Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E24
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   305   3e-83
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   305   3e-83
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   305   3e-83
D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   299   2e-81
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    28   7.2  
AE013599-1564|AAM68647.1|  737|Drosophila melanogaster CG8772-PB...    28   9.5  

>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  305 bits (748), Expect = 3e-83
 Identities = 138/175 (78%), Positives = 155/175 (88%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRTRLKYALTGNE 200
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLR RLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
           V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120

Query: 381 YKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISSNKIMDFIKF 545
           YKLC V++   G K VP+LVTHDGRT+RYPDPLI+ NDSVQ+DI+S KI D+IKF
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKF 175


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  305 bits (748), Expect = 3e-83
 Identities = 138/175 (78%), Positives = 155/175 (88%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRTRLKYALTGNE 200
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLR RLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
           V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120

Query: 381 YKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISSNKIMDFIKF 545
           YKLC V++   G K VP+LVTHDGRT+RYPDPLI+ NDSVQ+DI+S KI D+IKF
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKF 175


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  305 bits (748), Expect = 3e-83
 Identities = 138/175 (78%), Positives = 155/175 (88%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRTRLKYALTGNE 200
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLR RLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
           V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120

Query: 381 YKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISSNKIMDFIKF 545
           YKLC V++   G K VP+LVTHDGRT+RYPDPLI+ NDSVQ+DI+S KI D+IKF
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKF 175


>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  299 bits (734), Expect = 2e-81
 Identities = 136/175 (77%), Positives = 153/175 (87%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRTRLKYALTGNE 200
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLR RLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60

Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
           V KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61  VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120

Query: 381 YKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISSNKIMDFIKF 545
           YKLC V++   G K VP+LVTHDGRT+RYPDPLI+ NDSVQ+DI+S KI D+IKF
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKF 175


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
           protein.
          Length = 1998

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 461 PVPGPAHQCERLGAARHLQQQDHGLHQ 541
           P P PAH  + L AA H QQQ    +Q
Sbjct: 437 PSPIPAHITKELSAAHHAQQQQQQQNQ 463


>AE013599-1564|AAM68647.1|  737|Drosophila melanogaster CG8772-PB,
           isoform B protein.
          Length = 737

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 183 ALTGNEVLKIVKQRLIKV-DGKVRTDPTYP 269
           ++TG E++++VKQ   KV + KV   PT P
Sbjct: 45  SMTGEELIELVKQNAAKVEEEKVEIPPTEP 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,143,257
Number of Sequences: 53049
Number of extensions: 578796
Number of successful extensions: 1778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)