Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_F02
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   1.8  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   1.8  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   7.2  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.5  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 335 GDKDTVTMKAQDNADTVTFAFESPNQE 415
           GD+ T T  + DN  T TF    P +E
Sbjct: 43  GDEWTFTSSSGDNTYTKTFKMNVPFEE 69


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 335 GDKDTVTMKAQDNADTVTFAFESPNQE 415
           GD+ T T  + DN  T TF    P +E
Sbjct: 45  GDEWTFTSSSGDNTYTKTFKMNVPFEE 71


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 303 KFIPIDMFLSHLYLSNPSALRVSDTND 223
           KFI + +F +  Y+S  + L   DT D
Sbjct: 2   KFIVLVLFCAVAYVSAQAELEPEDTMD 28


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 19  FSVGHYFVKY 48
           F+V HYF KY
Sbjct: 294 FAVVHYFTKY 303


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 352 HSVLITSTFKDFRHTTQVHTHRYVSIASIF 263
           +SVL  S   + RH+  V   +Y  +  +F
Sbjct: 385 YSVLPISVANELRHSRPVPAKKYDCVTLLF 414


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 352 HSVLITSTFKDFRHTTQVHTHRYVSIASIF 263
           +SVL  S   + RH+  V   +Y  +  +F
Sbjct: 385 YSVLPISVANELRHSRPVPAKKYDCVTLLF 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,950
Number of Sequences: 438
Number of extensions: 2542
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)