Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F02
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 210 1e-53
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 199 3e-50
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 179 3e-44
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 173 2e-42
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 171 1e-41
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 163 2e-39
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 162 3e-39
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 160 1e-38
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 141 9e-33
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 139 4e-32
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 138 5e-32
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 137 1e-31
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 136 3e-31
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 134 1e-30
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 133 2e-30
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 129 4e-29
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 126 2e-28
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 125 6e-28
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 122 3e-27
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 112 5e-24
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 111 1e-23
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 108 8e-23
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 101 1e-20
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 100 2e-20
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 99 5e-20
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 91 1e-17
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 89 5e-17
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 81 2e-14
UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1... 78 1e-13
UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1... 78 1e-13
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 76 5e-13
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 75 9e-13
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 74 2e-12
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 72 8e-12
UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PC... 70 3e-11
UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3; Meth... 70 3e-11
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 67 2e-10
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 64 1e-09
UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa calif... 60 2e-08
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 60 3e-08
UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1; Meta... 58 1e-07
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 58 1e-07
UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6; Su... 55 8e-07
UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1; Cald... 53 3e-06
UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n... 52 7e-06
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 51 2e-05
UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp sub... 49 7e-05
UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;... 48 9e-05
UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1; Ther... 47 2e-04
UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1; Stap... 47 3e-04
UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5; Ther... 47 3e-04
UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1; Meth... 45 0.001
UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4; Py... 43 0.003
UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1; A... 41 0.018
UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089... 40 0.024
UniRef50_Q97Z84 Cluster: DNA polymerase sliding clamp C; n=3; Su... 40 0.024
UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1; Acan... 38 0.13
UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2; Nano... 37 0.29
UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n... 36 0.39
UniRef50_A4VI92 Cluster: TonB-dependent siderophore receptor; n=... 35 0.90
UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_A3DBG8 Cluster: Ig-like, group 2 precursor; n=1; Clostr... 33 3.6
UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9; ... 33 4.8
UniRef50_Q7VD56 Cluster: Thermonuclease homolog; n=1; Prochloroc... 32 6.3
UniRef50_Q5CPL9 Cluster: Signal peptide, large protein; n=2; Cry... 32 6.3
UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5; Methanos... 32 6.3
UniRef50_UPI00006CC466 Cluster: hypothetical protein TTHERM_0013... 32 8.3
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 210 bits (513), Expect = 1e-53
Identities = 93/137 (67%), Positives = 120/137 (87%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQE+VSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 449 LDLEHLGIPETEYSCTI 499
LD+E LGIPE EYSC +
Sbjct: 121 LDVEQLGIPEQEYSCVV 137
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 199 bits (485), Expect = 3e-50
Identities = 87/133 (65%), Positives = 112/133 (84%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M E RL++ S+LKKVLEA+KDL+ A FDC G LQAMD+SHV+LVSL LR++GF+ Y
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDRN+SMGMNLG+MSK+LKCAG+ D +T+KA D +DTVTF FESP Q++++D+EMKLM+
Sbjct: 61 RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 449 LDLEHLGIPETEY 487
+D EHLGIP+ EY
Sbjct: 121 IDSEHLGIPDAEY 133
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 179 bits (436), Expect = 3e-44
Identities = 77/137 (56%), Positives = 108/137 (78%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EAR+ ++ +LKK+L+AIK+L++ DC + GI LQAMDNSH++LV+L L A FD+Y
Sbjct: 1 MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQAMDNSHIALVALKLEASEFDEY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDRN+ +G+NL S++KILKCA D D VT+KA D+AD + FESP +++V +YEMKLM+
Sbjct: 61 RCDRNMPLGVNLASLTKILKCAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMD 120
Query: 449 LDLEHLGIPETEYSCTI 499
+D EHLGIP+T+Y T+
Sbjct: 121 IDQEHLGIPDTQYDATV 137
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 173 bits (420), Expect = 2e-42
Identities = 74/137 (54%), Positives = 110/137 (80%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EARL ++ +LKKV++AIKDL+ FDC+D+GI LQAMDNSHV+LVS+ L+A+GF Y
Sbjct: 1 MLEARLEQADLLKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEGFSPY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDRN+++G+NL S++K+L+ A ++D +T+KA+D D + FES +++S+Y++KLM+
Sbjct: 61 RCDRNVALGVNLTSLTKVLRAAQNEDILTIKAEDAPDVLNLVFESSESDRLSEYDLKLMD 120
Query: 449 LDLEHLGIPETEYSCTI 499
+D EHLGIP+TEY+ I
Sbjct: 121 IDQEHLGIPDTEYAAVI 137
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 171 bits (415), Expect = 1e-41
Identities = 70/137 (51%), Positives = 109/137 (79%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
CDRN+S+G++L S+ K+LKCA D VT+KA D + +T +FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 449 LDLEHLGIPETEYSCTI 499
LD +H+ IP+ +Y+C I
Sbjct: 121 LDQDHMEIPKKDYTCFI 137
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 163 bits (396), Expect = 2e-39
Identities = 69/137 (50%), Positives = 103/137 (75%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EA+L + +LKK+L+AIK+L+T A F+C++ GI LQAMDNSHV+LV++ + GF +Y
Sbjct: 1 MLEAKLAEAGLLKKLLDAIKELVTDANFECNEEGINLQAMDNSHVALVAVKILVSGFKRY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDR + +G+NLGS++K+LKCA D D T+KA D AD + +E+ N +++++YEMKLM
Sbjct: 61 RCDRPMPLGVNLGSLTKVLKCAKDDDICTLKAADEADVLNLIYEAKNSDRIAEYEMKLME 120
Query: 449 LDLEHLGIPETEYSCTI 499
+D + L IP+TEY +
Sbjct: 121 IDADALTIPDTEYEARV 137
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 162 bits (394), Expect = 3e-39
Identities = 69/137 (50%), Positives = 105/137 (76%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EARL + +LKKVL+A+++L+T A F+C ++GI+LQAMDNSHV+L ++ LR D F+++
Sbjct: 1 MLEARLPEAVLLKKVLDAVRELITDANFECSEDGIRLQAMDNSHVALSAIELRTDCFEEF 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDR +S+G++L S+ KILK A + D + +K D+ DT+ FESP ++V ++EMKLM+
Sbjct: 61 RCDRPMSIGVSLSSLGKILKSANNDDVLALKKSDDGDTLQMTFESPKSDRVGEFEMKLMD 120
Query: 449 LDLEHLGIPETEYSCTI 499
+D EHLGIP+T+Y +
Sbjct: 121 IDSEHLGIPDTQYDAVV 137
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 160 bits (389), Expect = 1e-38
Identities = 67/137 (48%), Positives = 98/137 (71%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFEA ++LK+++E KDLL ATFDCD+ G+ +Q MD SHV+LVSL L A+GF KY
Sbjct: 1 MFEAEFKTGAVLKRLVETFKDLLPHATFDCDNRGVSMQVMDTSHVALVSLQLHAEGFKKY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDRN+ + +++ S+SKI+KC ++ +V MKA+D D + F F N ++ Y +KLM
Sbjct: 61 RCDRNVPLNVSINSLSKIVKCVNERSSVLMKAEDQGDVMAFVFN--NDNRICTYTLKLMC 118
Query: 449 LDLEHLGIPETEYSCTI 499
+D+EHLGIP+++Y C +
Sbjct: 119 IDVEHLGIPDSDYDCVV 135
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 141 bits (341), Expect = 9e-33
Identities = 62/131 (47%), Positives = 96/131 (73%)
Frame = +2
Query: 95 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 274
EA L ++ +LKKV++AIKDL FDC + G+Q+Q+MD+SHV+LVSL LR F ++RC
Sbjct: 4 EAHLQQAVLLKKVVDAIKDLCKDVNFDCSEKGLQVQSMDSSHVALVSLLLRESAFAEFRC 63
Query: 275 DRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLD 454
DR S+GMN+ S++KILK G D++ ++ + +AD V+F ES +++++D+E+KLM ++
Sbjct: 64 DRPTSLGMNVDSLAKILKMCGTSDSLKLRWRGDADMVSFQCESGEEDRIADFELKLMQIE 123
Query: 455 LEHLGIPETEY 487
EH+ IPE Y
Sbjct: 124 SEHMEIPEQHY 134
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 139 bits (336), Expect = 4e-32
Identities = 59/137 (43%), Positives = 99/137 (72%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFEARL IL+KV EAI +L++ +C+++G+ +QAMDNSHVSLV L L+ F++Y
Sbjct: 1 MFEARLSNGGILRKVFEAITNLVSDVNLECNESGVTIQAMDNSHVSLVGLYLKDTAFERY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCD+N ++G+N ++ K+LK + D V ++ D+++++ F FE+PN ++VS++E+ L++
Sbjct: 61 RCDKNRTLGLNTQNVVKLLKLCSNDDQVLLRHDDDSESLIFIFETPNGDRVSEFELTLIS 120
Query: 449 LDLEHLGIPETEYSCTI 499
+D + L IPET +S +
Sbjct: 121 IDQDSLQIPETSFSSVV 137
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 138 bits (335), Expect = 5e-32
Identities = 58/137 (42%), Positives = 94/137 (68%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M E RL LKK+L+A++DL+ +A +C + G+ LQAMD +HV+LVS+ L A+GF+KY
Sbjct: 1 MVECRLTNPGNLKKILDALRDLVEEANIECSETGLSLQAMDTAHVALVSMNLNANGFEKY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
C +N S+G+NLG++ KILKC + D +T++ ++ + F FE+ + ++ +++M LM+
Sbjct: 61 NCAQNTSLGVNLGAIQKILKCGDNNDVLTLETNEDQSCLKFKFENSSSDRYFEFQMNLMD 120
Query: 449 LDLEHLGIPETEYSCTI 499
+ EHL IP+ E TI
Sbjct: 121 ISSEHLSIPDAEPEATI 137
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 137 bits (332), Expect = 1e-31
Identities = 61/138 (44%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFEA+ + KK++EAIK+L+ + + GI LQAMD SHV+LV+L L GF KY
Sbjct: 1 MFEAKFEDGVLFKKIVEAIKELVKNVNLEANGTGISLQAMDTSHVALVALQLNEKGFKKY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQ-DNADTVTFAFESPNQEQVSDYEMKLM 445
RC+++++MG+++ ++ KILKC+G+ D +T++ Q + T++F FES N ++S++++ LM
Sbjct: 61 RCEKSLTMGLSIENLQKILKCSGNDDQITLRTQEEEPTTLSFTFESKN--RISEFQLNLM 118
Query: 446 NLDLEHLGIPETEYSCTI 499
+LD E LG+P+T+YS I
Sbjct: 119 SLDQEQLGVPDTDYSSVI 136
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 136 bits (328), Expect = 3e-31
Identities = 57/137 (41%), Positives = 97/137 (70%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EA++ +S+ K+++E I L+ +A FDC+ G+ +QAMD+SHV+LV + LR D F KY
Sbjct: 1 MLEAQVQYASLWKRLVECINGLVNEANFDCNPGGLSIQAMDSSHVALVHMLLRDDCFVKY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
+C+RNI +G+NL S+SK+LK D+++++ D++D VT E+P + + +Y++KL+
Sbjct: 61 QCERNIILGLNLASLSKVLKIVDGNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQLKLLE 120
Query: 449 LDLEHLGIPETEYSCTI 499
++ E +GIPE +Y T+
Sbjct: 121 IEAESMGIPEMDYRSTV 137
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 134 bits (323), Expect = 1e-30
Identities = 58/132 (43%), Positives = 94/132 (71%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EA+L +SILKK+ E IKDL+ A D D++G++LQA+D +HVSLVSL L GF Y
Sbjct: 1 MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQALDGNHVSLVSLHLLDSGFSHY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDR +G+N+ S++K+ K G ++V + ++D+ D + F FE+ +++V+++ +KLM+
Sbjct: 61 RCDRERVLGVNIASLNKVFKLCGANESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLMS 120
Query: 449 LDLEHLGIPETE 484
++L+ L IP+ E
Sbjct: 121 IELDSLNIPDCE 132
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 133 bits (321), Expect = 2e-30
Identities = 64/132 (48%), Positives = 88/132 (66%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M E R ++ S+LKKV E IK+ + F C GI +QAM NS++S+++L L + GF+ Y
Sbjct: 1 MLEVRFVQGSLLKKVSEIIKEFIHDTNFYCSSTGIIVQAM-NSNLSILALVLHSSGFEHY 59
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCD N SMGMNL SM ++L A D +T+KA D DTVTF FESP Q Q+S++EM+L++
Sbjct: 60 RCDHNFSMGMNLYSMVELLNRANGDDIITIKADDGGDTVTFTFESPRQNQISNFEMRLVD 119
Query: 449 LDLEHLGIPETE 484
+D I E E
Sbjct: 120 IDSPRYWIREDE 131
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 129 bits (311), Expect = 4e-29
Identities = 55/132 (41%), Positives = 94/132 (71%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EA+L +S+L+++ E+IKD+++ DCD+ G++LQAMD+SHV+LV+L L GF +
Sbjct: 1 MLEAKLQHASVLRRLFESIKDMVSDVNLDCDETGLRLQAMDSSHVALVALKLDDAGFVHF 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDR +G+NL S+ K+ K + D+ +++ ++++DTVTF FE+ E++S + ++LM
Sbjct: 61 RCDRERLLGLNLASVCKVFKLCSNADSCSIQNEEDSDTVTFVFENEADEKLSSFSLRLMA 120
Query: 449 LDLEHLGIPETE 484
+D + L +PE E
Sbjct: 121 IDQDALRVPEDE 132
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 126 bits (305), Expect = 2e-28
Identities = 57/137 (41%), Positives = 98/137 (71%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M A+L +S+LKK+++A+KDL++ A + ++G+ LQAMD+SHVSLVSL + + F+ Y
Sbjct: 1 MLRAKLSSNSLLKKIVDAVKDLISDANIEFTNSGLSLQAMDSSHVSLVSLIIPPEEFEVY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
+C++ S+G+NL KILKCA ++D+V + ++N + +TF F + E+ S+++++L+
Sbjct: 61 QCEKIQSLGINLNWFYKILKCATNEDSVEIIYKNNENFITFLFRNEANERSSEFQLRLLE 120
Query: 449 LDLEHLGIPETEYSCTI 499
++ E LGIPET YS +
Sbjct: 121 INNETLGIPETIYSAVV 137
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 125 bits (301), Expect = 6e-28
Identities = 61/141 (43%), Positives = 89/141 (63%), Gaps = 4/141 (2%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFEARL + + KK+ EA+K+L DCD +G+ LQAMD+SHV+LVSL ++ D F+ Y
Sbjct: 1 MFEARLQNAMLFKKIAEALKELCHDINIDCDSDGLHLQAMDSSHVALVSLNIQPDAFEHY 60
Query: 269 RCDRNISMGMNLGSMSKILK-CAGDKDTVTMKAQDNADT-VTFAFESPNQEQVSDYE--M 436
RCDR + +G+++ +SK +K C D K DN D +T FE N +S E +
Sbjct: 61 RCDRPVVLGLDMQQLSKFMKFCDKDTSMTLKKYDDNEDNRITMCFED-NSGILSSKECIL 119
Query: 437 KLMNLDLEHLGIPETEYSCTI 499
+LM+++ EH+ IPE EY C +
Sbjct: 120 RLMDIEQEHISIPEEEYECNV 140
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 122 bits (295), Expect = 3e-27
Identities = 51/137 (37%), Positives = 90/137 (65%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M EA+ +S+ K++++ KD + F C ++GI QA+D+S V LVSL + + F +Y
Sbjct: 1 MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCD +++GM+L S+SKIL+C + DT+T+ A + D++ FE ++++++Y +KLM+
Sbjct: 61 RCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMD 120
Query: 449 LDLEHLGIPETEYSCTI 499
+D + L I E +Y T+
Sbjct: 121 IDADFLKIEELQYDSTL 137
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 112 bits (269), Expect = 5e-24
Identities = 49/101 (48%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Frame = +2
Query: 191 IQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQD 370
+ LQAMD+SHV+LVSL L FD YRCDR I++G++L +MSK LKCA + DT +K ++
Sbjct: 1 MSLQAMDSSHVALVSLKLEVGLFDTYRCDRTINLGLSLANMSKALKCANNDDTCMLKYEE 60
Query: 371 N-ADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPETEYS 490
N D++ F F P +++ D +K+M++D EHLGIP+ +Y+
Sbjct: 61 NEGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIPDQDYA 101
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 111 bits (266), Expect = 1e-23
Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 6/141 (4%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFE R+ KK+ E +KD+ T+ +CD+NGI++Q+MD SHVSLV L + +D F Y
Sbjct: 1 MFECRI-DGQFFKKLFETLKDICTEVNLECDENGIKMQSMDCSHVSLVDLNIVSDFFQHY 59
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVS------DY 430
RCD+N +G+++ M KIL +K TV + +DN + ++E+ S +
Sbjct: 60 RCDKNCVLGISINFMLKILSVIKEKSTVFLFKEDNENDAVLNIGIIDEEEQSSADDSLEI 119
Query: 431 EMKLMNLDLEHLGIPETEYSC 493
++KL+N EHL IP++EY C
Sbjct: 120 QVKLINAQKEHLEIPQSEYHC 140
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 108 bits (259), Expect = 8e-23
Identities = 45/130 (34%), Positives = 84/130 (64%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M E +L + +L+++ + ++D+++ D D G+ LQA+D +HV+LV L L GF Y
Sbjct: 1 MLELKLNHAVVLRRIFDCMRDIISDGNIDFDATGMSLQALDGNHVALVHLKLHESGFSLY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
RCDR ++G+NL S++K K + D+V +++++ D ++F FE+ ++V + +KLM+
Sbjct: 61 RCDRPRALGINLNSVTKAFKSCSNHDSVLIQSEEEKDYISFIFENNVDDRVMSFSLKLMS 120
Query: 449 LDLEHLGIPE 478
++ + L IPE
Sbjct: 121 IEQDALSIPE 130
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 101 bits (241), Expect = 1e-20
Identities = 49/142 (34%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFE RL L+++ EA++++ + DC ++G+ +QAMDNSH+SL+ L L D F Y
Sbjct: 1 MFECRL-DGMFLRRLFEALREICNDVSIDCSEDGLSMQAMDNSHISLIHLCLAPDFFQLY 59
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTM-KAQDNADTVTFA--FESPNQEQVS----D 427
RCD ++G+N+ M KIL +K + + + D+ D V F E+ ++ +
Sbjct: 60 RCDTPCTLGLNISFMLKILAVVREKSVIYLARGDDSEDPVLFVRIIEAGGYDEAESDALE 119
Query: 428 YEMKLMNLDLEHLGIPETEYSC 493
++K+++++ EHL IP+ EY+C
Sbjct: 120 AQVKMIDVEREHLDIPDCEYTC 141
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 100 bits (240), Expect = 2e-20
Identities = 43/132 (32%), Positives = 83/132 (62%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFE + + +L++V+E I +L+ + FDC +NG+ +QAMD++HV L ++ L DGF Y
Sbjct: 1 MFECKG-NAGLLRRVIECIAELIIECRFDCSENGMVVQAMDSTHVCLAAINLLRDGFLHY 59
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
C + + + + + KIL C+G DT T++ + + FE+P ++++D+E+ L++
Sbjct: 60 DCSQPLVIDIPIDKFKKILACSGPDDTFTLRF-NGGSVLLIMFETPAHDRITDFELNLLD 118
Query: 449 LDLEHLGIPETE 484
++ + + +PE E
Sbjct: 119 IEQDAMSVPELE 130
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 99.1 bits (236), Expect = 5e-20
Identities = 48/136 (35%), Positives = 79/136 (58%)
Frame = +2
Query: 92 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 271
F A+ +++ K+V+E++K + + FDC D GI +Q MDNSHVSLVSL + D FD+++
Sbjct: 4 FHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQCMDNSHVSLVSLLIETDAFDEFQ 63
Query: 272 CDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNL 451
C + I++G+NL +SKILK A D D + D + S + + + L+++
Sbjct: 64 CLKPITLGINLTHLSKILK-ALDNDCGLILDVKKVDDAVLSITSEGTNKTMKFGLNLVDI 122
Query: 452 DLEHLGIPETEYSCTI 499
+ E + IPE + I
Sbjct: 123 EAESVEIPELQSDAII 138
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 91.5 bits (217), Expect = 1e-17
Identities = 43/135 (31%), Positives = 77/135 (57%)
Frame = +2
Query: 95 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 274
EA ++ + ++ A++ LLT ATFDCD +G++L ++D V+L L LR GF +Y C
Sbjct: 2 EATFATAAAFQSIVGALRGLLTHATFDCDAHGMRLHSLDVERVALADLRLRRAGFARYAC 61
Query: 275 DRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLD 454
+R +S + + + KI++ A +TM+ D V A+E+ + + ++LD
Sbjct: 62 ERKLSFSVPVRGLVKIVRTADPSAPLTMRVAARDDRVRLAYET--ARRAVSCTLAQISLD 119
Query: 455 LEHLGIPETEYSCTI 499
+ LG+P+ EY+C +
Sbjct: 120 ADRLGVPDKEYTCVL 134
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 89.0 bits (211), Expect = 5e-17
Identities = 39/137 (28%), Positives = 81/137 (59%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
M E ++S KK+++++K L+ +F C +G+ LQAMD SHVSL+S++L AD F+ Y
Sbjct: 1 MVEIVFEQASFFKKIIDSLKGLVEDISFKCTSDGMDLQAMDISHVSLISISLPADIFNTY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
C +++ N+ ++K+LK A D + + + + +T + ++++ + + +K ++
Sbjct: 61 NCSEEMNLAFNVDVLNKVLKSASTDDYLKISTEKPNEDITIQLSTQSEDKNTRFNLKPVD 120
Query: 449 LDLEHLGIPETEYSCTI 499
++ + + IPE Y +
Sbjct: 121 INGDAVSIPEHIYKAKL 137
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 80.6 bits (190), Expect = 2e-14
Identities = 34/140 (24%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +2
Query: 83 NNMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFD 262
N +F R L+ +++K + + +K++L GI++ A+D + VSLV L L ++ F+
Sbjct: 5 NVLFHIRTLQGNVIKSLFDCLKEILHDVMLSFGPTGIRISALDGAKVSLVHLKLDSESFE 64
Query: 263 KYRCDRNISMGMNLGSMSKILKCAGDKDTVTMK-AQDNADTVTFAFESPNQEQVSDYEMK 439
+Y+C+ +G+N+ +M K+L+ AG D++ + +++ + ++ + ++ + MK
Sbjct: 65 EYKCEHTYELGVNVLNMFKLLRSAGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMK 124
Query: 440 LMNLDLEHLGIPETEYSCTI 499
L+ +D + + + E+ I
Sbjct: 125 LIEIDSVEIEVGDIEFDTII 144
>UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1;
Giardia lamblia ATCC 50803|Rep: Proliferating cell
nuclear antigen - Giardia lamblia ATCC 50803
Length = 299
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +2
Query: 92 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 271
FE + LKK+ E + L+ D+G+ ++ +DN ++L+SL L F +R
Sbjct: 8 FELTFRDAGTLKKIFETLVPLVKDTPVSITDHGLSIETIDNGRIALISLHLPTQFFKNFR 67
Query: 272 CDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDN-ADTVTFAFESPNQEQVSDYEMKLMN 448
C+R S+G+ S K++K + D VT+ + N +D + ES Q ++ ++L
Sbjct: 68 CERACSLGVRTASFLKVIKFCSNDDLVTLSQRSNSSDQLDILVESRKYSQTMNFSLRLFR 127
Query: 449 LDLEHLGIPETEYSCTI 499
D + + + E+ T+
Sbjct: 128 SDADQIDVIRPEFDSTV 144
>UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1;
Bigelowiella natans|Rep: Proliferating cell nuclear
antigen - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 258
Score = 77.8 bits (183), Expect = 1e-13
Identities = 35/124 (28%), Positives = 75/124 (60%)
Frame = +2
Query: 128 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 307
K+ E++KDLL+++TF+ +N + +Q++D+SH++L+ + ++AD F+ ++ +N
Sbjct: 14 KLFESMKDLLSESTFEFKENFLTIQSIDHSHITLLEVDIQADYFENFKEFVGTKFKINFQ 73
Query: 308 SMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPETEY 487
+ K LK + ++D+V MK + + + FE+ ++++YE+ L E + +P +Y
Sbjct: 74 GLIKALKTSTNEDSVMMKYDETTNFFSLVFEN-KDSRIAEYELNLFKSIKEKITVPVDKY 132
Query: 488 SCTI 499
TI
Sbjct: 133 DATI 136
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 75.8 bits (178), Expect = 5e-13
Identities = 32/138 (23%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
+F R ++ S++K + + +K++L + +G+++ AMD + VSLV + L A+ F++Y
Sbjct: 36 LFCIRTVQGSVIKSLFDTLKEILHDVSITFSPSGVKISAMDGAKVSLVHMKLDAEAFEEY 95
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMK-AQDNADTVTFAFESPNQEQVSDYEMKLM 445
C+ +G+N+ ++ K+L+ G +D++ + + N + ++ + + + +KL+
Sbjct: 96 VCNNTYEIGVNVTNLFKLLRTTGSRDSIMFRYLKSNPHVLEITIQNFEKNSTTQFFLKLI 155
Query: 446 NLDLEHLGIPETEYSCTI 499
+D + I + E+ I
Sbjct: 156 EIDSACIDINDLEFDAII 173
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 74.9 bits (176), Expect = 9e-13
Identities = 34/127 (26%), Positives = 68/127 (53%)
Frame = +2
Query: 116 SILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 295
S++K++LE++ +++ A + G+ +Q MD +HV+ + L + F KYRCDR + +G
Sbjct: 22 SLMKRILESLSEIVETADIKATEKGLSIQVMDVTHVAFADIFLSSTMFTKYRCDRELVIG 81
Query: 296 MNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIP 475
+ L ++ KI+K + T + + + T + + V +++KL D E IP
Sbjct: 82 VQLKTLIKIIKGMSVEGGGTFRMECDDATTNLNIRNTREGNVLSFKLKLFTSDSEAYNIP 141
Query: 476 ETEYSCT 496
E ++ +
Sbjct: 142 EFDFDAS 148
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/136 (29%), Positives = 70/136 (51%)
Frame = +2
Query: 92 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 271
F A+ S LK ++ AI L+ +ATF GI + MD SHV+L+ ++ F+KY
Sbjct: 3 FSAKTSGSDDLKAIISAISTLVEEATFVATAEGITFRGMDPSHVALIDISWPNSAFEKYE 62
Query: 272 CDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNL 451
CD NI G+ + +K++K A KD++T+ + D++ N++ Y+++L+
Sbjct: 63 CDSNIKFGVRIDEFTKLIKRADKKDSITISV--SKDSMLLIDIGSNKK----YKIRLIES 116
Query: 452 DLEHLGIPETEYSCTI 499
+P+ Y I
Sbjct: 117 SATDTPLPKISYDAKI 132
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 71.7 bits (168), Expect = 8e-12
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Frame = +2
Query: 137 EAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMS 316
E +K+++T C+ +GI L +MD SHV++V + L D F KYRCDR + +G+++ ++
Sbjct: 1 ECLKEMVTDVNLVCNASGISLDSMDGSHVAVVDVRLAVDLFHKYRCDRPVQLGLSVPNLL 60
Query: 317 KILKCAGDKDTVTMKA-------QDNADTVT-FAFESPNQEQVSDYEMKLMNLDLEHLGI 472
L+ +T+ + D DT+ E P E++L++++ E L +
Sbjct: 61 LALQPVKSAETLVHLSSLHGDDEDDEEDTILHINIEDPESGDTWSMEVRLLDVESEQLEV 120
Query: 473 PE-TEYSCT 496
PE TE+ T
Sbjct: 121 PEHTEHEAT 129
>UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PCNA
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 263
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/128 (25%), Positives = 63/128 (49%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MFEA+ KK +E I+ ++ ++ + GI +Q D S +S + LT+ + F +
Sbjct: 1 MFEAKFKNPIAFKKAMEVIETVVEFSSLEVTSEGISMQCSDTSRISFIKLTMMKEAFKSF 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
+N+S+ + + + KILK D +T+ + +N F+ + + YE KL +
Sbjct: 61 TFTKNLSLSVKMSGLCKILKTCTDASVLTIWSGENDSHDYLNFKIKTGKSLKSYEYKLYH 120
Query: 449 LDLEHLGI 472
D + G+
Sbjct: 121 FDSQDYGM 128
>UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3;
Methanobacteriaceae|Rep: DNA polymerase sliding clamp -
Methanobacterium thermoautotrophicum
Length = 244
Score = 69.7 bits (163), Expect = 3e-11
Identities = 39/133 (29%), Positives = 70/133 (52%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MF+A L +IL+ +AI ++ + G++L A+D SH++ V L L+A+ FD+Y
Sbjct: 1 MFKAELNDPNILRTSFDAISSIVDEVQIQLSAEGLRLDALDRSHITYVHLELKAELFDEY 60
Query: 269 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
CD + ++ + K+LK A D V + + + FE E V ++++L++
Sbjct: 61 VCDEPERINVDTEELMKVLKRAKANDRVILSTDEG--NLIIQFEG---EAVRTFKIRLID 115
Query: 449 LDLEHLGIPETEY 487
++ E PE EY
Sbjct: 116 IEYETPSPPEIEY 128
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/126 (27%), Positives = 64/126 (50%)
Frame = +2
Query: 122 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 301
+KK+ DL+ A + G+ +Q+MD SHVSLV+L + F Y + ++G+
Sbjct: 26 IKKLFVVFNDLVDIANLSFTNEGLSVQSMDTSHVSLVNLKIGKSYFKDYSIAQEATVGIK 85
Query: 302 LGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPET 481
+ + +IL C G+ + DN D + + + SD++MK ++++ E + IPE
Sbjct: 86 ISNFVRILDCVGNDEITISFTYDNPDELIV------KSEYSDFKMKTIDIETEEMEIPEM 139
Query: 482 EYSCTI 499
+ I
Sbjct: 140 DIDVLI 145
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 64.5 bits (150), Expect = 1e-09
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Frame = +2
Query: 125 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 304
KKV+ A +L+ + F+ D+NGI+ AMD SHV+LVS+ + D F++Y D +G++L
Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDL 70
Query: 305 GSMSKIL-KCAGDKDTV-TMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPE 478
++ KI+ + GD+ + + + N +TF + ++ Y++ NL + + P
Sbjct: 71 EALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRKFSIALYDVSSSNLKVPDIEYPN 130
Query: 479 T 481
+
Sbjct: 131 S 131
>UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 20.6 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 187
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = -1
Query: 276 SHLYLSNPSALRVSDTNDT*ELSIACSWIPLSSQSKVACVSRSLMASSTFFRIELRSRRA 97
SHLY PSA +DT+ T E+SI C P SQSKVAC SRSL S++ F+ A
Sbjct: 10 SHLYFLKPSACSCNDTSATCEVSITCMLTPRLSQSKVACGSRSLKVSTSLFKTAPVLNSA 69
Query: 96 SNMLLI*KLTKCNKIQI 46
SN+ C+ IQ+
Sbjct: 70 SNIFSSDSNCSCSLIQL 86
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = +2
Query: 119 ILKKVLEAIKDLLTQATFDCD-DNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 295
I + ++ AI ++ + F D + G +AMD SHV ++++ D F+ + D + +G
Sbjct: 10 IWRYIVSAISKVIEEGVFVVDPEEGFLFRAMDPSHVIMLNMRFPRDSFEVFEVDSKVELG 69
Query: 296 MNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIP 475
+N ++K+L+ A +D + + + N TV+FAF + + + L+++ E L P
Sbjct: 70 VNFEDVAKVLRRASKEDKLEITSDGN--TVSFAFIGKGYRK---FTLPLLDITAEELPEP 124
Query: 476 ETEYSCTI 499
+ E+ +
Sbjct: 125 QLEFKAIV 132
>UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1;
Metallosphaera sedula DSM 5348|Rep: DNA polymerase
sliding clamp - Metallosphaera sedula DSM 5348
Length = 245
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/110 (23%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +2
Query: 125 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 304
K V+EA+ L+ + TF +G+ + A+D +H+SL+ L + F+++ + G N
Sbjct: 12 KTVIEALSKLIDEVTFTFTSSGLDVVAVDRAHISLIKLHFPKEAFEEFDVEDQFRFGFNT 71
Query: 305 GSMSKILKCAGDKDTVTMKAQDNAD-TVTFAFESPNQEQVSDYEMKLMNL 451
M K++ A K+ + M++++ ++ + E P + + + E+ + L
Sbjct: 72 QYMLKVMASAKRKEKIEMESREESEIVIRMLGEPPREFTIRNIEVPIQEL 121
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 57.6 bits (133), Expect = 1e-07
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +2
Query: 128 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 307
++++ L+ +A F ++GI ++AMD S V L+ L L + F KY ++G+N+
Sbjct: 15 QLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNMD 74
Query: 308 SMSKILKCAGDKDTVTM-KAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHL 466
+ KILK KDT+ + K ++N +T + +V +++ M +DL L
Sbjct: 75 HLKKILKRGKAKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDLPEL 128
>UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6;
Sulfolobaceae|Rep: DNA polymerase sliding clamp 1 -
Sulfolobus acidocaldarius
Length = 247
Score = 55.2 bits (127), Expect = 8e-07
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Frame = +2
Query: 122 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 301
LK ++E + + + F+ +GI+L A+D +HVSL+++ L + F +Y + G N
Sbjct: 11 LKNIVETLTKFIDEGLFEIGQDGIRLVAVDKAHVSLINIELYKELFKEYEVEDEFKFGFN 70
Query: 302 LGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESP-------NQEQVSDYEMKLMNLDLE 460
++KIL A K+ +++++ D+ + V N QVS E+ +NL+ E
Sbjct: 71 SQYLAKILSIAKRKEEISIES-DSPERVKITLGGALNRVFIINNIQVSPPEVPEVNLEFE 129
>UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1;
Caldivirga maquilingensis IC-167|Rep: DNA polymerase
sliding clamp - Caldivirga maquilingensis IC-167
Length = 297
Score = 53.2 bits (122), Expect = 3e-06
Identities = 28/123 (22%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +2
Query: 131 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY-RCDRNISMGMNLG 307
+++A+ L+ ++ +G++L+A+D S ++V L + FD+Y +++I++G+N
Sbjct: 64 IMDAVAVLVEESALTVTKDGVKLRALDPSRTAMVDLYMPRTAFDEYPDVEQDINIGVNFS 123
Query: 308 SMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPETEY 487
+ KIL+ AG +VT + ++N+ + + + ++ L+++ +E L P+ +
Sbjct: 124 EVKKILQRAGKGSSVTFEVEENSLKIRM-----SGKVTRTIKLPLIDIPVEQLPTPKVIF 178
Query: 488 SCT 496
+ T
Sbjct: 179 TVT 181
>UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 248
Score = 52.0 bits (119), Expect = 7e-06
Identities = 30/118 (25%), Positives = 63/118 (53%)
Frame = +2
Query: 131 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 310
+L+AI ++ + NG++ A+D +HV+L+ + L + F +Y + + +G N+ +
Sbjct: 17 MLDAISKIVDELAMTITPNGVKAIALDPAHVALMVMELPPESFIEYEVEDEVKLGFNVAN 76
Query: 311 MSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPETE 484
++KI+K D + ++ + D VT++ + Y +L+NLD+ +PE E
Sbjct: 77 IAKIIKRGKKGDKLDIEVDE--DRVTWSIVGAT---IKRY--RLLNLDVPVPELPEAE 127
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/127 (24%), Positives = 59/127 (46%)
Frame = +2
Query: 119 ILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGM 298
I++K L + +L + G+++ AMD HVSL ++ FD Y + +G+
Sbjct: 25 IMRKALALLSELSDDVNITFAEQGMKIVAMDTGHVSLTAVKFAKGMFDVYSLGKETVIGV 84
Query: 299 NLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMNLDLEHLGIPE 478
+ ++ K+L C D T + ++ D + N ++M L++LD E + IP
Sbjct: 85 KVSNLVKVLSCV-DGPTSFVYDEETPDFFNISTTHGN------FKMGLIDLDSEEMLIPH 137
Query: 479 TEYSCTI 499
++ I
Sbjct: 138 MDFEVEI 144
>UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp
subunit A; n=1; Ignicoccus hospitalis KIN4/I|Rep: DNA
polymerase sliding clamp subunit A - Ignicoccus
hospitalis KIN4/I
Length = 248
Score = 48.8 bits (111), Expect = 7e-05
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Frame = +2
Query: 113 SSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISM 292
+ I + +++AI ++ + G++++A+D + V ++ + + AD F +Y + S+
Sbjct: 8 AKIFQSLVDAIGKIVDEVALVAKPEGVEMKAIDPAQVVMIRIYIPADAFSEYEVEEEESL 67
Query: 293 GMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFES--------PNQEQVSDYEMKLMN 448
G N+G + K K A + + ++ + E PN E VS+ L N
Sbjct: 68 GFNIGDILKFFKRAKKGYKLELGSEAEGSKIRIVLEGALIKKYVIPNLEVVSEELPDLSN 127
Query: 449 LDLE 460
LD +
Sbjct: 128 LDFK 131
>UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M697L - Chlorella virus
MT325
Length = 276
Score = 48.4 bits (110), Expect = 9e-05
Identities = 30/140 (21%), Positives = 66/140 (47%)
Frame = +2
Query: 80 INNMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGF 259
+N F+ + +KK+ + +L ++G+++Q MD SHV+L ++ + F
Sbjct: 28 MNLGFKVSCQDTDAVKKIFALLDELNDDVNLMFTEHGLKIQTMDTSHVALSTVKISKGFF 87
Query: 260 DKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMK 439
+Y + ++G+ + +M ++L C D ++D D + ++ N + +
Sbjct: 88 TEYVVPQFTTIGIKISTMIRVLGCI-DGGFSFEYSEDTPDNLIVRSDTQN------FMLN 140
Query: 440 LMNLDLEHLGIPETEYSCTI 499
++LD E + P+ EY I
Sbjct: 141 TIDLDSEEMEAPDAEYDVEI 160
>UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1;
Thermofilum pendens Hrk 5|Rep: DNA polymerase sliding
clamp - Thermofilum pendens (strain Hrk 5)
Length = 247
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/90 (22%), Positives = 48/90 (53%)
Frame = +2
Query: 125 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 304
K ++E++ ++ +A F G++L+A+D +++V L + ++ F++Y D+ + L
Sbjct: 13 KYIIESLATIVDEANFVASPEGLKLRALDPGRIAMVDLFIPSNLFEEYSVDQETKISAVL 72
Query: 305 GSMSKILKCAGDKDTVTMKAQDNADTVTFA 394
+ K+LK A D ++ + +T +
Sbjct: 73 DDIDKVLKRAKSDDKISFEVSQGRLIITLS 102
>UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 248
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/76 (26%), Positives = 45/76 (59%)
Frame = +2
Query: 134 LEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSM 313
+ AI ++ + + +NGI+L+A+D S + +V + +G +Y D+ ++G+N+ +
Sbjct: 15 MNAIGKIIDEGAYKIQENGIRLRAIDPSRIVMVDFYIPREGLLEYEFDKEETIGVNMEDL 74
Query: 314 SKILKCAGDKDTVTMK 361
+KIL+ A D + ++
Sbjct: 75 TKILRRAVKGDELELR 90
>UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5;
Thermoplasmatales|Rep: DNA polymerase sliding clamp -
Thermoplasma acidophilum
Length = 246
Score = 46.8 bits (106), Expect = 3e-04
Identities = 16/77 (20%), Positives = 45/77 (58%)
Frame = +2
Query: 122 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 301
LK++ + + ++++A F D+NG+ + A+D +HV+++ L + + F ++ D + ++
Sbjct: 11 LKEITDLLSTIVSEAKFRVDENGMSVTAVDPAHVAMIRLEVPKEAFVEFHTDGQEEIALD 70
Query: 302 LGSMSKILKCAGDKDTV 352
+ + +++ A + V
Sbjct: 71 IDRLKSVIRLASSSENV 87
>UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1;
Methanopyrus kandleri|Rep: DNA polymerase sliding clamp
- Methanopyrus kandleri
Length = 253
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/138 (22%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +2
Query: 92 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 271
F A + K A ++ +A +NGI +AMD SH+++ L + + FD+Y
Sbjct: 4 FRAYQEEARYFKYAFNAAGKVVEEAPLIVTENGIVSRAMDASHIAMAVLEMPWEMFDEYE 63
Query: 272 CDRN-ISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEMKLMN 448
+ + G+++ +++I++ A D +T++ +D + V S E+ E +L +
Sbjct: 64 PPSDELMYGLDMEEVTRIVRRARVTDEITLEGEDE-EEVIIKLGSSGYER----EFRLRS 118
Query: 449 LDLEHL-GIPETEYSCTI 499
+D++ + PE +++ +
Sbjct: 119 IDIDDIPDEPELDFAVEV 136
>UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4;
Pyrobaculum|Rep: DNA polymerase sliding clamp A -
Pyrobaculum aerophilum
Length = 249
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/80 (22%), Positives = 46/80 (57%)
Frame = +2
Query: 131 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 310
++++I L+ +A F ++G+ L+A+D S ++V L + + F+++ + G+N
Sbjct: 17 IIDSISVLVEEANFLIRNDGLYLRALDVSRTAMVDLAIPKESFEEFPEVEELRFGLNFKE 76
Query: 311 MSKILKCAGDKDTVTMKAQD 370
+ K+L+ D ++M+ ++
Sbjct: 77 LKKLLRRVKKGDKISMEFEE 96
>UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1;
Aeropyrum pernix|Rep: DNA polymerase sliding clamp B2 -
Aeropyrum pernix
Length = 249
Score = 40.7 bits (91), Expect = 0.018
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 131 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC-DRNISMGMNLG 307
++ +I+ ++ + F G+ L+A+D SHV++V L F +Y ++ G++
Sbjct: 17 MVASIEKIIEEGVFVATGEGLSLRALDTSHVAMVDLYYPNTAFIEYDIGGESVEFGVSFD 76
Query: 308 SMSKILKCAGDKDTVTMKAQ 367
+SK+L+ A +D + ++ +
Sbjct: 77 LLSKVLRRARKEDELVLEVE 96
>UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBR089W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 199
Score = 40.3 bits (90), Expect = 0.024
Identities = 35/104 (33%), Positives = 47/104 (45%)
Frame = -1
Query: 399 SNAKVTVSALS*AFIVTVSLSPAHLRIFDILPKFIPIDMFLSHLYLSNPSALRVSDTNDT 220
SN K+ S + A V VS+ RI + IP SHLY S +TN T
Sbjct: 92 SNNKMMESGVLSAISVNVSVLLPQRRILLSEVRSIPNVTGWSHLYSWKASTPISKETNRT 151
Query: 219 *ELSIACSWIPLSSQSKVACVSRSLMASSTFFRIELRSRRASNM 88
E S AC+ IP S K+ ++SL S + + S ASN+
Sbjct: 152 LESSTACAMIPSSLHWKLTNWTQSLKPSIILLKRDASSNFASNI 195
>UniRef50_Q97Z84 Cluster: DNA polymerase sliding clamp C; n=3;
Sulfolobaceae|Rep: DNA polymerase sliding clamp C -
Sulfolobus solfataricus
Length = 245
Score = 40.3 bits (90), Expect = 0.024
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 274
+A+++ + +L + D L++A F GI++ +D S V + + L + F+ +
Sbjct: 2 KAKVIDAVSFSYILRTVGDFLSEANFIVTKEGIRVSGIDPSRVVFLDIFLPSSYFEGFEV 61
Query: 275 DRNISM-GMNLGSMSKILKCAGDKDTVTMKAQDNADTVTF 391
+ + G L ++ ILK DT+ + + ++ T+TF
Sbjct: 62 SQEKEIIGFKLEDVNDILKRVLKDDTLILSSNESKLTLTF 101
>UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L823 - Mimivirus
Length = 323
Score = 37.9 bits (84), Expect = 0.13
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Frame = +2
Query: 83 NNMFEARLLRSSILKKVLEAIKDLLTQATF---DCDDNG--IQLQAMDNSHVSLVSLTLR 247
+N+ E + +LKK+L I ++ ++ F + ++ G I + DN + L+ L L+
Sbjct: 67 SNILEIVTTKIDVLKKILRLIGEVTSECQFSFQNVNEGGRIIVTELHDNKTI-LLKLVLK 125
Query: 248 ADGFDKYRCDRN-ISMGMNLGSMSKILKCAGDKDTVT 355
GFD Y+C ++ I+ + L + + L G DT T
Sbjct: 126 GTGFDFYKCSKSKITARLYLPDIDEALGLIGVDDTNT 162
>UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2;
Nanoarchaeum equitans|Rep: DNA polymerase sliding clamp
- Nanoarchaeum equitans
Length = 249
Score = 36.7 bits (81), Expect = 0.29
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 122 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
LKK++ + DL+++ F + GI+L AMD + +++V ++ + F Y
Sbjct: 11 LKKIVPIVADLISEGQFVATEEGIKLVAMDPASIAMVIWEMKPEAFIDY 59
>UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 101
Score = 36.3 bits (80), Expect = 0.39
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 210 SIACSWIP-LSSQSKVACVSRSLMASSTFFRIELRSRRASNM 88
SIA S P + S SK+A V+RSL S TF RI +RASNM
Sbjct: 50 SIAWSLKPSVGSASKLASVTRSLTESRTFLRIAPSVKRASNM 91
>UniRef50_A4VI92 Cluster: TonB-dependent siderophore receptor; n=2;
Pseudomonadaceae|Rep: TonB-dependent siderophore
receptor - Pseudomonas stutzeri (strain A1501)
Length = 753
Score = 35.1 bits (77), Expect = 0.90
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 233 SLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGD---KDTVTMKAQDNADTVTFAFES 403
S+TL +D +Y D N + N+ ++K + +D V + A T+TF F++
Sbjct: 192 SVTLGSDQTRRYTLDVNRVLSDNVAGRLNLMKHEANVAGRDGVDVSRWGVAPTITFGFDT 251
Query: 404 PNQEQVSDYEMKLMNLDLEHLGIPET 481
P + +S Y ++ D+ GIP T
Sbjct: 252 PTRATLSYYHLE--TDDMPDYGIPLT 275
>UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Putative
uncharacterized protein - Metallosphaera sedula DSM 5348
Length = 247
Score = 34.7 bits (76), Expect = 1.2
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 89 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 268
MF A S ++ +I + + T + + GI + + + V + + + D ++Y
Sbjct: 1 MFRAIYGSSRDFYYIVSSISKISDELTLNFTEEGIGSKYLTDDKVMMGVVEIGKDALEEY 60
Query: 269 RCDRNISMGMNLGSMSKIL 325
++ IS+ +NLG + KIL
Sbjct: 61 SIEKPISVKLNLGELKKIL 79
>UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 161
Score = 34.3 bits (75), Expect = 1.6
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 113 SSILKKVLEAIKDLLTQA--TFDCDDNGIQLQAMDNSHVSLVSLTLRAD 253
S L+K+ ++DLLTQA T D + + L A++ + SL SLT + D
Sbjct: 53 SETLQKLTAKVRDLLTQALPTHDMEALSVSLDALEPTQTSLSSLTAQID 101
>UniRef50_A3DBG8 Cluster: Ig-like, group 2 precursor; n=1; Clostridium
thermocellum ATCC 27405|Rep: Ig-like, group 2 precursor -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 4630
Score = 33.1 bits (72), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 281 NISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDYEM 436
++ GM LGS +K+ AGD + T+ N +V +A + P S Y++
Sbjct: 962 SLPSGMTLGSDTKVTVYAGDSYSTTVTIPKNGSSVEYAIKVPPNSAGSGYKV 1013
>UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9;
Francisella tularensis|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 279
Score = 32.7 bits (71), Expect = 4.8
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 251 DGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEQVSDY 430
D F K+R +N+ + + G+ S +L V K D A+ F + NQE++S
Sbjct: 59 DSFSKFRGFKNV-LDIGCGAGSDLL--------VVKKYNDKANLTGIDFGNWNQEKLSKN 109
Query: 431 EMKLMNLDLEHLGIP 475
+ L+NLD+E +P
Sbjct: 110 NINLINLDIEKDKLP 124
>UniRef50_Q7VD56 Cluster: Thermonuclease homolog; n=1;
Prochlorococcus marinus|Rep: Thermonuclease homolog -
Prochlorococcus marinus
Length = 121
Score = 32.3 bits (70), Expect = 6.3
Identities = 26/98 (26%), Positives = 50/98 (51%)
Frame = -1
Query: 321 IFDILPKFIPIDMFLSHLYLSNPSALRVSDTNDT*ELSIACSWIPLSSQSKVACVSRSLM 142
IF I K +P ++ L +S+PS +++ D N ++ +AC I S +S+ +S +
Sbjct: 19 IFIIPFKALPAEV----LQVSSPSIIQIGDNNRNYKVKLACINIEPSKESEALNWMKSTL 74
Query: 141 ASSTFFRIELRSRRASNMLLI*KLTKCNKIQIFHKIMS 28
+ ++ L +R+ + +L+ +L K Q K MS
Sbjct: 75 PRHS--KVNLLPQRSEDGILLAELIKLRSNQDIAKSMS 110
>UniRef50_Q5CPL9 Cluster: Signal peptide, large protein; n=2;
Cryptosporidium|Rep: Signal peptide, large protein -
Cryptosporidium parvum Iowa II
Length = 1236
Score = 32.3 bits (70), Expect = 6.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 80 INNMFEARLLRS-SILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADG 256
I N F +L + IL KVL + + L Q T D +DN + + + +L+ L+ +
Sbjct: 1066 IRNKFHDKLGKELKILSKVLNSAAEQLNQCTLDSEDNAVSKEDIIEFQNTLMKLSKKESS 1125
Query: 257 FD 262
F+
Sbjct: 1126 FN 1127
>UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5;
Methanosarcina|Rep: Geranylgeranyl reductase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 402
Score = 32.3 bits (70), Expect = 6.3
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 230 VSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPN 409
++L + FD + D+ G+++ S K+L C ++ V ++ N F +
Sbjct: 99 IALLVSRKAFDNFLLDKARETGIDIHSGEKVLDCEEGEECVEVRTSQNTYLAKFVLIAEG 158
Query: 410 QEQVSDYEMK 439
E V Y ++
Sbjct: 159 SEGVLKYSVR 168
>UniRef50_UPI00006CC466 Cluster: hypothetical protein
TTHERM_00137580; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00137580 - Tetrahymena
thermophila SB210
Length = 1219
Score = 31.9 bits (69), Expect = 8.3
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 170 FDCDDNGIQLQAMD--NSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDK 343
F D+GI+ Q + NS+ S RA + + ++ + +GS KIL +
Sbjct: 369 FHIRDSGIEKQRVQKANSNFSATRFLSRAFTSHENNSEPQVTQRIQVGSYKKILLAHQIE 428
Query: 344 DTVTMKAQDNADTVTFAFESP 406
T Q T+TF ESP
Sbjct: 429 QQKTFTPQTRQKTITFYEESP 449
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,039,475
Number of Sequences: 1657284
Number of extensions: 8085254
Number of successful extensions: 18121
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 17675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18092
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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