Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F12
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical ... 51 6e-07
Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U42839-2|AAC69015.1| 425|Caenorhabditis elegans Venom-allergen-... 45 4e-05
U42839-1|AAM54195.1| 424|Caenorhabditis elegans Venom-allergen-... 45 4e-05
AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom allerge... 45 4e-05
AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical ... 44 5e-05
Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical pr... 37 0.007
Z70308-12|CAA94354.1| 211|Caenorhabditis elegans Hypothetical p... 35 0.030
Z70307-17|CAA94341.1| 211|Caenorhabditis elegans Hypothetical p... 35 0.030
Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical pr... 28 4.5
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 27 7.9
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 27 7.9
U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1... 27 7.9
U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1... 27 7.9
U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,... 27 7.9
>Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.10 protein.
Length = 207
Score = 58.4 bits (135), Expect = 3e-09
Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
+N HN R +AKG + T + M WD + +N+ N T
Sbjct: 27 INAHNTLRSKIAKGTYVAKGTQKSPGTNLLKMKWDSAVAASA-------QNYANGCPTGH 79
Query: 304 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHY 477
SG GENLYWY T+ S LN A SW +++DY + D IGH
Sbjct: 80 SGDAGLGENLYWYWTSGSLGDLNQYGSAASASWEKEFQDYGWKS-NLMTIDLFNTGIGHA 138
Query: 478 TQMAWSES 501
TQMAW++S
Sbjct: 139 TQMAWAKS 146
>Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.5 protein.
Length = 209
Score = 55.2 bits (127), Expect = 3e-08
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Frame = +1
Query: 40 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATE 207
++ L+LA+V C+G H++ + KQ VN HN R +AKG+ + +AT
Sbjct: 1 MQTALVLALV-CVG-AHAQ--FSEGGKQ--SMVNAHNAVRSSIAKGEYVAKGTKKDSATN 54
Query: 208 MKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYW-YSTTDST-YKLNVDN 381
M M WD L H+PDK+ G ENL+W YS++ T V +
Sbjct: 55 MLKMKWDNSLAQSAQNYANGCPMQHSPDKSYG-------ENLFWAYSSSPITDLDKYVQS 107
Query: 382 AMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSESTHV 510
A+++W ++++ + + K + IGH TQ+AWS + V
Sbjct: 108 AVDTWVSEFQMFGWNSNKFTTA-LWNTGIGHATQVAWSATGQV 149
>Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical
protein C39E9.2 protein.
Length = 208
Score = 55.2 bits (127), Expect = 3e-08
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
+N HN R +AKG + PAA++M M WD + + N T
Sbjct: 28 LNVHNTLRSRIAKGTYVAKGTAKPAASDMLKMKWDATVAASAQA-------YANKCPTGH 80
Query: 304 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNDYKDYKYAPLKQSDFDKSKPNIGHY 477
SG GENLYWY T+ + ++ A S W +++DY ++ S IGH
Sbjct: 81 SGAAGLGENLYWYWTSATITNIDQFGATGSAAWEKEFQDYGWSSNTLS-MSLFNTGIGHA 139
Query: 478 TQMAWSES 501
TQMAW+++
Sbjct: 140 TQMAWAKT 147
>Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.6 protein.
Length = 207
Score = 52.0 bits (119), Expect = 2e-07
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Frame = +1
Query: 55 ILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMV 222
+L +V CI V S+ S Q + V+ HN R +AKG + + + M+ +
Sbjct: 4 LLLLVCCIAGVFSQFT---STGQ-QAIVDAHNKLRSSIAKGTYVAKGTTQKSGSNMRKIK 59
Query: 223 WDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNV--DNAMESW 396
WD + +N+ N T S GENLYWY T+ + L+ A SW
Sbjct: 60 WDATVATSA-------QNYANTCPTGHSQGSGYGENLYWYWTSGTIGNLDTFGPAASSSW 112
Query: 397 FNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSES 501
++++ Y + D + IGH TQMAW+ +
Sbjct: 113 ESEFQQYGWTS-NTLDMNTFNTGIGHATQMAWANT 146
>AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.4 protein.
Length = 208
Score = 50.8 bits (116), Expect = 6e-07
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Frame = +1
Query: 58 LAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMVW 225
+ +C+ + + S V+ HN R +A+G + P+A+ M+ +VW
Sbjct: 1 MKFALCLLAIFGCATAQFSSTAQGQIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVW 60
Query: 226 DEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDN--AMESWF 399
DE + Q PD G+ GENLYW ++ + L+ A SW
Sbjct: 61 DETVAAAA-----QEYAEGCPDDHSGTSY---GENLYWSWSSSAPSSLDKFGVAASNSWE 112
Query: 400 NDYKDYKYAP--LKQSDFDKSKPNIGHYTQMAWSESTHV 510
++++ Y + L ++ F IGH TQMAW+E++ +
Sbjct: 113 SEFQKYGWTSTFLDEAGF---ATGIGHATQMAWAETSKI 148
>Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical
protein F09E8.5 protein.
Length = 208
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQVSGHP----AATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
+N HN R +AKG AA++M M W L ++ + N T
Sbjct: 28 LNVHNTLRSRIAKGTYVARGTVKHAASDMLKMKWLRSLATS-------SQIYANRCPTGH 80
Query: 304 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNDYKDYKYA--PLKQSDFDKSKPNIG 471
S GENLYWY T+ + ++ AM S W +++DY ++ L S F+ +G
Sbjct: 81 SNMIGVGENLYWYWTSGTITNIDQFGAMASAAWEKEFQDYGWSSNTLTMSLFNS---GVG 137
Query: 472 HYTQMAWSES 501
H TQMAW+++
Sbjct: 138 HATQMAWAKT 147
>AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.2 protein.
Length = 208
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQVSG----HPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
V HN R +A G P A M+ + WD + Q N PD G
Sbjct: 27 VKAHNDLRSAIALGNYDAAGTIEPPAANMRKIKWDSTVASSAQ----QYANTC-PDDHSG 81
Query: 304 SGRFQTGENLYWYSTTDSTYKLNVDN--AMESWFNDYKDYKYAPLKQSDFDKSKPNIGHY 477
+ + GENLYW ++ + L+ A SW +++DY + D D IGH
Sbjct: 82 T---EYGENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYM-DADLFDSGIGHA 137
Query: 478 TQMAWSESTHV 510
TQMAW+E+ +
Sbjct: 138 TQMAWAETNKI 148
>Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.4 protein.
Length = 209
Score = 48.0 bits (109), Expect = 4e-06
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +1
Query: 136 VNGHNYRRQLLAKG--QVSG--HPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
V+ HN R LA G ++G PA + ++ M WD L + + N T
Sbjct: 29 VDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSA-------QTYANTCPTGF 81
Query: 304 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNDYKDYKYAP--LKQSDFDKSKPNIG 471
S TGENLYW +T+ + L++ A SW +++ Y +A Q FD +G
Sbjct: 82 SNTQGTGENLYWRTTSANISGLDIYGGAASVSWEQEFQKYGWATNYFSQELFD---TGVG 138
Query: 472 HYTQMAWSESTHV 510
+ TQMAW+++ V
Sbjct: 139 NGTQMAWAKTNLV 151
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 46.8 bits (106), Expect = 9e-06
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Frame = +1
Query: 145 HNYRRQLLAKGQ-VSGH---PAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGR 312
HNY R +A G+ V+G+ P+A+ M ++WD L H+ + R
Sbjct: 34 HNYLRSQIALGKYVAGNSTKPSASNMMKLIWDTTLETTAQDYSTGCPTGHS------ASR 87
Query: 313 FQTGENLYWYST---TDSTYKLNVDNAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQ 483
GEN+YW+++ T + +L + + W ++++ + + ++ + IGH TQ
Sbjct: 88 ANIGENMYWWTSPVVTQTDAELLGNRSANLWESEFQRFGWNGNLLTE-ELFNSGIGHATQ 146
Query: 484 MAWSESTHV 510
MAW+ + +
Sbjct: 147 MAWATTNKI 155
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 46.0 bits (104), Expect = 2e-05
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Frame = +1
Query: 40 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQVSGH----PAATE 207
+R +L+L IG V S N S + + +N HN R LA GQ+S P+A+
Sbjct: 1 MRTVLLLLFASAIG-VWSD---NFSKEGQLNLLNVHNEFRSQLALGQLSFRGVKKPSASM 56
Query: 208 MKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYW-YSTTDSTYKLNVDNA 384
M+ + W ++L H S TGE+++W +S++ ST + A
Sbjct: 57 MRKISWSKKLTNAATKFAETCPKNH-------SVVMNTGESIFWHFSSSLSTPEQYATLA 109
Query: 385 MESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSESTHV 510
+ W+N+++ + L + + + IGH QMAW ++ V
Sbjct: 110 PQKWWNEFETNGWDSLIYNHASQ-RFQIGHAVQMAWHTTSKV 150
>U42839-2|AAC69015.1| 425|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform a protein.
Length = 425
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 322 GENLYWYSTTDSTYKLNVDNAMESWFNDYKDYKYAP---LKQSDFDKSKPNIGHYTQMAW 492
GENLY S + +++ ++W+++ KD+ L Q+ FD+ +GHYTQMAW
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 362
Query: 493 SESTHV 510
+T +
Sbjct: 363 EGTTEI 368
>U42839-1|AAM54195.1| 424|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform b protein.
Length = 424
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 322 GENLYWYSTTDSTYKLNVDNAMESWFNDYKDYKYAP---LKQSDFDKSKPNIGHYTQMAW 492
GENLY S + +++ ++W+++ KD+ L Q+ FD+ +GHYTQMAW
Sbjct: 305 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 361
Query: 493 SESTHV 510
+T +
Sbjct: 362 EGTTEI 367
>AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom
allergen-like protein protein.
Length = 425
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 322 GENLYWYSTTDSTYKLNVDNAMESWFNDYKDYKYAP---LKQSDFDKSKPNIGHYTQMAW 492
GENLY S + +++ ++W+++ KD+ L Q+ FD+ +GHYTQMAW
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 362
Query: 493 SESTHV 510
+T +
Sbjct: 363 EGTTEI 368
>AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical
protein F02E11.5 protein.
Length = 207
Score = 44.4 bits (100), Expect = 5e-05
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Frame = +1
Query: 40 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-----QVSGHPAAT 204
+RAL++LA+V + V+ + S K V+ HN R +AKG + P +
Sbjct: 1 MRALILLAVVASVS-VYGQ----FSKAGQKAIVDAHNTLRSSIAKGTYVANKTRKEPGSN 55
Query: 205 EMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD-- 378
+K M WD + + N T G G+ + GENLYW + + K D
Sbjct: 56 ILK-MKWDPTIAKSAQA-------YANTCPT-GHGKSKYGENLYW-RWSGAVIKSIDDYG 105
Query: 379 -NAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSES 501
A +W ++++ Y + K D K IGH TQMAW+ +
Sbjct: 106 VRASGAWASEFQKYGWKTNKL-DSALFKTGIGHATQMAWAST 146
>Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.9 protein.
Length = 207
Score = 43.6 bits (98), Expect = 8e-05
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
V+ HN R +AK + AT+M+ MV D + +N+ N T
Sbjct: 25 VDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASA-------QNYANTCPTGH 77
Query: 304 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHY 477
S GENLYW T+ L+ + A +W +++D+ + D IGH
Sbjct: 78 SKGTGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKS-NAMDTTLFNSGIGHA 136
Query: 478 TQMAWSESTHV 510
TQMAW+ ++ +
Sbjct: 137 TQMAWANTSSI 147
>AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical
protein B0545.3 protein.
Length = 258
Score = 41.9 bits (94), Expect = 3e-04
Identities = 38/139 (27%), Positives = 55/139 (39%), Gaps = 6/139 (4%)
Frame = +1
Query: 103 LNLSCKQIKDFVNGHNYRRQLLAKGQVSGH----PAATEMKYMVWDEELXXXXXXXXXQ- 267
LNL + ++ HN R +A GQ + P A M + WD EL Q
Sbjct: 43 LNLPARLQNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQC 102
Query: 268 NKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNDYKD-YKYAPLKQSD 444
N N + + GEN +++ TTD L+V A+ D A +K
Sbjct: 103 NLQKENSGRQMNGWDEVRGENAFYFRTTDG---LDVSGAVLKGIQRMGDEIAIAGIKNLK 159
Query: 445 FDKSKPNIGHYTQMAWSES 501
+ IGH TQ+ W E+
Sbjct: 160 LSRYDSRIGHATQILWKET 178
>Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical
protein T05A10.5 protein.
Length = 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Frame = +1
Query: 145 HNYRRQLLAKG------QVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 306
HN+ R LAKG + P A++M M +D L H+
Sbjct: 62 HNFYRSRLAKGFEWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFAHSAHYE--- 118
Query: 307 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNDYKDYKYA---PLKQSDFDKSKPNIGHY 477
R G+NLY S ++ + + A+E W+ + +++ L +D IGHY
Sbjct: 119 -RPNQGQNLYMSSFSNPDPRSLIHTAVEKWWQELEEFGTPIDNVLTPELWDLKGKAIGHY 177
Query: 478 TQMAWSES 501
TQMAW +
Sbjct: 178 TQMAWDRT 185
>Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical
protein F35E12.1 protein.
Length = 290
Score = 37.5 bits (83), Expect = 0.006
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 6/125 (4%)
Frame = +1
Query: 145 HNYRRQLLAKGQVSGH----PAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGR 312
HN R +AKG P A++M + WD+ + + H KT
Sbjct: 112 HNDLRSEIAKGLFLAKGIEKPPASDMMKISWDDSIAESAQTFIEKCPMNHT--KT----- 164
Query: 313 FQTGENLY--WYSTTDSTYKLNVDNAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQM 486
+ GEN++ W S + + A ESW +++ + + D K IGH TQM
Sbjct: 165 -EYGENMHRSWSSKEITDLDIYGTKAAESWAGEFQKKGWESNIYTK-DTEKSGIGHATQM 222
Query: 487 AWSES 501
WS++
Sbjct: 223 VWSQA 227
>Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical
protein T12A7.3 protein.
Length = 262
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 196 AATEMKYMVWDEELXXXXXXXXXQNKNFHN--PDKTLGSGRFQTGENLYWY-STTDSTYK 366
A + +K VW+ L +N + H+ PD GENL+W+ ST +
Sbjct: 104 AGSNIKKFVWNATLERSAYSFAQKNPSQHSFIPD---------IGENLFWHWSTRPGDFN 154
Query: 367 LNVDNAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSES 501
A SW ++++ K+ D +GH TQM W+++
Sbjct: 155 KYGPMAALSWIKEFRE-KFWDSNILTNDLFGSGVGHATQMVWADT 198
>Z70308-12|CAA94354.1| 211|Caenorhabditis elegans Hypothetical
protein F49E11.11 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.030
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
V+ HN R +AKG + A + + M WD L + F N
Sbjct: 29 VDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAA-------QTFANTCPRGH 81
Query: 304 SGRFQTGENLYWY--STTDSTYKLNVDNAMESWFNDYKDYKYAPLKQSDFDKSKPN--IG 471
S GENLYW S S + A +W +++ Y + + F ++ N IG
Sbjct: 82 SNAAGVGENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTT---NTFTQALANTGIG 138
Query: 472 HYTQMAWSES 501
H TQMAW+ +
Sbjct: 139 HATQMAWANT 148
>Z70307-17|CAA94341.1| 211|Caenorhabditis elegans Hypothetical
protein F49E11.11 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.030
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Frame = +1
Query: 136 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 303
V+ HN R +AKG + A + + M WD L + F N
Sbjct: 29 VDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAA-------QTFANTCPRGH 81
Query: 304 SGRFQTGENLYWY--STTDSTYKLNVDNAMESWFNDYKDYKYAPLKQSDFDKSKPN--IG 471
S GENLYW S S + A +W +++ Y + + F ++ N IG
Sbjct: 82 SNAAGVGENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTT---NTFTQALANTGIG 138
Query: 472 HYTQMAWSES 501
H TQMAW+ +
Sbjct: 139 HATQMAWANT 148
>Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical
protein C07A4.2 protein.
Length = 417
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 GENLYWYSTTDSTYKLNVDNAM-ESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSE 498
GENL+++ + A+ +S++ + Y Y+ + F K+ GH+TQ+ W
Sbjct: 305 GENLFFFGARHLPSPQTLAAAVIQSFYLEGIGYNYSSWRPMSFFKT----GHFTQLIWKN 360
Query: 499 STHV 510
S +
Sbjct: 361 SRKI 364
>Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.1 protein.
Length = 401
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 185 DT*PLASNCLL*LCPLTKSLICLHDKFSRDLL 90
D LA NC+ ++K +IC+H S DL+
Sbjct: 217 DAFQLAFNCMPLCAVVSKKIICMHGGISEDLI 248
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 283 NPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNDYKDY 417
N +K + R T E YW T TY++N+ M DY+D+
Sbjct: 550 NKEKANFTARVITPE--YW--PTYDTYEINIPKEMRDTLTDYQDF 590
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 283 NPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNDYKDY 417
N +K + R T E YW T TY++N+ M DY+D+
Sbjct: 587 NKEKANFTARVITPE--YW--PTYDTYEINIPKEMRDTLTDYQDF 627
>U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1,
isoform c protein.
Length = 287
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/104 (23%), Positives = 42/104 (40%)
Frame = +1
Query: 199 ATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD 378
A++M + W +EL ++ D GR GEN++ + Y N
Sbjct: 97 ASDMNMLYWSDELAASA------QRHADTCDFRHSRGRINVGENIW-----AAPYS-NYS 144
Query: 379 NAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSESTHV 510
+A+ WFN+ + + K GHY Q+ W+++ V
Sbjct: 145 DAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQVVWAKTNLV 183
>U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1,
isoform b protein.
Length = 301
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/104 (23%), Positives = 42/104 (40%)
Frame = +1
Query: 199 ATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD 378
A++M + W +EL ++ D GR GEN++ + Y N
Sbjct: 97 ASDMNMLYWSDELAASA------QRHADTCDFRHSRGRINVGENIW-----AAPYS-NYS 144
Query: 379 NAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSESTHV 510
+A+ WFN+ + + K GHY Q+ W+++ V
Sbjct: 145 DAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQVVWAKTNLV 183
>U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,
isoform a protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/104 (23%), Positives = 42/104 (40%)
Frame = +1
Query: 199 ATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD 378
A++M + W +EL ++ D GR GEN++ + Y N
Sbjct: 97 ASDMNMLYWSDELAASA------QRHADTCDFRHSRGRINVGENIW-----AAPYS-NYS 144
Query: 379 NAMESWFNDYKDYKYAPLKQSDFDKSKPNIGHYTQMAWSESTHV 510
+A+ WFN+ + + K GHY Q+ W+++ V
Sbjct: 145 DAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQVVWAKTNLV 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,933,427
Number of Sequences: 27780
Number of extensions: 240508
Number of successful extensions: 612
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -