Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F08
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   0.73 
AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    23   5.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.0  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 74  VTGWNTQFLPTFSTCHSFPAPYRPYPIIIHLPLTGVSLVRVKETDAC 214
           +TG  T FLP      + PA YRP   + +L     S++  K  D C
Sbjct: 514 ITGGVTYFLPKDQNTKN-PAKYRPLTCLSNLNKVLSSVITQKVKDHC 559


>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 115 VP*FPCPLPALSYHHPSPSYRRQLSTSERDRCL 213
           +P   CP+      H +  YRRQ++   +  C+
Sbjct: 28  IPFDRCPIALRKMQHKTDEYRRQVNRYGKVPCI 60


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 143 PYPIIIHLPL 172
           PYPIII LPL
Sbjct: 631 PYPIIIPLPL 640


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,786
Number of Sequences: 2352
Number of extensions: 10610
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)