Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E20
         (398 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66516-9|CAN99713.1|  455|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z66516-8|CAB60308.2|  459|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z50015-2|CAN99700.1|  455|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z50015-1|CAB60292.2|  459|Caenorhabditis elegans Hypothetical pr...    28   2.8  
L39212-1|AAC37255.1|  459|Caenorhabditis elegans transcription f...    28   2.8  
AL021172-3|CAN99704.1|  455|Caenorhabditis elegans Hypothetical ...    28   2.8  
AL021172-2|CAB60307.2|  459|Caenorhabditis elegans Hypothetical ...    28   2.8  

>Z66516-9|CAN99713.1|  455|Caenorhabditis elegans Hypothetical
           protein W03C9.4b protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 94  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 122


>Z66516-8|CAB60308.2|  459|Caenorhabditis elegans Hypothetical
           protein W03C9.4a protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 98  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 126


>Z50015-2|CAN99700.1|  455|Caenorhabditis elegans Hypothetical
           protein W03C9.4b protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 94  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 122


>Z50015-1|CAB60292.2|  459|Caenorhabditis elegans Hypothetical
           protein W03C9.4a protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 98  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 126


>L39212-1|AAC37255.1|  459|Caenorhabditis elegans transcription
           factor protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 98  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 126


>AL021172-3|CAN99704.1|  455|Caenorhabditis elegans Hypothetical
           protein W03C9.4b protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 94  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 122


>AL021172-2|CAB60307.2|  459|Caenorhabditis elegans Hypothetical
           protein W03C9.4a protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 PFIHYLSYHQMNYH*NN*KSHHCFNHFQR 65
           PF H+     +N+H N+   HH F+ F R
Sbjct: 98  PFPHFNQADLLNFHQNSLLPHHMFSQFGR 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,442,885
Number of Sequences: 27780
Number of extensions: 152166
Number of successful extensions: 356
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)