Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_F01
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 264 1e-69
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 242 4e-63
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 232 4e-60
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 216 4e-55
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 212 5e-54
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 169 6e-41
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 167 1e-40
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 3e-35
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 133 3e-30
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 130 3e-29
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 2e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 3e-27
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 122 6e-27
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 119 4e-26
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 119 6e-26
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 116 4e-25
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 111 9e-24
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 110 3e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 4e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 108 1e-22
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 107 1e-22
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 104 1e-21
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 102 7e-21
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 100 5e-20
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 100 5e-20
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 95 8e-19
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 92 1e-17
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 91 2e-17
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 9e-17
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 86 5e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 1e-15
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 80 3e-14
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 1e-12
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 70 5e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 67 3e-10
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 5e-07
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 54 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 6e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 50 3e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 3e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 50 4e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 50 5e-05
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 49 7e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 46 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 7e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 9e-04
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.006
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.019
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.019
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.23
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.23
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 38 0.23
UniRef50_A1UC96 Cluster: Putative uncharacterized protein precur... 37 0.31
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 37 0.41
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.41
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.41
UniRef50_Q914N0 Cluster: ORF1; n=8; Torque teno virus|Rep: ORF1 ... 36 0.54
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.54
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.71
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.71
UniRef50_A1HHU1 Cluster: Alpha/beta hydrolase fold; n=2; Ralston... 36 0.94
UniRef50_Q9VX67 Cluster: CG5172-PA, isoform A; n=2; Drosophila m... 36 0.94
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q4S5H3 Cluster: Chromosome 3 SCAF14730, whole genome sh... 35 1.6
UniRef50_Q67JQ6 Cluster: Conserved domain protein , histidine-an... 35 1.6
UniRef50_A3B157 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.6
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.6
UniRef50_Q09AC7 Cluster: Protein kinase; n=2; Stigmatella aurant... 34 2.2
UniRef50_Q1DQY6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q1D3Q7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 3.8
UniRef50_UPI00006609DD Cluster: UPI00006609DD related cluster; n... 33 3.8
UniRef50_Q092V8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 3.8
UniRef50_Q3C0Y0 Cluster: Translation elongation factor 2; n=2; H... 33 3.8
UniRef50_UPI0000EBEDED Cluster: PREDICTED: hypothetical protein;... 33 5.0
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 5.0
UniRef50_Q27920 Cluster: PC4-1 protein; n=3; Bradysia hygida|Rep... 33 5.0
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.0
UniRef50_A0DNJ2 Cluster: Chromosome undetermined scaffold_58, wh... 33 5.0
UniRef50_UPI0000DC17AA Cluster: SET domain containing 1B; n=1; R... 33 6.6
UniRef50_UPI0000DC17A8 Cluster: SET domain containing 1B; n=2; E... 33 6.6
UniRef50_Q8V7H8 Cluster: ORF1; n=17; root|Rep: ORF1 - Torque ten... 33 6.6
UniRef50_Q09AA1 Cluster: Putative uncharacterized protein; n=3; ... 33 6.6
UniRef50_Q7S953 Cluster: Putative uncharacterized protein NCU072... 33 6.6
UniRef50_Q99AR3 Cluster: Orf1; n=24; Torque teno virus|Rep: Orf1... 32 8.7
UniRef50_A7K920 Cluster: Putative uncharacterized protein z410R;... 32 8.7
UniRef50_Q2SLJ4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_A3AZI6 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 8.7
UniRef50_Q173Y5 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_A7SY14 Cluster: Predicted protein; n=2; Nematostella ve... 32 8.7
UniRef50_Q9UPS6 Cluster: SET domain-containing protein 1B; n=18;... 32 8.7
UniRef50_A1CMU5 Cluster: Mpv17 / PMP22 family protein; n=1; Aspe... 32 8.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 264 bits (646), Expect = 1e-69
Identities = 124/143 (86%), Positives = 132/143 (92%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 341 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 520
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 521 IGKPHTVPCKVTGKCGSVTVRLI 589
IGKPHTVPCKVTG+CGSV VRLI
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLI 196
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 242 bits (593), Expect = 4e-63
Identities = 105/143 (73%), Positives = 131/143 (91%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 341 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 520
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 521 IGKPHTVPCKVTGKCGSVTVRLI 589
+G PHTVP KV+GKCGSVTVRL+
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLV 169
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 232 bits (568), Expect = 4e-60
Identities = 111/136 (81%), Positives = 118/136 (86%)
Frame = +2
Query: 182 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 361
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 362 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 541
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 542 PCKVTGKCGSVTVRLI 589
PCKVTG+C SV V LI
Sbjct: 121 PCKVTGRCSSVLVHLI 136
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 216 bits (527), Expect = 4e-55
Identities = 98/142 (69%), Positives = 120/142 (84%)
Frame = +2
Query: 164 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 343
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 344 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 523
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 524 GKPHTVPCKVTGKCGSVTVRLI 589
G+PHT+P KV GKCGSV VRLI
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLI 186
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 212 bits (518), Expect = 5e-54
Identities = 97/141 (68%), Positives = 117/141 (82%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 346
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 347 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 526
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 527 KPHTVPCKVTGKCGSVTVRLI 589
+PH++ K TGKCGSVTVRLI
Sbjct: 150 QPHSLATKTTGKCGSVTVRLI 170
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 169 bits (410), Expect = 6e-41
Identities = 80/93 (86%), Positives = 85/93 (91%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 491 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLI 589
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LI
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLI 140
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 167 bits (407), Expect = 1e-40
Identities = 78/143 (54%), Positives = 101/143 (70%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 341 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 520
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 521 IGKPHTVPCKVTGKCGSVTVRLI 589
GKPHTV CK +GKCG+ V++I
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVI 157
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 3e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 341 KQTRAGQRTRFKAFVAIGDNNGHIGL 418
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 133 bits (322), Expect = 3e-30
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +2
Query: 362 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 541
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 542 PCKVTGKCGSVTVRLI 589
P KVTG+CGSV VRLI
Sbjct: 121 PGKVTGRCGSVLVRLI 136
Score = 33.5 bits (73), Expect = 3.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKI 226
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 130 bits (313), Expect = 3e-29
Identities = 77/135 (57%), Positives = 92/135 (68%)
Frame = +2
Query: 185 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 364
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 365 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 544
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 545 CKVTGKCGSVTVRLI 589
CKVTG GSV++ LI
Sbjct: 161 CKVTGH-GSVSLHLI 174
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 2e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 341 KQTRAGQRTRFK 376
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 3e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +2
Query: 170 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 349
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 350 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 457
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 122 bits (294), Expect = 6e-27
Identities = 63/141 (44%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Frame = +2
Query: 173 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 352
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 353 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 526
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 527 KPHTVPCKVTGKCGSVTVRLI 589
+PH++P KV GK GSV V L+
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLL 150
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 119 bits (287), Expect = 4e-26
Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Frame = +2
Query: 173 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 352
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 353 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 526
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++R G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 527 KPHTVPCKVTGKCGSVTVRL 586
KPHT+P V GK GSV+V L
Sbjct: 122 KPHTLPFLVNGKSGSVSVTL 141
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 119 bits (286), Expect = 6e-26
Identities = 62/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 341 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWG 514
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 515 NKIGKPHTVPCKVTGKCGSVTVRLI 589
G PH++P G CGSV V L+
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELL 153
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 116 bits (279), Expect = 4e-25
Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 343
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 344 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGN 517
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 518 KIGKPHTVPCKVTGKCGSVTVRLI 589
+ +PH+VP V GK GSV VRLI
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLI 157
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 111 bits (268), Expect = 9e-24
Identities = 56/131 (42%), Positives = 79/131 (60%)
Frame = -2
Query: 553 DLARHCVRLSDFVTPITSANR*NRQFGEYDGTTDSSCHFLAALHTQTNVSIVITDSNKXX 374
+LA H V +D VTP+ S +R N Q G+ D TD HFLAAL QT+V++ +TD ++
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 373 XXXXXXXXXXXXXRHDLQDFIVE*RAKEEIDDLKLFDGKRE*VNALKLVDFAFTDKATKL 194
HDLQ F+++ A+EEIDDL+LF+G+R V+ L+ D A +AT+L
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 193 GDWHPLFLVFL 161
G W+P VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 110 bits (264), Expect = 3e-23
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Frame = +2
Query: 179 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 358
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 359 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 532
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 533 HTVPCKVTGKCGSVTVRL 586
HTV + GK GSV V L
Sbjct: 126 HTVALRTEGKAGSVEVEL 143
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 4e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 341 KQTRAGQRTRFK 376
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +2
Query: 221 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 400
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 401 NGHIG 415
NG+ G
Sbjct: 62 NGYAG 66
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1
Query: 424 EVQQGSGNCYPWCHHTRQIVCSTCSQRLLG*QNRKASHSALQGHR 558
EV QG G +P HH Q + +QRLLG Q+R+A H LQG R
Sbjct: 69 EVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDR 113
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 108 bits (259), Expect = 1e-22
Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 346
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 347 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 520
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 521 IGKPHTVPCKVTGKCGSVTVRLI 589
+ H+VP KV GK GSVT+ +I
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEII 183
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 107 bits (258), Expect = 1e-22
Identities = 64/140 (45%), Positives = 85/140 (60%)
Frame = +2
Query: 170 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 349
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPLIKQT 100
Query: 350 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 529
Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATGGKRL-E 152
Query: 530 PHTVPCKVTGKCGSVTVRLI 589
PH VPC+VTG+CGS+ V LI
Sbjct: 153 PHMVPCRVTGRCGSLLVHLI 172
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 104 bits (250), Expect = 1e-21
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Frame = +2
Query: 179 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 358
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 359 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 532
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V R G W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 533 HTVPCKVTGKCGSVTVRL 586
+++ K GK GSVTV +
Sbjct: 177 NSLTRKAEGKAGSVTVEI 194
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 102 bits (244), Expect = 7e-21
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Frame = +2
Query: 206 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 385
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 386 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 559
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 560 KCGSVTVRLI 589
+ GS V L+
Sbjct: 120 RSGSTRVTLM 129
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 99.5 bits (237), Expect = 5e-20
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 15/153 (9%)
Frame = +2
Query: 173 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 337
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 338 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 493
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 494 VRR--GYWGNKIGKPHTVPCKVTGKCGSVTVRL 586
V R G W G PH++P +V GK GSV V L
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVIL 156
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 99.5 bits (237), Expect = 5e-20
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 346
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 347 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 520
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 521 IGKPHTVPCKVTGKCGSVTVRLI 589
+ H+VP KV GK GSV + ++
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEIL 164
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 95.5 bits (227), Expect = 8e-19
Identities = 65/127 (51%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 182 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 361
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 362 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 538
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 539 VPCKVTG 559
PCK TG
Sbjct: 108 YPCKRTG 114
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 91.9 bits (218), Expect = 1e-17
Identities = 61/132 (46%), Positives = 73/132 (55%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 340
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 341 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 520
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 521 IGKPHTVPCKVT 556
IG PHT+PC VT
Sbjct: 126 IGNPHTIPCDVT 137
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 90.6 bits (215), Expect = 2e-17
Identities = 42/116 (36%), Positives = 73/116 (62%)
Frame = +2
Query: 233 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 412
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 413 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 580
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVV 199
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 9e-17
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2
Query: 209 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 388
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 389 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 487
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 86.2 bits (204), Expect = 5e-16
Identities = 50/102 (49%), Positives = 63/102 (61%)
Frame = +2
Query: 284 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 463
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 464 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLI 589
IIL + S+ G+ GNKI KPHTV C+VT SV V I
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHI 96
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +2
Query: 185 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 364
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 365 TRFKAFVAIGDNNGHIGL 418
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 80.2 bits (189), Expect = 3e-14
Identities = 64/141 (45%), Positives = 78/141 (55%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 346
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 347 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 526
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 527 KPHTVPCKVTGKCGSVTVRLI 589
TV CKVTG+C SV + LI
Sbjct: 160 S-LTVSCKVTGQCVSVLICLI 179
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +2
Query: 221 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 400
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 401 NGHIGLGVKCSKEVATAIRGAIIL 472
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 69.7 bits (163), Expect = 5e-11
Identities = 38/84 (45%), Positives = 48/84 (57%)
Frame = +2
Query: 338 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 517
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 518 KIGKPHTVPCKVTGKCGSVTVRLI 589
++ + V KVT GSV V LI
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLI 75
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Frame = -2
Query: 589 DQSNCD*TTLSCDLARHCVRLSDFVTPITSANR*NRQFGEYDGTTDSSCHFLAALHTQTN 410
+QSN + TTL+ L VRL+ TP+TS++ N Q G+ D +D + +FL+ L+TQT+
Sbjct: 87 NQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTD 146
Query: 409 VSIVITDSNKXXXXXXXXXXXXXXXRHDLQDFIVE*RAKEEIDDLKLFDGKRE*VNALKL 230
V++ +T+ + R D+ +FI++ ++ ++DL+ D +R +
Sbjct: 147 VTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDG 205
Query: 229 VDFAFTDKATKLGDWHP--LFLV 167
D A ++T+LG+W+P FLV
Sbjct: 206 RDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 268
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 296 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 475
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 476 KLSVL--PVRRGY 508
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 5e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 179 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 292
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/90 (34%), Positives = 49/90 (54%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 491 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 580
+ K +T+P ++ GK G+ T+
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTL 92
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 484
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 485 VLPV 496
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 302 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 481
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 482 SVLPVRR 502
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +2
Query: 284 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 463
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 464 IILAKLSVLPV 496
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 50.4 bits (115), Expect = 3e-05
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +2
Query: 179 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 358
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 359 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 529
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 530 PHTVPCKVTGKCGSVTVRLI 589
P P ++ S+ LI
Sbjct: 141 PSVCPMQIRDYHSSMLACLI 160
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 299 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 478
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 479 LSVLPV 496
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 50.0 bits (114), Expect = 4e-05
Identities = 30/89 (33%), Positives = 48/89 (53%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 484
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 485 VLPVRRGYWGNKIGKPHTVPCKVTGKCGS 571
+ V K+ K T+ +V GK G+
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGA 159
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 49.6 bits (113), Expect = 5e-05
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = -3
Query: 327 IFRTSSLSEGPRKKSMISNSLMGRENR*MLSSLSILPSRTRRPSLVTGTHSFWS 166
+F TSS G K SMI NSL G+E + + S + ILP+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 49.2 bits (112), Expect = 7e-05
Identities = 32/93 (34%), Positives = 48/93 (51%)
Frame = +2
Query: 308 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 487
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 488 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRL 586
+ + K HT+P +V GK S V L
Sbjct: 91 VKIN--------FKGHTIPHEVIGKFKSARVIL 115
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 491 PV 496
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 290 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 469
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 470 LAKLSVLPV 496
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 491 --PVRRG 505
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 491 PV 496
V
Sbjct: 209 QV 210
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/92 (26%), Positives = 51/92 (55%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 491 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRL 586
V + K +++P ++G G+ V L
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFL 152
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 463
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 9e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 491 PV 496
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 296 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 475
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 476 KLSVL--PVRRG 505
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 296 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 475
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 476 KLSVLPVRR 502
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 484
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 485 VLPVRRG 505
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2
Query: 512 GNKIGKPHTVPCKVTGKCGSVTVRLI 589
GNKIGK H V CKVTG CGSV V LI
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLI 32
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 484
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 485 VLPV 496
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 491 PV 496
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.019
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 491 PV 496
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.019
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 478
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 335 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 502
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.23
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 457
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.23
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 484
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 485 VLPVRR 502
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.5 bits (83), Expect = 0.23
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 484
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 485 VLPVRRGYWGNKIGKPHTV 541
++ + G+ I PH V
Sbjct: 73 LITI-ESLEGDSI--PHEV 88
>UniRef50_A1UC96 Cluster: Putative uncharacterized protein
precursor; n=2; Mycobacterium|Rep: Putative
uncharacterized protein precursor - Mycobacterium sp.
(strain KMS)
Length = 130
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 58 TWRFPRRLWIPWWRQRSW----RPTWSWSRTRARPWPWQGRP 171
+WR R W WWR W RP W W P W+G P
Sbjct: 55 SWRGDDRDWDKWWRDNRWRNDDRPPWGWG--PPPPLHWRGHP 94
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 36.7 bits (81), Expect = 0.41
Identities = 30/96 (31%), Positives = 46/96 (47%)
Frame = +2
Query: 302 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 481
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 482 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLI 589
++ PV R Y + T+ V GK G+V ++L+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLM 342
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.41
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 305 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 484
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 485 VLPV 496
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.41
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 311 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 491 PV 496
V
Sbjct: 151 RV 152
>UniRef50_Q914N0 Cluster: ORF1; n=8; Torque teno virus|Rep: ORF1 -
Torque teno virus
Length = 719
Score = 36.3 bits (80), Expect = 0.54
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 91 WWRQRSWRP--TWSWSRTRARP 150
WWR+R WRP W W R R RP
Sbjct: 3 WWRRRFWRPKRRWRWRRRRRRP 24
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 36.3 bits (80), Expect = 0.54
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 335 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 514
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 515 NKIGKPHTVPCKVTGKCGSVTVRL 586
N+ T+ +VT K VRL
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRL 399
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.71
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 308 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 457
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.71
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 317 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 496
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_A1HHU1 Cluster: Alpha/beta hydrolase fold; n=2; Ralstonia
pickettii|Rep: Alpha/beta hydrolase fold - Ralstonia
pickettii 12J
Length = 342
Score = 35.5 bits (78), Expect = 0.94
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 61 WRFPRRLWIPWWRQRSWRPTWSWSRTRARPWPW 159
W+ + W + W P WSW AR WPW
Sbjct: 177 WKQRLQSWYVGYFHLPWVPEWSWRLWAARAWPW 209
>UniRef50_Q9VX67 Cluster: CG5172-PA, isoform A; n=2; Drosophila
melanogaster|Rep: CG5172-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 133
Score = 35.5 bits (78), Expect = 0.94
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +1
Query: 55 WTWR-FPRRLWIP---WWRQRSWRPTWSWSRTRARPW 153
WTWR +PRRL WW +R WR W R R W
Sbjct: 78 WTWRRWPRRLAEERRRWWTRRLWRWQSRWPRRTRRLW 114
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 302 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 481
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 482 SVLPVRR 502
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q4S5H3 Cluster: Chromosome 3 SCAF14730, whole genome
shotgun sequence; n=2; Deuterostomia|Rep: Chromosome 3
SCAF14730, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 745
Score = 34.7 bits (76), Expect = 1.6
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 167 LPCHGHGRARVRDHDHVGRHDLCRHHGIQSR-RGNRHVHRLELRPP 33
L C G G VRD+ H RHH ++R G H+HR E+ PP
Sbjct: 457 LLCAGRGDGGVRDYV-AWTHTPERHHAARTRPSGQLHIHRGEINPP 501
>UniRef50_Q67JQ6 Cluster: Conserved domain protein , histidine-and
aspartate-rich; n=1; Symbiobacterium thermophilum|Rep:
Conserved domain protein , histidine-and aspartate-rich
- Symbiobacterium thermophilum
Length = 169
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 158 HGHGRARVR-DHDHVGRHD-LCRHHGIQSRRGNRHVHRLELR 39
HGHG R DHDH G HD HHG G+ H HR R
Sbjct: 64 HGHGHHDHRGDHDHHGHHDHHHNHHG--GHDGHHHRHRRRQR 103
>UniRef50_A3B157 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 220
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 91 WWRQRSWRPTWS--WSRTRAR-PWPWQGRP 171
WW + WR TW W+ AR PWPW+ RP
Sbjct: 125 WWGR--WRRTWRRRWAPWSARWPWPWRKRP 152
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 293 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 472
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 473 AKLSVL 490
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 290 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 454
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q09AC7 Cluster: Protein kinase; n=2; Stigmatella
aurantiaca DW4/3-1|Rep: Protein kinase - Stigmatella
aurantiaca DW4/3-1
Length = 517
Score = 34.3 bits (75), Expect = 2.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 121 WSWSRTRARPWPWQGRPERVGASHQA 198
W W R+ RPW WQG P S A
Sbjct: 395 WLWIRSEVRPWVWQGAPSGQEGSRDA 420
>UniRef50_Q1DQY6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 407
Score = 34.3 bits (75), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 82 WIPWWRQRSWRPTWSWSRTRARPWPWQGR 168
WIP W+ W W W WPWQ R
Sbjct: 384 WIPGWKDPKWPWKWKWK------WPWQSR 406
>UniRef50_Q1D3Q7 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 102
Score = 33.9 bits (74), Expect = 2.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 418 GCEVQQGSGNCYPWCHHTRQIVCSTCSQR 504
GCE + G+G + WC H +C C +R
Sbjct: 7 GCERRGGAGEVFDWCAHCELSLCPRCMER 35
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 3.8
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 227 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 400
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 401 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 490
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_UPI00006609DD Cluster: UPI00006609DD related cluster; n=1;
Takifugu rubripes|Rep: UPI00006609DD UniRef100 entry -
Takifugu rubripes
Length = 150
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +1
Query: 61 WRFPRRLWIPWWRQRSWR--PTWSWSRTRARPWPWQGRPERVG 183
W R + PWW WR WS + R PW W R G
Sbjct: 34 WSSNHRRFAPWWSSNHWRFGTWWSSNDRRFGPW-WSSNHRRFG 75
>UniRef50_Q092V8 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 522
Score = 33.5 bits (73), Expect = 3.8
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +1
Query: 91 WWRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWSPC 210
WWR S RP W S ARP P R AS + SPC
Sbjct: 467 WWRTSSPRPPWR-SCWAARPSATCATPPRAAASSRMPSPC 505
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 61 WRFPRRLWIPWWRQRSWRPTWSWSRTRARPWPWQ 162
WR RR W WR+R R + W R R R W W+
Sbjct: 66 WRRRRRRW---WRRRRRRSSRRWCRLRRRCWFWR 96
>UniRef50_Q3C0Y0 Cluster: Translation elongation factor 2; n=2;
Halorubrum|Rep: Translation elongation factor 2 -
Halorubrum sp. TP071
Length = 161
Score = 33.5 bits (73), Expect = 3.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 97 RQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWSPCP 213
R SW PT W+RTRAR P R + SP P
Sbjct: 79 RSSSWSPTSRWTRTRARSRRAASSPARWRRARSCTSPAP 117
>UniRef50_UPI0000EBEDED Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 170
Score = 33.1 bits (72), Expect = 5.0
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 73 RRLWIPWWRQRSWRPTW-SWSRTRARPWPWQGRPERV--GASHQAWSPCP 213
RR PW ++R WR W R R R PWQ R R Q W P P
Sbjct: 120 RRHRRPWRQRRQWRRRWRRRQRRRLRRRPWQRRWRRPPWRRRKQRWRPRP 169
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 374 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 526
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q27920 Cluster: PC4-1 protein; n=3; Bradysia hygida|Rep:
PC4-1 protein - Bradysia hygida
Length = 450
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 158 HGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHR 51
HGHG H H H H G + GNRH HR
Sbjct: 79 HGHGHGHGHGHGHGNNH----HGGRKHEHGNRHQHR 110
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 317 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 463
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_A0DNJ2 Cluster: Chromosome undetermined scaffold_58, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_58, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 3634
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = +1
Query: 334 CTETDACRSAYAFQGVC--CYR**QWTHWFGCEVQQGSGNCYPWCHHTRQIVCSTCSQRL 507
C +T +S Y QG+C C + C+ QQ +C P ++ Q TC
Sbjct: 954 CWQTQCPQSTYEEQGICLECDK-----DCMTCDAQQPCISCLPGYYYFNQKCYQTCPDGY 1008
Query: 508 LG*QNRKASHSALQGHRKVW 567
G QN Q R W
Sbjct: 1009 FGDQNTNQCSQCKQNCRVCW 1028
>UniRef50_UPI0000DC17AA Cluster: SET domain containing 1B; n=1;
Rattus norvegicus|Rep: SET domain containing 1B - Rattus
norvegicus
Length = 808
Score = 32.7 bits (71), Expect = 6.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 525 PILLPQ*PLRTGRTDNLASMMAPRIAVATSLLHFTPKPM-CPLLSPI 388
P+LLP PL TGR D A +A + + T L P P+ PL P+
Sbjct: 379 PLLLPVCPLPTGRRDERAGPLASPVLLETGLPLPLPLPLPLPLALPV 425
>UniRef50_UPI0000DC17A8 Cluster: SET domain containing 1B; n=2;
Eutheria|Rep: SET domain containing 1B - Rattus
norvegicus
Length = 1552
Score = 32.7 bits (71), Expect = 6.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 525 PILLPQ*PLRTGRTDNLASMMAPRIAVATSLLHFTPKPM-CPLLSPI 388
P+LLP PL TGR D A +A + + T L P P+ PL P+
Sbjct: 1093 PLLLPVCPLPTGRRDERAGPLASPVLLETGLPLPLPLPLPLPLALPV 1139
>UniRef50_Q8V7H8 Cluster: ORF1; n=17; root|Rep: ORF1 - Torque teno
virus
Length = 746
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 61 WRFPRRLWIPW----WRQRSWRPTWSWSRTRARPWPWQGRPER 177
WR+ RR W W W R+ RP ++ R RAR + +GR R
Sbjct: 4 WRYRRRPWRRWRRRRWGLRTRRPRRTFRRRRARRYVSRGRRRR 46
>UniRef50_Q09AA1 Cluster: Putative uncharacterized protein; n=3;
Cystobacterineae|Rep: Putative uncharacterized protein -
Stigmatella aurantiaca DW4/3-1
Length = 502
Score = 32.7 bits (71), Expect = 6.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 70 PRRLWIPWWRQRSWRPTWSWSRTRARPWPWQGRPE---RVGASHQAWSP 207
P + P R+ SW +W + PWPW G P + + +WSP
Sbjct: 2 PAAMSSPGRRRSSWTARAAWCWETSAPWPWWGSPTWWWWMPGTRCSWSP 50
>UniRef50_Q7S953 Cluster: Putative uncharacterized protein
NCU07262.1; n=3; Pezizomycotina|Rep: Putative
uncharacterized protein NCU07262.1 - Neurospora crassa
Length = 604
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 158 HGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVH 54
HGH + DH H +HD HG S G+ H H
Sbjct: 396 HGHSHSHSHDHKHDHKHDHGHSHG-HSHGGHSHSH 429
>UniRef50_Q99AR3 Cluster: Orf1; n=24; Torque teno virus|Rep: Orf1 -
Torque teno virus
Length = 772
Score = 32.3 bits (70), Expect = 8.7
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 61 WRFPRRLWIPWWRQRSWRPTWSWSRTRARP---WPW-QGRPERVGASHQAW 201
WR R W PWWR+R R W R R RP P+ + RP RV W
Sbjct: 3 WR--RWRWRPWWRRRRRR---RWRRRRRRPRRRRPYRRRRPRRVRRRRGRW 48
>UniRef50_A7K920 Cluster: Putative uncharacterized protein z410R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z410R - Chlorella virus ATCV-1
Length = 129
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +1
Query: 4 RGLLHXXXXXXXXXXXXWTWRFPRRLWIPWWRQR-----SWRPTWSWSRTR 141
RG H W W + RR W+ W +R W +W WSR R
Sbjct: 73 RGSWHWHRRWLWHWHRRWLWHWHRR-WLWHWHRRWLWHWHWHGSWRWSRKR 122
>UniRef50_Q2SLJ4 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 101
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 152 HGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHR 51
H R +H + G HD RH G + NRH HR
Sbjct: 30 HDGKRYDNHHNHGHHDKHRHRGGHHKHHNRHHHR 63
>UniRef50_A3AZI6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 363
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 55 WTWRFPRRLWIPWWRQRSWRP 117
W WR P RL W R RSW P
Sbjct: 140 WLWRRPSRLLSKWRRGRSWAP 160
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 8.7
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 314 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 475
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_Q173Y5 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 381
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 164 PCHGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRH-VHRLELRPPLLNDQCSRPR 3
P HGHG R +H H H HHG + G+ H H P +N + P+
Sbjct: 35 PDHGHGHGRGHEHGHGHGHG-PHHHG--HKHGHHHGRHHWHRHVPFVNFEVHEPK 86
>UniRef50_A7SY14 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 520
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 158 HGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHRLELRPPLLNDQCS 12
H H R H H H HH +Q R + H H L PL+ ++C+
Sbjct: 254 HHHHRHHHHHHHHHHHHHHHHHHHLQHNRHHHHHHHRHL--PLVLEKCA 300
>UniRef50_Q9UPS6 Cluster: SET domain-containing protein 1B; n=18;
Mammalia|Rep: SET domain-containing protein 1B - Homo
sapiens (Human)
Length = 804
Score = 32.3 bits (70), Expect = 8.7
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = -3
Query: 525 PILLPQ*PLRTGRTDNLASMMAPRIAVATSLLHFTPKPMCPLLSPIATNALKRVR 361
P+LLP PL TGR D + +A + + T L P P+ PL P+A A+ R +
Sbjct: 280 PLLLPVCPLPTGRRDERSGPLASPVLLETGLP--LPLPL-PLPLPLALPAVLRAQ 331
>UniRef50_A1CMU5 Cluster: Mpv17 / PMP22 family protein; n=1;
Aspergillus clavatus|Rep: Mpv17 / PMP22 family protein -
Aspergillus clavatus
Length = 280
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 67 FPRRLWIPWWRQRSWRPTWSWSRTRARPWPWQGRPERVGASH 192
FPRRL W R+ +W+ W W PW WQ + + + H
Sbjct: 73 FPRRLRWRWRRKWNWK--WKW------PWQWQWQSDLASSIH 106
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,980,195
Number of Sequences: 1657284
Number of extensions: 11281289
Number of successful extensions: 35808
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 33206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35413
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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