Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F02
         (501 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   2.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.8  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    23   5.8  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   5.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.8  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    23   5.8  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +2

Query: 224 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNA 376
           ++ S  L  + F  YRCDR++S   + G    +L  +   +++ + ++D +
Sbjct: 119 NIPSALLFNNNFSVYRCDRSLSGSSSRGG-GVLLAVSNAYESIELPSRDRS 168


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/53 (20%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +2

Query: 134 LEAIKDLLTQATFDCDDNGIQLQAMDNSHV--SLVS-LTLRADGFDKYRCDRN 283
           +  ++    +     +++G ++ A+  + +  S+ S + L +D ++ YRCDR+
Sbjct: 14  VRGLRTKYNELRLSANESGFEMLALTETWLNESIPSNMVLDSDSYNIYRCDRS 66


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 336 PAHLRIFDILPKFIPIDMFL 277
           PAH+ I   LP+ +P D+F+
Sbjct: 585 PAHMLIPKGLPEGLPADLFI 604


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -3

Query: 316 RHTTQVH--THRYVSIASIFVKSICSESE*YQ*HMRVIH 206
           +H  +VH  ++    I       + S+ + YQ HMR IH
Sbjct: 366 KHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 188 GIQLQAMDNSHVSLVSLTLRADGFDKY 268
           G+Q+ A+   H  +V  +L  DGF  Y
Sbjct: 913 GVQMDALQMFHNIIVFRSLFLDGFKMY 939


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 188 GIQLQAMDNSHVSLVSLTLRADGFDKY 268
           G+Q+ A+   H  +V  +L  DGF  Y
Sbjct: 914 GVQMDALQMFHNIIVFRSLFLDGFKMY 940


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 336 PAHLRIFDILPKFIPIDMFL 277
           PAH+ I   LP+ +P D+F+
Sbjct: 585 PAHMLIPKGLPEGLPADLFI 604


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,185
Number of Sequences: 2352
Number of extensions: 9242
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)