Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F05
         (197 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    42   0.003
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    39   0.019
UniRef50_Q5B2I5 Cluster: Predicted protein; n=1; Emericella nidu...    31   6.5  
UniRef50_A2W4K5 Cluster: Transcriptional regulator; n=2; Burkhol...    30   8.6  

>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 10  TRGTAVSDIWFMHSAERPVVRSYH 81
           TRGTA SD W +H AE+P+VRSYH
Sbjct: 666 TRGTADSDNWHLHLAEKPMVRSYH 689


>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 39.1 bits (87), Expect = 0.019
 Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -2

Query: 127 ARLASA----LEAFRHNPADGSFXXXXXXXXX*TKCPKLRFLSYLV 2
           AR+AS+    LEAF HNP  GSF          T C   RFLSY V
Sbjct: 4   ARIASSPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYV 49


>UniRef50_Q5B2I5 Cluster: Predicted protein; n=1; Emericella
           nidulans|Rep: Predicted protein - Emericella nidulans
           (Aspergillus nidulans)
          Length = 198

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = -2

Query: 115 SALEAFRHNPADGSFXXXXXXXXX*TKCPKLRFLSY 8
           S LEAF H PADGS           T     RFLSY
Sbjct: 163 SDLEAFSHYPADGSVAALPGQTAAKTNYLNQRFLSY 198


>UniRef50_A2W4K5 Cluster: Transcriptional regulator; n=2;
           Burkholderia|Rep: Transcriptional regulator -
           Burkholderia cenocepacia PC184
          Length = 261

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 59  GRWCEATIRGIMPERL*CRSQPSRIRQRYAHCGAPRV 169
           GR CE+T+  I PER     + S +  R+  CGAP V
Sbjct: 217 GRTCESTLFHIRPERFDLVVR-SGVEARFVACGAPSV 252


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,240,842
Number of Sequences: 1657284
Number of extensions: 3528145
Number of successful extensions: 8458
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8457
length of database: 575,637,011
effective HSP length: 45
effective length of database: 501,059,231
effective search space used: 10021184620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)