Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E20
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   0.97 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   3.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   3.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   6.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.9  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 186 ICRRCLVTGLSLNTMRALKKH 248
           +C  C V G +L+T   LK+H
Sbjct: 370 VCYTCDVCGKTLSTKLTLKRH 390


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -1

Query: 398 DVSKQRLANRVISEAVGKIHRYSRCDIP 315
           D++   +  R+++  V ++ RY+RC+ P
Sbjct: 387 DLNFNEVNFRILNAPVNQLIRYTRCENP 414


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 164 VRAVPYFDLPQMLGDWFVVEYYASAEEALSYSCMR 268
           V+ V    LP+   + F  +Y  S      YSC++
Sbjct: 198 VQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLK 232


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 164 VRAVPYFDLPQMLGDWFVVEYYASAEEALSYSCMR 268
           V+ V    LP+   + F  +Y  S      YSC++
Sbjct: 198 VQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLK 232


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 195 RCLVTGLSLNTMRALKKHYRT 257
           RC + G +      L +HYRT
Sbjct: 93  RCNICGKTFAVPARLTRHYRT 113


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 336 TMNFTYRFADDPIGE 380
           T+NFTY  A  P G+
Sbjct: 473 TINFTYSLALSPDGQ 487


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 217 DKPVTKHLRQIEVRH 173
           D   + HL+QIE+ H
Sbjct: 159 DLKTSNHLKQIEIPH 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,029
Number of Sequences: 438
Number of extensions: 1625
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)