Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F08
         (557 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55783 Cluster: PREDICTED: hypothetical protein;...    39   0.091
UniRef50_UPI0000E489B6 Cluster: PREDICTED: hypothetical protein;...    36   0.64 
UniRef50_Q9W3J7 Cluster: CG2120-PA; n=3; Drosophila melanogaster...    33   4.5  
UniRef50_A7RZD1 Cluster: Predicted protein; n=1; Nematostella ve...    32   7.9  

>UniRef50_UPI0000D55783 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 66

 Score = 38.7 bits (86), Expect = 0.091
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 291 SMKKPVTVSTSKYPTTKKEEQKKD-YGAWGSIYKDKKTFTEMHLC 422
           S KK    S SK     K ++K + YGAWGS++K+K  F  +H C
Sbjct: 22  SSKKSSFESFSKKDNGHKTDKKDNQYGAWGSVFKNKDHFASLHHC 66


>UniRef50_UPI0000E489B6 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 87

 Score = 35.9 bits (79), Expect = 0.64
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 336 TKKEEQKKDYGAWGSIYKDKKTFTEMHL 419
           TK E+    YG WG + K ++ F +MHL
Sbjct: 59  TKNEQTSASYGVWGPVLKSRRDFVDMHL 86


>UniRef50_Q9W3J7 Cluster: CG2120-PA; n=3; Drosophila
           melanogaster|Rep: CG2120-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 344

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 37  CAQEKCSRRANTGNRLEHAVLTHIQHVP*FPCPLPALSYHHPSPSYRRQLSTSER 201
           C Q +C +R  + + L+H  + H Q  P F CPL    +   S ++++ L   ER
Sbjct: 292 CPQPECGKRFFSASELKHHQIAHTQQRP-FACPLCPARFLRKS-NHKQHLKVHER 344


>UniRef50_A7RZD1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 725

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 219 MARGDECKTATKANFACKSYDVSASMKKPVTV--STSKYPTTKKEEQKKDYGAWGSIYKD 392
           M +  +  + T++   CKS D S S K   T+    SKYP TKK  +  +    G +Y+D
Sbjct: 221 MEKNRQDNSKTRSQQKCKSDDFSPSTKPDSTIIRKDSKYPRTKKRSKSHN---GGLLYRD 277


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,680,322
Number of Sequences: 1657284
Number of extensions: 9824255
Number of successful extensions: 27844
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27825
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)