Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E20
         (398 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009818-1|AAP88820.1|  682|Homo sapiens glutamine-fructose-6-ph...    29   7.5  
BC000012-1|AAH00012.1|  682|Homo sapiens glutamine-fructose-6-ph...    29   7.5  
AB016789-1|BAA74731.1|  682|Homo sapiens Glutamine:fructose-6-ph...    29   7.5  
DQ333316-1|ABD24032.1| 2881|Homo sapiens PRIC320 isoform 1 protein.    28   9.9  
AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.                28   9.9  
AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling fa...    28   9.9  
AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein.             28   9.9  

>BT009818-1|AAP88820.1|  682|Homo sapiens
           glutamine-fructose-6-phosphate transaminase 2 protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 200 LGDWFVVEYYASAEEALSYSCMRAVFTQDDHVAG-ADGTVECH 325
           +GD  V  ++AS   A+     R +F +DD +A  ADG +  H
Sbjct: 251 VGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIH 293


>BC000012-1|AAH00012.1|  682|Homo sapiens
           glutamine-fructose-6-phosphate transaminase 2 protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 200 LGDWFVVEYYASAEEALSYSCMRAVFTQDDHVAG-ADGTVECH 325
           +GD  V  ++AS   A+     R +F +DD +A  ADG +  H
Sbjct: 251 VGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIH 293


>AB016789-1|BAA74731.1|  682|Homo sapiens
           Glutamine:fructose-6-phosphate amidotransferase protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 200 LGDWFVVEYYASAEEALSYSCMRAVFTQDDHVAG-ADGTVECH 325
           +GD  V  ++AS   A+     R +F +DD +A  ADG +  H
Sbjct: 251 VGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIH 293


>DQ333316-1|ABD24032.1| 2881|Homo sapiens PRIC320 isoform 1 protein.
          Length = 2881

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 392 SKQRLANRVISEAVGKIHRYSRCDIP 315
           SKQ  ANR+ISEA+ K       +IP
Sbjct: 521 SKQEKANRIISEAIAKAKERGERNIP 546


>AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.
          Length = 2881

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 392 SKQRLANRVISEAVGKIHRYSRCDIP 315
           SKQ  ANR+ISEA+ K       +IP
Sbjct: 521 SKQEKANRIISEAIAKAKERGERNIP 546


>AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling
           factor CHROM1 protein.
          Length = 2897

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 392 SKQRLANRVISEAVGKIHRYSRCDIP 315
           SKQ  ANR+ISEA+ K       +IP
Sbjct: 521 SKQEKANRIISEAIAKAKERGERNIP 546


>AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein.
          Length = 2759

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 392 SKQRLANRVISEAVGKIHRYSRCDIP 315
           SKQ  ANR+ISEA+ K       +IP
Sbjct: 398 SKQEKANRIISEAIAKAKERGERNIP 423


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,085,290
Number of Sequences: 237096
Number of extensions: 913682
Number of successful extensions: 1723
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)