*EHTVLTAASSFLEPNHFSTFNWRGLTMRMSTAKCLKFRFRTPRGPF 112
WN + P + ++ E T+ + F +H N GL MST + L R PF
Sbjct: 547 WNDMNEPSVFDNSIEKTLPGDSLHFGNVSHRDIHNIYGLLHTMSTHQGLLDRDNGTTRPF 606
Query: 111 TVTKRDFTWTVRLSGIFT 58
+T+ F T R SGI+T
Sbjct: 607 ILTRAHFAGTQRYSGIWT 624
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 37.5 bits (83), Expect = 0.096
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRQLKVEKWFGSKKELAAV 235
+++PE +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 236 RTVCSHVENMIKGVTNGFQYKMRAV 310
T +++ +MI+GVT+G+ K+ V
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTLV 88
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 37.1 bits (82), Expect = 0.13
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + + +P +L+ + +TV GP+G L R +++ ++N K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILN--DTIAVKTSGQTKM 60
Query: 224 LAAVRTVC-SHVENMIKGVTNGFQYKMR 304
+ + + + + NMI+GV+NGF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 36.7 bits (81), Expect = 0.17
Identities = 20/86 (23%), Positives = 44/86 (51%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ Q + +P ++T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
+ +NM+ GV+ GF+ K+
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKL 130
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 36.3 bits (80), Expect = 0.22
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ +++ + V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
A V NM++GVT GF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 35.9 bits (79), Expect = 0.29
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRQLKVEKWFGSKK 220
VA + IPE++ + + +V VKG +G L +++D V + + ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 221 ELAAVRTVCSHVENMIKGVTNGFQYKMRAV 310
+A T S + NM+ GV+ GF+ K+ +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELI 90
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 34.7 bits (76), Expect = 0.67
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
V VKIPE + V V +V V+GP+G K +F + V+ ++KV + S
Sbjct: 4 VGKMPVKIPEKVKVSVDGNVVKVEGPKG--KMHFPTNPLVSVQVDKGEVKVARQDESHVA 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQ 292
+ V+N ++GV G++
Sbjct: 62 KGLHGLTRTLVKNALEGVVKGYE 84
>UniRef50_A4F2N0 Cluster: Mt-collagen alpha I type XVIII; n=1;
Molgula tectiformis|Rep: Mt-collagen alpha I type XVIII
- Molgula tectiformis
Length = 1102
Score = 34.3 bits (75), Expect = 0.89
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Frame = +2
Query: 20 QSPNMKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVE 199
Q +M ++V + V++ + +T HV S + V+GP G F + +P +
Sbjct: 21 QDADMSKVVRDSDVELTKLVTTHVGSEIKYVRGPNGGAAFQF------TKGGSPNGNLIS 74
Query: 200 KWFGSKK---ELAAVRTVCSH--VENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIE 364
+ FG +K E AA+ ++ ++ + +TN +Q AV A I+ +T G T I
Sbjct: 75 QVFGDRKTLGEFAAIMSIKPERDLDGYLFALTNSYQ---NAVLAGVKISPSSTSGFTDIS 131
Query: 365 I 367
+
Sbjct: 132 L 132
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 34.3 bits (75), Expect = 0.89
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + V IP + V + + VTVKGP+G L V+++ L + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKMRAV 310
+ V NM+ GVT GF+ + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELV 90
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 33.5 bits (73), Expect = 1.6
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ N+ + I + V + + V+VKGP+G LK + ++ V + S+
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
A S + NMI GV+ G++ ++
Sbjct: 64 KAEHGLNRSLISNMIVGVSTGWKKEL 89
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 33.5 bits (73), Expect = 1.6
Identities = 18/84 (21%), Positives = 40/84 (47%)
Frame = +2
Query: 50 NQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELA 229
++K++IP+++ + +K + ++GP G + N H N L +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 230 AVRTVCSHVENMIKGVTNGFQYKM 301
+ S ++ IKG+ GF+ +
Sbjct: 90 FLNLYKSLIKLKIKGILQGFKLNL 113
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 33.5 bits (73), Expect = 1.6
Identities = 21/86 (24%), Positives = 43/86 (50%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + V +P+ +T +V ++VT KGP+G LK F + + + V+ SK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK--FVVNDDVLVKLEDGAIAVDPRNESKMA 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
+ + + N++ GV +GF+ ++
Sbjct: 62 RSKWGMSRTQIANILTGVKDGFEKRL 87
>UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n=2;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L6 -
Emiliania huxleyi
Length = 181
Score = 33.5 bits (73), Expect = 1.6
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ Q + IP+ + + ++ + V V GP+G L R +++ +EK +K
Sbjct: 4 IGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLS 63
Query: 224 LAAVRTVCSHVENMIKGVTNGFQYKM 301
A + + NM+ GV++G+ K+
Sbjct: 64 QALYGLSRTLLSNMVTGVSSGWHKKL 89
>UniRef50_Q0LJS9 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 154
Score = 33.1 bits (72), Expect = 2.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -3
Query: 327 IGK*AYTARILYWNPLVTPLIMFST*EHTVLTAASSFLEPNHFSTFNWRGLTMRM 163
+G +Y + N L L FS +H ++ +F EPNHF TF R ++ +M
Sbjct: 16 VGIDSYPHPVPVTNALRCLLFGFSQQDHPLVIHPLTFAEPNHFGTFTQRWMSPQM 70
>UniRef50_A1TW75 Cluster: O-antigen polymerase; n=1; Acidovorax
avenae subsp. citrulli AAC00-1|Rep: O-antigen polymerase
- Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 556
Score = 33.1 bits (72), Expect = 2.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 78 RLSGIFTFWFATICFILGLCLTQA 7
RL GI +FW A IC I G+ L+Q+
Sbjct: 182 RLIGISSFWLAVICLIFGMVLSQS 205
>UniRef50_Q0P3I5 Cluster: Mitochondrion, complete genome; n=1;
Ostreococcus tauri|Rep: Mitochondrion, complete genome -
Ostreococcus tauri
Length = 187
Score = 32.7 bits (71), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 32 MKQI-VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKH 151
MK I + Q V +P ++TVHV + +GP G + N H
Sbjct: 1 MKSISITKQSVVVPSTITVHVADSTLRFEGPLGKISVNLAH 41
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWF--GSK 217
+ ++++KIP+++++ + + V+G G L+ ++ + ++ + Q + G+K
Sbjct: 4 IGSKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTK 63
Query: 218 KELAAV----RTVCSHVENMIKGVTNGFQYKMRAV 310
K+ A T + +ENM+ GV+ G+ + V
Sbjct: 64 KQKTASYIMWGTYRTLIENMLIGVSKGYSKTIELV 98
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 32.7 bits (71), Expect = 2.7
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +2
Query: 59 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG--SKKELAA 232
+ IP + V + R V VKGP+G L +V++ + R L + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 233 VRTVCSHVENMIKGVTNGFQYKMR 304
RT+ V NM+ GVT GF M+
Sbjct: 68 GRTL---VANMVTGVTTGFTKPMQ 88
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 31.9 bits (69), Expect = 4.8
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +2
Query: 140 NFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAH 319
+F LAVD ++N + +K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 320 FPINCVTTEGNTIIE 364
NC+ TI+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 31.9 bits (69), Expect = 4.8
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+A + + + V V + +T+KG +G L R AV +++ + + G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 224 LAAVRTVCSHVENMIKGVTNGFQ 292
A T ++V NM+ GVT GF+
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFK 84
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 31.9 bits (69), Expect = 4.8
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 44 VANQKVKI-PESLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRQLKVEKWFGSK 217
+ N+ +KI P +++ + L+T+KGP G K+L + + N +KV K
Sbjct: 4 IGNRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDT-IKVTNNNNLK 62
Query: 218 KELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPIN 331
+ T + V N + GVT GF+ K+ V + N
Sbjct: 63 QTKILHGTFNALVNNAVIGVTKGFEKKLILVGVGYRAN 100
>UniRef50_Q8JTH7 Cluster: P53; n=2; Little cherry virus 2|Rep: P53 -
Little cherry virus 2
Length = 461
Score = 31.5 bits (68), Expect = 6.3
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 167 RMVNPRQLKVEKWFGSKK---ELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCV 337
R+V PR+ K E FGS K +++ V VC+ +N+ K F + N V
Sbjct: 353 RIVRPRE-KFEVNFGSTKYLCDISPVLEVCTRFDNIYKNTFRRFMGSFALLARKISKNRV 411
Query: 338 TTEGNTI 358
T GN I
Sbjct: 412 LTSGNMI 418
>UniRef50_A0D4A6 Cluster: Chromosome undetermined scaffold_37, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_37,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 804
Score = 31.5 bits (68), Expect = 6.3
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 89 VKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHVENMI 268
VKS ++ + +K N + + ++ + NP+ +K+E K + R+ MI
Sbjct: 652 VKSDIIYNESMSDSVKSNTQQINLNNKGANPQSIKLETMLLFDKMMKRNRSKKKIATIMI 711
Query: 269 K-GVTNGFQYKMRAVYAHFPINCVTTEGNTIIEI 367
+ G+ N FQ + ++ +F +N +TT+G +I +
Sbjct: 712 EHGLLNQFQ-EFMDLHRNFNLNGLTTDGIPLISL 744
>UniRef50_Q8TQG4 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 597
Score = 31.5 bits (68), Expect = 6.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 5 EACVKQSPNMKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 166
E ++ S ++ +I+ + +IPE KS+L +K G+LK K +VD+
Sbjct: 501 EKIIQNSSSITEII--EAAEIPEKEKAEAKSKLADLKKIPGILKEKAKSFSVDV 552
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 31.1 bits (67), Expect = 8.3
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 44 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 223
+ + + IP +T ++ + + VKGP+G L R + + + +K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 224 LAAV-RTVCSHVENMIKGVTNGFQYKM 301
L + RT+ V NM+ GV+ GF+ ++
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRL 87
>UniRef50_Q8WTL7 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 2460
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +2
Query: 149 HLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVC---SHVENMIKGVT--NGFQYKMRAVY 313
H+ D++++ ++ ++ WF ++L ++RT C S ++ I +T GF + M+A +
Sbjct: 361 HVKHDVKIILTKETCMDIWFMRGEQLESIRTRCGPLSSLDMSILWITTEKGFYWNMKAEF 420
Query: 314 AHF 322
+F
Sbjct: 421 LNF 423
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 31.1 bits (67), Expect = 8.3
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 281 NGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
+G +YK +YA + + +T +GN++ E+ FLG+KY
Sbjct: 85 DGSRYKTTVIYAPYLL-LITRDGNSL-EVAKFLGKKY 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,720,603
Number of Sequences: 1657284
Number of extensions: 7535071
Number of successful extensions: 19284
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 18847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19230
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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