Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F02
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.88 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 189  VSNYRLWITLMCHWYH 236
            +S Y  WI +MC+ YH
Sbjct: 2003 LSKYLDWIAVMCYDYH 2018


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 122 LKKVLEAIKDLLTQATFDC 178
           LK+  + ++ +LTQ++F+C
Sbjct: 67  LKRFYKVVEKILTQSSFEC 85


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -3

Query: 349 SVLITSTFKDFRHTTQVHTHRYVSIASIFVKSICSESE*Y 230
           +V++TS  K  ++  ++   R  SI +  + SIC  +  Y
Sbjct: 241 NVVVTSVLKLMQNKLEITACRLFSIDNALLFSICGAASSY 280


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +2

Query: 80  INNMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVS 226
           INN+ + +LL +  +  VL      L     D  DN I    +D    S
Sbjct: 374 INNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNRILNNLLDKKPYS 422


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +2

Query: 80  INNMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVS 226
           INN+ + +LL +  +  VL      L     D  DN I    +D    S
Sbjct: 266 INNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNRILNNLLDKKPYS 314


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 213 TLMCHWYHSLSE 248
           T +  WYH+LS+
Sbjct: 60  TFLLEWYHTLSK 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,896
Number of Sequences: 336
Number of extensions: 2276
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)