Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F14
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022718-1|AAY55134.1|  190|Drosophila melanogaster RE74350p pro...   197   4e-51
AE014134-2010|AAF53049.1|  190|Drosophila melanogaster CG6141-PB...   197   4e-51
AE014134-2009|AAF53048.2|  190|Drosophila melanogaster CG6141-PA...   197   4e-51
X94613-1|CAA64319.1|  190|Drosophila melanogaster ribosomal prot...   197   5e-51
BT003787-1|AAO41470.1|  854|Drosophila melanogaster LD20919p pro...    30   0.99 
AE014297-957|AAF54391.1|  854|Drosophila melanogaster CG8165-PA ...    30   0.99 
AY060683-1|AAL28231.1|  284|Drosophila melanogaster GH12395p pro...    29   3.0  
AE014297-2850|AAN14364.1|  284|Drosophila melanogaster CG31200-P...    29   3.0  
U65589-1|AAC47273.1|  694|Drosophila melanogaster Dfz2 protein.        28   4.0  
BT022574-1|AAY54990.1|  190|Drosophila melanogaster IP06655p pro...    28   4.0  
BT022549-1|AAY54965.1|  109|Drosophila melanogaster IP06555p pro...    28   4.0  
AE013599-3542|AAF46955.2|  190|Drosophila melanogaster CG13538-P...    28   4.0  
BT004835-1|AAO45191.1|  241|Drosophila melanogaster RH48327p pro...    28   5.3  
AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p pro...    27   7.0  
AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA...    27   7.0  
X70838-1|CAA50186.1|  224|Drosophila melanogaster TBP-related fa...    27   9.2  
X70837-1|CAA50185.1|  224|Drosophila melanogaster TBP-related fa...    27   9.2  
AY128483-1|AAM75076.1|  224|Drosophila melanogaster RE61442p pro...    27   9.2  
AE014134-1392|AAF52600.1|  224|Drosophila melanogaster CG7562-PA...    27   9.2  

>BT022718-1|AAY55134.1|  190|Drosophila melanogaster RE74350p
           protein.
          Length = 190

 Score =  197 bits (481), Expect = 4e-51
 Identities = 91/122 (74%), Positives = 106/122 (86%)
 Frame = +2

Query: 32  MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
           M+ I +NQ VKIP+ +   VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1   MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60

Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
           +KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61  TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120

Query: 392 IR 397
           IR
Sbjct: 121 IR 122


>AE014134-2010|AAF53049.1|  190|Drosophila melanogaster CG6141-PB,
           isoform B protein.
          Length = 190

 Score =  197 bits (481), Expect = 4e-51
 Identities = 91/122 (74%), Positives = 106/122 (86%)
 Frame = +2

Query: 32  MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
           M+ I +NQ VKIP+ +   VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1   MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60

Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
           +KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61  TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120

Query: 392 IR 397
           IR
Sbjct: 121 IR 122


>AE014134-2009|AAF53048.2|  190|Drosophila melanogaster CG6141-PA,
           isoform A protein.
          Length = 190

 Score =  197 bits (481), Expect = 4e-51
 Identities = 91/122 (74%), Positives = 106/122 (86%)
 Frame = +2

Query: 32  MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
           M+ I +NQ VKIP+ +   VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1   MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60

Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
           +KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61  TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120

Query: 392 IR 397
           IR
Sbjct: 121 IR 122


>X94613-1|CAA64319.1|  190|Drosophila melanogaster ribosomal protein
           L9 protein.
          Length = 190

 Score =  197 bits (480), Expect = 5e-51
 Identities = 91/122 (74%), Positives = 105/122 (86%)
 Frame = +2

Query: 32  MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 211
           M+ I +NQ VKIP+ +   VK+R+VT+ G RG LKR FKHLA+D+ M + R LKVEKWFG
Sbjct: 1   MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRTLKVEKWFG 60

Query: 212 SKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 391
           +KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61  TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120

Query: 392 IR 397
           IR
Sbjct: 121 IR 122


>BT003787-1|AAO41470.1|  854|Drosophila melanogaster LD20919p
           protein.
          Length = 854

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 376 EVTDLNNCVSLSGDTVDREMSVHCTHLVLE 287
           +V +L+NC+ ++ D V  E   HC HL  E
Sbjct: 775 QVQNLHNCIKVAEDFVSPENITHCYHLTHE 804


>AE014297-957|AAF54391.1|  854|Drosophila melanogaster CG8165-PA
           protein.
          Length = 854

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 376 EVTDLNNCVSLSGDTVDREMSVHCTHLVLE 287
           +V +L+NC+ ++ D V  E   HC HL  E
Sbjct: 775 QVQNLHNCIKVAEDFVSPENITHCYHLTHE 804


>AY060683-1|AAL28231.1|  284|Drosophila melanogaster GH12395p
           protein.
          Length = 284

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 291 WNPLVTPLIMFST*EHTVLTAAS-SFLEPNHFSTFNWRGLTMRMSTAKC 148
           W   V P+ +  T E   LT  +  +   NH ++   +GL M +ST KC
Sbjct: 157 WTNWVQPICLEGTSEPETLTNRNLHYTGFNHMASEKGKGLAMTVSTQKC 205


>AE014297-2850|AAN14364.1|  284|Drosophila melanogaster CG31200-PA
           protein.
          Length = 284

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 291 WNPLVTPLIMFST*EHTVLTAAS-SFLEPNHFSTFNWRGLTMRMSTAKC 148
           W   V P+ +  T E   LT  +  +   NH ++   +GL M +ST KC
Sbjct: 157 WTNWVQPICLEGTSEPETLTNRNLHYTGFNHMASEKGKGLAMTVSTQKC 205


>U65589-1|AAC47273.1|  694|Drosophila melanogaster Dfz2 protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 117 VLAEF*NETSNTW--LLTFAWLILAS*KWRNGSVLK 218
           +L  F    S+ W  +LTF W + A  KW N ++ K
Sbjct: 400 LLTYFFGMASSIWWVILTFTWFLAAGLKWGNEAITK 435


>BT022574-1|AAY54990.1|  190|Drosophila melanogaster IP06655p
           protein.
          Length = 190

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 65  IPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEK-WFGSKKEL 226
           +PESLT   ++RL+  K P  + K N ++ +  +    P      K W    + L
Sbjct: 27  VPESLTKKYRNRLIIPKDPYSIFKLNSRNSSYLLAFRFPEMRNCRKLWMSDLRNL 81


>BT022549-1|AAY54965.1|  109|Drosophila melanogaster IP06555p
           protein.
          Length = 109

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 65  IPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEK-WFGSKKEL 226
           +PESLT   ++RL+  K P  + K N ++ +  +    P      K W    + L
Sbjct: 28  VPESLTKKYRNRLIIPKDPYSIFKLNSRNSSYLLAFRFPEMRNCRKLWMSDLRNL 82


>AE013599-3542|AAF46955.2|  190|Drosophila melanogaster CG13538-PA
           protein.
          Length = 190

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 65  IPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEK-WFGSKKEL 226
           +PESLT   ++RL+  K P  + K N ++ +  +    P      K W    + L
Sbjct: 27  VPESLTKKYRNRLIIPKDPYSIFKLNSRNSSYLLAFRFPEMRNCRKLWMSDLRNL 81


>BT004835-1|AAO45191.1|  241|Drosophila melanogaster RH48327p
           protein.
          Length = 241

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 80  TVHVKSRLVTVKGPRGVLKRNFKHLAVDI 166
           TVH+K R +T K  R   K NFK L + I
Sbjct: 4   TVHLKDRTITEKLVRRAEKANFKALVLTI 32


>AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p
           protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 185 QLKVEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHF 322
           +LKVEKW GS  E+ A        + + +G    F + + + YA F
Sbjct: 165 KLKVEKWLGSLNEMQA-------SDELSEGQVRQFLFDLESAYADF 203


>AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA
           protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 185 QLKVEKWFGSKKELAAVRTVCSHVENMIKGVTNGFQYKMRAVYAHF 322
           +LKVEKW GS  E+ A        + + +G    F + + + YA F
Sbjct: 165 KLKVEKWLGSLNEMQA-------SDELSEGQVRQFLFDLESAYADF 203


>X70838-1|CAA50186.1|  224|Drosophila melanogaster TBP-related
           factor protein.
          Length = 224

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 237 LTAASSFLEPNHFSTFNWRGLTMRMSTAKCLKFRFRT 127
           L A +S    + +S   +RG+ MRM + +C    FRT
Sbjct: 66  LKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRT 102


>X70837-1|CAA50185.1|  224|Drosophila melanogaster TBP-related
           factor protein.
          Length = 224

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 237 LTAASSFLEPNHFSTFNWRGLTMRMSTAKCLKFRFRT 127
           L A +S    + +S   +RG+ MRM + +C    FRT
Sbjct: 66  LKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRT 102


>AY128483-1|AAM75076.1|  224|Drosophila melanogaster RE61442p
           protein.
          Length = 224

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 237 LTAASSFLEPNHFSTFNWRGLTMRMSTAKCLKFRFRT 127
           L A +S    + +S   +RG+ MRM + +C    FRT
Sbjct: 66  LKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRT 102


>AE014134-1392|AAF52600.1|  224|Drosophila melanogaster CG7562-PA
           protein.
          Length = 224

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 237 LTAASSFLEPNHFSTFNWRGLTMRMSTAKCLKFRFRT 127
           L A +S    + +S   +RG+ MRM + +C    FRT
Sbjct: 66  LKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRT 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,171,802
Number of Sequences: 53049
Number of extensions: 360475
Number of successful extensions: 578
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)