Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F09
         (330 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   5.1  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   5.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   5.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   5.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   5.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   8.9  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 220 GGLSWETSDKELRD 261
           GG+ WE  +KE+ D
Sbjct: 100 GGIFWEGLEKEVGD 113


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 223 GLSWETSDKELRDHF 267
           G+S ET  K + DHF
Sbjct: 155 GMSKETQQKLIDDHF 169


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 260 ITSVLTVRFESINVKTD 310
           IT+VLT+ F  +  +TD
Sbjct: 250 ITTVLTMTFLGLEARTD 266


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 223 GLSWETSDKELRDHF 267
           G+S ET  K + DHF
Sbjct: 171 GMSKETQQKLIDDHF 185


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 86  SHDLYYLNT 60
           SH LYY+NT
Sbjct: 270 SHGLYYVNT 278


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 92  VISHDLYYLNT 60
           ++SH LYY++T
Sbjct: 273 LLSHGLYYVDT 283


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,862
Number of Sequences: 438
Number of extensions: 1792
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)