Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F13
(389 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 205 2e-52
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 198 4e-50
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 192 2e-48
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 160 1e-38
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 159 1e-38
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 154 7e-37
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 152 2e-36
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 137 8e-32
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 130 1e-29
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 117 9e-26
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 110 1e-23
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 104 5e-22
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 103 1e-21
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 98 5e-20
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 96 2e-19
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 64 9e-10
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 64 1e-09
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 62 3e-09
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 58 6e-08
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 58 8e-08
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 57 1e-07
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 57 1e-07
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 55 6e-07
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 53 2e-06
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 52 3e-06
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 51 7e-06
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 51 7e-06
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 50 1e-05
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 50 1e-05
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 50 2e-05
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 48 9e-05
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 47 1e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 47 1e-04
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 44 8e-04
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 44 0.001
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 41 0.007
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 37 0.16
UniRef50_Q4RQ03 Cluster: Chromosome 17 SCAF15006, whole genome s... 33 1.5
UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma j... 33 1.5
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 33 1.5
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 33 2.0
UniRef50_A1DCZ8 Cluster: C6 zinc finger domain protein; n=2; Tri... 32 3.4
UniRef50_UPI0001552B57 Cluster: PREDICTED: hypothetical protein;... 32 4.5
UniRef50_Q9LZ98 Cluster: Non-intrinsic ABC protein 9; n=8; Magno... 32 4.5
UniRef50_Q8IP19 Cluster: CG4952-PB, isoform B; n=15; Eumetazoa|R... 31 6.0
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 31 7.9
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 205 bits (501), Expect = 2e-52
Identities = 93/126 (73%), Positives = 107/126 (84%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MKLNV + FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
FPMKQ VLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 371 IPGLTD 388
IPGLTD
Sbjct: 121 IPGLTD 126
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 198 bits (482), Expect = 4e-50
Identities = 93/126 (73%), Positives = 104/126 (82%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MKLN+ + EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
FPMKQ VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 371 IPGLTD 388
IPGLTD
Sbjct: 121 IPGLTD 126
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 192 bits (469), Expect = 2e-48
Identities = 87/126 (69%), Positives = 101/126 (80%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MKLN+ + E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
FPMKQ ++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q+
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQD 120
Query: 371 IPGLTD 388
IPGLTD
Sbjct: 121 IPGLTD 126
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 160 bits (388), Expect = 1e-38
Identities = 74/126 (58%), Positives = 93/126 (73%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MK N+ + E+ D+ K IF++KRMG V+AD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
FPM+Q VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA E
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANE 120
Query: 371 IPGLTD 388
I GLTD
Sbjct: 121 IAGLTD 126
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 159 bits (387), Expect = 1e-38
Identities = 76/129 (58%), Positives = 92/129 (71%)
Frame = +2
Query: 2 IAVMKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 181
I MKLN+ +V+ E+ DE KL F EKR+G V D +G+E+ GYV R+ GGND
Sbjct: 39 IQKMKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGND 98
Query: 182 KQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 361
KQGFPM Q VLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG
Sbjct: 99 KQGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKG 158
Query: 362 AQEIPGLTD 388
EIPGLTD
Sbjct: 159 TNEIPGLTD 167
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 154 bits (373), Expect = 7e-37
Identities = 72/125 (57%), Positives = 89/125 (71%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MK N+ + E+ D+ K IF +K+MG EV+ D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
FPMKQ V+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG E
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAE 120
Query: 371 IPGLT 385
I GLT
Sbjct: 121 IDGLT 125
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 152 bits (369), Expect = 2e-36
Identities = 74/116 (63%), Positives = 89/116 (76%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MKLNV + FEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 358
FPMKQ VLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 115
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 137 bits (331), Expect = 8e-32
Identities = 60/125 (48%), Positives = 87/125 (69%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
M++ + + + ++ D L YEKR+G +++ + LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
FPMKQ V+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +E
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKE 120
Query: 371 IPGLT 385
I GLT
Sbjct: 121 IDGLT 125
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 130 bits (313), Expect = 1e-29
Identities = 59/111 (53%), Positives = 81/111 (72%)
Frame = +2
Query: 56 FEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRL 235
F+ +E R F +KR+G EVDA LGDE+KGY+L++ GG DK GFPM V TN+RVRL
Sbjct: 15 FDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNNRVRL 74
Query: 236 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 388
L+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+
Sbjct: 75 LLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTN 125
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 117 bits (281), Expect = 9e-26
Identities = 56/125 (44%), Positives = 76/125 (60%)
Frame = +2
Query: 14 KLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 193
K+N+ + D K + + RM +E D LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 194 PMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 373
PM Q VL + R RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTL 127
Query: 374 PGLTD 388
PGLTD
Sbjct: 128 PGLTD 132
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 110 bits (264), Expect = 1e-23
Identities = 53/111 (47%), Positives = 78/111 (70%)
Frame = +2
Query: 56 FEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRL 235
FE+ +++R+ Y+K++G + D +LG+E++G ++ + GG+D QGFPM LT RVR
Sbjct: 2 FEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRP 60
Query: 236 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 388
L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+
Sbjct: 61 LLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTN 111
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 104 bits (250), Expect = 5e-22
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MK N+ V+ E+ DE KLRI Y K++ +++D ++G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 191 FPMKQXVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVIV 352
FPMK+ +L+ SRV++L+ KG + R + GER RKSVRGCIV +SVL + ++
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLL 116
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 103 bits (247), Expect = 1e-21
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 3/129 (2%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRI-FYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQ 187
MKLN+ + FE+ DE R+ + R+G EVD + G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 188 GFPMKQXVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKG 361
GFPM VL +SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 362 AQEIPGLTD 388
Q I G+TD
Sbjct: 121 DQPIEGVTD 129
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 98.3 bits (234), Expect = 5e-20
Identities = 44/77 (57%), Positives = 55/77 (71%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 190
MKLN+ + E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 191 FPMKQXVLTNSRVRLLM 241
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 95.9 bits (228), Expect = 2e-19
Identities = 48/76 (63%), Positives = 55/76 (72%)
Frame = +2
Query: 161 RVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 340
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 341 LVIVRKGAQEIPGLTD 388
L +V+KGA EI GLTD
Sbjct: 116 LQVVKKGANEIAGLTD 131
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 64.1 bits (149), Expect = 9e-10
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 101 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDG 280
++G E + +LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 281 ERKRKSVRGCIVDANLSVLALVIVRKGAQEI 373
R+RK+VRG + ++S + + + +G Q +
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSERGEQTL 117
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 63.7 bits (148), Expect = 1e-09
Identities = 35/105 (33%), Positives = 59/105 (56%)
Frame = +2
Query: 47 RSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSR 226
R+Y +VV+ K++G + ++ D Y L++ GG D+ GFPM+ + +R
Sbjct: 14 RAYQKVVEGANANRLIGKQIGDVISGTIV-DLPPDYELKITGGTDRDGFPMRPDLPGTAR 72
Query: 227 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 361
RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 73 RRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 62.5 bits (145), Expect = 3e-09
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 65 VDEHKLRIFYEKRMGAEVDADLLGDEW-KGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLM 241
++ R F KR+G V A +LG E KG L + GG+D+ GFPM+ + + R L+
Sbjct: 139 IEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPVKKRALL 198
Query: 242 SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 358
S G + PR GER+RK+VRG + ++ + IV++
Sbjct: 199 S-GPPGFWPREKGERRRKTVRGNTISEDIVQINTKIVKQ 236
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 58.0 bits (134), Expect = 6e-08
Identities = 36/112 (32%), Positives = 59/112 (52%)
Frame = +2
Query: 47 RSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSR 226
R+Y VD F + +GA VD +G + GY + + GG+D G PM++ V +
Sbjct: 15 RTYQFEVDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDL 72
Query: 227 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL 382
+ +L+ +G + + P DGERKR +VRG V ++ L + I G + + L
Sbjct: 73 MEVLL-EGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGEEPVAEL 123
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 57.6 bits (133), Expect = 8e-08
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +2
Query: 158 LRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 337
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+ +
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQV 119
Query: 338 ALVIV 352
+ IV
Sbjct: 120 NMKIV 124
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 125 DLLGDEWKGYV-LRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSV 301
+L G E+ V L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+V
Sbjct: 49 ELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTV 107
Query: 302 RG 307
RG
Sbjct: 108 RG 109
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 56.8 bits (131), Expect = 1e-07
Identities = 27/94 (28%), Positives = 56/94 (59%)
Frame = +2
Query: 98 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRD 277
K++G E+ ++ E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 278 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPG 379
G R+RKS+RG + +++++ +V G+ + G
Sbjct: 85 GLRRRKSLRGNTISKDITLINTKVVEYGSAPLGG 118
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 54.8 bits (126), Expect = 6e-07
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = +2
Query: 11 MKLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWK 148
MKLN+ + EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 53.2 bits (122), Expect = 2e-06
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 101 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDG 280
++G D L+G GY L + GG+D GFPM + + R+L+S G + PR G
Sbjct: 132 KIGDTFDGGLVG--LPGYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKG 188
Query: 281 ERKRKSVRGCIVDANLSVLALVIV 352
ER+RK+VRG + ++ + VIV
Sbjct: 189 ERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 52.4 bits (120), Expect = 3e-06
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +2
Query: 65 VDEHKLRIFYEKRMGAEVDAD-LLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLM 241
VD++K ++G +A+ L+G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 242 SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 355
S G + P +GER+RK++RG + + + +IVR
Sbjct: 178 S-GPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 51.2 bits (117), Expect = 7e-06
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 59 EVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLL 238
EV + KLR FYEK M E+ + +E N + F MKQ VL + RV LL
Sbjct: 17 EVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSMKQEVLIHFRVHLL 65
Query: 239 MSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLT 385
++ HS Y+P R E S++ V +S+L +VI+ G ++IPG T
Sbjct: 66 LNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQT 114
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 51.2 bits (117), Expect = 7e-06
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -2
Query: 388 VSQSRNFLCTFADNDQG*D*KVSINNATTNRLAFPLTVTTWSVARVA--F*HQETYTAVS 215
+ ++R+ DNDQ V ++ATT RLA T+ + A A H++ +T V
Sbjct: 126 IGEARDVGVALLDNDQVQHGNVLGDDATTARLASAFTLASAVAAEAARALGHEQEHTLVR 185
Query: 214 QDXLFHREALLVVTAGNTENITFPFV 137
Q L H EALLVVT + E+++ PF+
Sbjct: 186 QHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 50.4 bits (115), Expect = 1e-05
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +2
Query: 68 DEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSK 247
D+ + +++G ++ +LG+++ + GG+DKQGF +K+ + T R+++ + K
Sbjct: 19 DDEFIEHIIGRKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKK 78
Query: 248 GHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 370
G R +R K+++VRG I+ + +S + LV + +E
Sbjct: 79 GSLGNRSHFKRKNLTKKRTVRGGILSSEISSINLVKLPNNVKE 121
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 50.4 bits (115), Expect = 1e-05
Identities = 32/115 (27%), Positives = 57/115 (49%)
Frame = +2
Query: 38 RDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLT 217
++ R+Y + + + K +G VD + G GY +++ GG D GF MK +
Sbjct: 12 KEARAYQIDIKDAEANALIGKSIGDVVDGSIFG--LAGYKVQITGGCDGSGFVMKPDLPG 69
Query: 218 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL 382
R R+L + G Y P+ G+R+RK +RG + ++ + +V G++ I L
Sbjct: 70 PRRQRILTATGVG-YVPKLPGQRRRKMMRGKEIAPDIVQVNAKVVEYGSKSIKAL 123
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 50.0 bits (114), Expect = 2e-05
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +2
Query: 98 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRD 277
K++G EVDA LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 278 GERKRKSVR 304
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 47.6 bits (108), Expect = 9e-05
Identities = 29/109 (26%), Positives = 58/109 (53%)
Frame = +2
Query: 47 RSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSR 226
++Y + ++ +++G EVD + GY +++ GG+ GF M+ + T +
Sbjct: 15 KTYKREIPSERMSSLIGRKIGEEVDGVFF--DLVGYKMKITGGSSVDGFAMRPDLQTQGK 72
Query: 227 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 373
++L+ K S YR ++G RKR + RG I+ ++++ + L I + G I
Sbjct: 73 KQILV-KYTSGYR-GKNGIRKRITARGSIIGSDITQINLKITQYGPTPI 119
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 46.8 bits (106), Expect = 1e-04
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 104 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGE 283
+G+E DA LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 284 RKRKSVRG 307
R RK VRG
Sbjct: 95 RTRKLVRG 102
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 46.8 bits (106), Expect = 1e-04
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +2
Query: 104 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGE 283
+G D L+G G ++ GG D G PM V + R ++L++ G + PR GE
Sbjct: 142 IGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGE 198
Query: 284 RKRKSVRGCIV 316
R+RKSVRG ++
Sbjct: 199 RRRKSVRGRMI 209
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 44.4 bits (100), Expect = 8e-04
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 224 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 358
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 62
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +2
Query: 104 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGE 283
+G E DA ++G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 284 RKRKSVRGCIVDANL 328
R RK +RG V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 41.1 bits (92), Expect = 0.007
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +2
Query: 56 FEVVDEHKLRIFYEKRMGAEVDADLLGDEW---KGYVLRVAGGNDKQGFPMKQXVLTNSR 226
FE+ D R F ++G E+D +L D KG +R+ GG+ +G PM V +
Sbjct: 19 FEIKDPLAQR-FIGLKIGDELDGVILKDLIELPKGAKIRITGGSGIEGAPMHPGVPGPVK 77
Query: 227 VRLLMSKGHSCYRPRRDGERKRKSVRG-CIVDANLSVLALVIVRK 358
+ +++ G Y P + G +K+K VRG I D+ + + A+++ K
Sbjct: 78 -KYILADGPPGYWPPKKGMKKKKLVRGNTISDSIVQINAVIVYPK 121
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 36.7 bits (81), Expect = 0.16
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 92 YEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXV 211
Y K++G +D +G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q4RQ03 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1364
Score = 33.5 bits (73), Expect = 1.5
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 359 LCGQ*PGLRLKG*HQQCNHEQTCVSS--HRHDVVCSK--SGLLTSRDVHGC*SGLPVS*G 192
LCG P L G HQ C + TC+++ ++ C++ SG R H C SG P S G
Sbjct: 363 LCGTLPDLNYCGTHQPCLNGGTCINTGPDKYQCTCAEGYSGANCERAEHACLSG-PCSNG 421
>UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04650 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 33.5 bits (73), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 173 RRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPL 60
R++ GE ++ + LEDLH+L + RR+G P L
Sbjct: 154 RKRPGEEDILLNYLEDLHKLHEAWLIERRFGPLPAPVL 191
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 33.5 bits (73), Expect = 1.5
Identities = 13/61 (21%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 194 PMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV-DANLSVLALVIVRKGAQE 370
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQN 464
Query: 371 I 373
+
Sbjct: 465 L 465
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 14 KLNVHTRQRDVRSYFEVVDEHKLRIFYEKRMGAEVDADLLGDEW 145
+L R+RD+ VVDEH L FY+ R+GA+V + D+W
Sbjct: 763 ELEHRARRRDI-----VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_A1DCZ8 Cluster: C6 zinc finger domain protein; n=2;
Trichocomaceae|Rep: C6 zinc finger domain protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 438
Score = 32.3 bits (70), Expect = 3.4
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 85 TELVLIHHFKITSDIPLPGMNVQ-LHDC 5
TEL L+HHF I + + LPG ++Q + DC
Sbjct: 130 TELRLLHHFTIGTSLTLPGAHLQSIKDC 157
>UniRef50_UPI0001552B57 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 215
Score = 31.9 bits (69), Expect = 4.5
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = +2
Query: 107 GAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGER 286
GAE+ GDE G LR G +QG+ R R + HS R R G R
Sbjct: 44 GAEIPPAGAGDEPGGSTLRPCAGTRRQGYVTNARAPPRPRRRCFRAVRHSISRETRPGAR 103
>UniRef50_Q9LZ98 Cluster: Non-intrinsic ABC protein 9; n=8;
Magnoliophyta|Rep: Non-intrinsic ABC protein 9 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 328
Score = 31.9 bits (69), Expect = 4.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 137 DEWKGYVLRVAGGNDKQGFPMKQXVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 304
++W +++ VA G + PM++ T+ + LM S R RD ERKR+ R
Sbjct: 221 EDWPTHIVYVANGKLQLALPMEKVKETSK--KSLMRTVESWLRKERDEERKRRKER 274
>UniRef50_Q8IP19 Cluster: CG4952-PB, isoform B; n=15; Eumetazoa|Rep:
CG4952-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 1081
Score = 31.5 bits (68), Expect = 6.0
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 AVMKLNVHTRQRDVRSYFE--VVDEHKLRIFYEKRMGAE 115
A +K++V R+R+V+ E +VDE KLR+ Y+KR E
Sbjct: 779 AELKMDV-LREREVKDSLERQLVDERKLRVLYQKRFRRE 816
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 31.1 bits (67), Expect = 7.9
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 59 EVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQXVL 214
EV D+ K RI+YE A + GD K YV+ V G D G +K V+
Sbjct: 457 EVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTGKNLKTQVI 505
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,714,803
Number of Sequences: 1657284
Number of extensions: 6911437
Number of successful extensions: 16905
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 16439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16878
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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