Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F05
         (197 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   1.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   1.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   2.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   2.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                19   4.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   5.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   5.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   5.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   7.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   7.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    18   9.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    18   9.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    18   9.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    18   9.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    18   9.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 96  GIIPRMVASHHRPLGRVHEPNVR 28
           G I  ++AS HR L      NVR
Sbjct: 219 GRISCVIASRHRNLEATESENVR 241


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 24  SFGHLVHALGRAAGGAKLPSAG 89
           S   LV A+   AGG   PSAG
Sbjct: 393 SMSALVSAVRSPAGGQLPPSAG 414



 Score = 19.0 bits (37), Expect = 5.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 178 EPPDSRGSTVSISLPDSARLASAL 107
           EPP S  S+   S+P    L++AL
Sbjct: 354 EPPKSSESSTGSSIP-KLNLSTAL 376


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 71  RTTGRSAECMNQMSETAVPLV 9
           +  G+  +C N MSE  V ++
Sbjct: 170 KENGKEFDCHNYMSELTVDIL 190


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 101 RL*CRSQPSRIRQRY 145
           R+ C   P R+R+RY
Sbjct: 403 RILCACCPGRVRRRY 417


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 4   RGTRGTAVSDIWFMHSAERP 63
           +GT  T    +W  +  ERP
Sbjct: 282 KGTYKTLYKQMWSQNITERP 301


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = -3

Query: 93  IIPRMVASHHRPLGRVHEPN 34
           ++PR ++ H  P   +  PN
Sbjct: 653 LLPRPISCHTTPDSFIEAPN 672


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
          protein.
          Length = 492

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 26 FRTFGSCTRPS 58
          F    SCTRPS
Sbjct: 10 FLLLSSCTRPS 20


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
          protein.
          Length = 628

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 26 FRTFGSCTRPS 58
          F    SCTRPS
Sbjct: 10 FLLLSSCTRPS 20


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 63  RPLGRVHEPNVRNCG 19
           RP+ RV +    NCG
Sbjct: 140 RPIKRVKDSTNCNCG 154


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 21  RSFGHLVHALGR 56
           R FGH ++ LGR
Sbjct: 316 RIFGHHLNRLGR 327


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
          channel variant 4 protein.
          Length = 489

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 45 ALGRAAGG 68
          ALGR AGG
Sbjct: 5  ALGRCAGG 12


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
          channel variant 3 protein.
          Length = 475

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 45 ALGRAAGG 68
          ALGR AGG
Sbjct: 5  ALGRCAGG 12


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
          channel variant 1 protein.
          Length = 509

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 45 ALGRAAGG 68
          ALGR AGG
Sbjct: 5  ALGRCAGG 12


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
          channel protein.
          Length = 458

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 45 ALGRAAGG 68
          ALGR AGG
Sbjct: 5  ALGRCAGG 12


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 40  TKCPKLRFLSYL 5
           TKCP   + SY+
Sbjct: 633 TKCPYPSYYSYI 644


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,443
Number of Sequences: 438
Number of extensions: 919
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2668491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)