Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F09
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   5.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   5.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   7.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 322 PRVWIGLYINALKSHRKH*SDHVIPCLM 239
           P VW  ++  A+    +  ++HVI C++
Sbjct: 772 PMVWYQMFEYAIGHWLQKATEHVIGCVL 799


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 322 PRVWIGLYINALKSHRKH*SDHVIPCLM 239
           P VW  ++  A+    +  ++HVI C++
Sbjct: 772 PMVWYQMFEYAIGHWLQKATEHVIGCVL 799


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 322 PRVWIGLYINALKSHRKH*SDHVIPCLM 239
           P VW  ++  A+    +  ++HVI C++
Sbjct: 772 PMVWYQMFEYAIGHWLQKATEHVIGCVL 799


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 322 PRVWIGLYINALKSHRKH*SDHVIPCLM 239
           P VW  ++  A+    +  ++HVI C++
Sbjct: 772 PMVWYQMFEYAIGHWLQKATEHVIGCVL 799


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 99  FAQDITTDNQLNGN 140
           F   IT +NQ NGN
Sbjct: 482 FTYKITVNNQSNGN 495


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 324 LPVFGSVFTLMLSNLT 277
           +P FG  FTL  +N T
Sbjct: 417 VPFFGRSFTLQFTNET 432


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 135 GNSEHGGGDGQDNSA 179
           G  + GGGD   NSA
Sbjct: 108 GRGDLGGGDTSPNSA 122


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 324 LPVFGSVFTL 295
           LPV+G  FTL
Sbjct: 260 LPVYGKTFTL 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,557
Number of Sequences: 336
Number of extensions: 1379
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)